prot_Ecto-sp13_S_contig902.20577.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig902.20577.1
Unique Nameprot_Ecto-sp13_S_contig902.20577.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length370
Homology
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BLAST of mRNA_Ecto-sp13_S_contig902.20577.1 vs. uniprot
Match: A0A6H5K9R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R7_9PHAE)

HSP 1 Score: 661 bits (1706), Expect = 7.890e-239
Identity = 340/365 (93.15%), Postives = 348/365 (95.34%), Query Frame = 0 
Query:    5 MRLLCWSPYLMVCYLLPAYGFVRQRFSTRIGPEEHRTGYGRRGASTAPPTRPTTIMACAASSTTAVDSSAVEDEDMSCSSFRHCSTVYIEMTDMYRIVYHANYVTYAQRAIEHAFGAPGVRVHGLPIVKYRAAATLGEEIAVQGTLVSCDDSGSGGGRSRWRFELAAASEPSRVFVTAEATVSWPGGAAMPPGVAVSKLSRSAEPTMTDDTELLQPLHEAFTDSPKTLKVVVWSDDLDGGGNLSIRAVLNYFERIRTLSLGRGQDGELGLMRLHREGVSVVVTSISDLRVNSDGLVAGETLDVRLGAKLSRGNRVMTMYESLWRENGTLVAHAEIALFCMDNESRKFRPVPEWVQEAIMLPSAVL 369
            MRLLCWSPYLMVCYLLPA+GFVRQRF TR GPE HRTGYGR G STA  TRPTTI+ACAASSTTAVDSSAVED+ MSCSSFRHCSTVYIEMTDMYRIVYHANYVTYAQRAIEHAFGAPGVRVH LPIVKYRAAATLG+EIAVQGTLVSCDDS SGGGRSRWRFELAAAS+PSRVFVTAEATVSWPGGAAMPPGVAV KL RSAEPTM+DDTELLQPL EAFTD PK LKVVVWSDDLD GGNLSIRAVLNYFERIRTLSLGRGQDGELGLMRLHREGVSVVVTSISDLRVNSDGLVAGETLDVRLGAKLSRGNRVMTMYESLW+ENGTLVAHAEIALFCMDNE+RKFRPVPEWVQ AIMLPSAVL
Sbjct:    1 MRLLCWSPYLMVCYLLPAHGFVRQRFRTRTGPEGHRTGYGRGGTSTATSTRPTTIIACAASSTTAVDSSAVEDKHMSCSSFRHCSTVYIEMTDMYRIVYHANYVTYAQRAIEHAFGAPGVRVHSLPIVKYRAAATLGDEIAVQGTLVSCDDSSSGGGRSRWRFELAAASDPSRVFVTAEATVSWPGGAAMPPGVAVIKLPRSAEPTMSDDTELLQPLPEAFTDPPKALKVVVWSDDLDVGGNLSIRAVLNYFERIRTLSLGRGQDGELGLMRLHREGVSVVVTSISDLRVNSDGLVAGETLDVRLGAKLSRGNRVMTMYESLWKENGTLVAHAEIALFCMDNETRKFRPVPEWVQVAIMLPSAVL 365
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BLAST of mRNA_Ecto-sp13_S_contig902.20577.1 vs. uniprot
Match: D8LB89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB89_ECTSI)

