mRNA_Ecto-sp13_S_contig902.20576.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig902.20576.1 vs. uniprot
Match: A0A6H5KCE4_9PHAE (ABM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCE4_9PHAE) HSP 1 Score