HSP 1 Score: 522 bits (1345), Expect = 2.750e-185
Identity = 267/275 (97.09%), Postives = 269/275 (97.82%), Query Frame = 0 
Query:   95 MTDMYRIVYHANYVTYAQRAIEHAFGAPGVRVHGLPIVKYRAAATLGEEIAVQGTLVSCDDSGSGGGRSRWRFELAAASEPSRVFVTAEATVSWPGGAAMPPGVAVSKLSRSAEPTMTDDTELLQPLHEAFTDSPKTLKVVVWSDDLDGGGNLSIRAVLNYFERIRTLSLGRGQDGELGLMRLHREGVSVVVTSISDLRVNSDGLVAGETLDVRLGAKLSRGNRVMTMYESLWRENGTLVAHAEIALFCMDNESRKFRPVPEWVQEAIMLPSAVL 369
            MTDMYRIVYHANYVTYAQRAIEHAFGAPGVRVH LPIVKYRAAATLGEEI VQGTLVSCDDS SGGGRSRWRFELAAAS+PSRVFVTAEATVSW GGAAMPPGVAVSKL RSAEPTMTDDTELLQPL EAFTDSPKTLKVVVWSDDLDGGGNLSIRAVLNYFERIRTLSLGRGQDGELGLMRLHREGVSVVVTSISDLRVNSDGLVAGETLDVRLGAKLSRGNRVMTMYESLWRENGTLVAHAEIALFCMDNE+RKFRPVPEWVQEAIMLPSAVL
Sbjct:    1 MTDMYRIVYHANYVTYAQRAIEHAFGAPGVRVHSLPIVKYRAAATLGEEITVQGTLVSCDDSSSGGGRSRWRFELAAASDPSRVFVTAEATVSWLGGAAMPPGVAVSKLPRSAEPTMTDDTELLQPLPEAFTDSPKTLKVVVWSDDLDGGGNLSIRAVLNYFERIRTLSLGRGQDGELGLMRLHREGVSVVVTSISDLRVNSDGLVAGETLDVRLGAKLSRGNRVMTMYESLWRENGTLVAHAEIALFCMDNETRKFRPVPEWVQEAIMLPSAVL 275
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BLAST of mRNA_Ecto-sp13_S_contig902.20577.1 vs. uniprot
Match: A0A835YTJ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ2_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.400e-25
Identity = 85/283 (30.04%), Postives = 140/283 (49.47%), Query Frame = 0 
Query:   93 IEMTDMYRIVYHANYVTYAQRAIEHAFGAPGVRVHGLPIVKYRAAATLGEEIAVQGTLVSCDDSGSGGGRSRWRFELAAASEPSRVFVTAEATVSWPGGAAMPPGVAVSKLSRSAEPTMTDDTELLQPLHEAFTDSPKTLKVVVWSDDLDGGGNLSIRAVLNYFERIRTLSLGRGQDGELGLMRLHREGVSVVVTSISDLRVNSDGLVA-GETLDVRLGAKLSRGNRVMTMYESLWRE------NGTLVAHAEIALFCMDNESRKFRPVPEWVQEAIMLPSAV 368
            +E TDM+  +YH NY+ +  RA +   G   V + G+  ++YR AA LG+ + + GT    +D+        W+  +  A    RVFVTA   +          G A S    SA          L    E+   S +   +V + D+L   G LS  +V+NY ER RTLSLG  ++G   L RLH++G  +V++ ISDLR++    +A G  L+V      +R  R +++ + ++ +         L+AHA + L C+D  ++K    P+W+ E + + S++
Sbjct:   58 VEDTDMFGHMYHGNYIKWLARASQKCLGHDTVLI-GVDALRYRNAAVLGDNMVISGTF--SEDA------QAWQCSVVDARNEKRVFVTASVLL----------GTASSDAGASA----------LAGKVESVPQSAQYFDMVAYGDELGADGALSPSSVINYMERTRTLSLGPPEEG---LYRLHKQGTDIVISRISDLRLDHTVRIAPGAELEVVNSGSANR--RTVSVRQRVYVKAPDEVSGRRLIAHATVELLCIDGATKKLSAFPDWILERLHVISSI 306
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig902.20577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K9R7_9PHAE7.890e-23993.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB89_ECTSI2.750e-18597.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YTJ2_9STRA2.400e-2530.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.129.10coord: 79..199
e-value: 5.7E-11
score: 44.4
NoneNo IPR availableGENE3D3.10.129.10coord: 230..367
e-value: 9.8E-13
score: 49.9
NoneNo IPR availablePANTHERPTHR31793FAMILY NOT NAMEDcoord: 232..362
coord: 83..153
NoneNo IPR availablePANTHERPTHR31793:SF9ACYL-COA THIOESTER HYDROLASE YBGCcoord: 232..362
coord: 83..153
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..369
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
IPR029069HotDog domain superfamilySUPERFAMILY54637Thioesterase/thiol ester dehydrase-isomerasecoord: 83..188
IPR029069HotDog domain superfamilySUPERFAMILY54637Thioesterase/thiol ester dehydrase-isomerasecoord: 224..361

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig902contigEcto-sp13_S_contig902:6104..8489 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig902.20577.1mRNA_Ecto-sp13_S_contig902.20577.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig902 5992..8761 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig902.20577.1 ID=prot_Ecto-sp13_S_contig902.20577.1|Name=mRNA_Ecto-sp13_S_contig902.20577.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=370bp
MNLTMRLLCWSPYLMVCYLLPAYGFVRQRFSTRIGPEEHRTGYGRRGAST
APPTRPTTIMACAASSTTAVDSSAVEDEDMSCSSFRHCSTVYIEMTDMYR
IVYHANYVTYAQRAIEHAFGAPGVRVHGLPIVKYRAAATLGEEIAVQGTL
VSCDDSGSGGGRSRWRFELAAASEPSRVFVTAEATVSWPGGAAMPPGVAV
SKLSRSAEPTMTDDTELLQPLHEAFTDSPKTLKVVVWSDDLDGGGNLSIR
AVLNYFERIRTLSLGRGQDGELGLMRLHREGVSVVVTSISDLRVNSDGLV
AGETLDVRLGAKLSRGNRVMTMYESLWRENGTLVAHAEIALFCMDNESRK
FRPVPEWVQEAIMLPSAVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029069HotDog_dom_sf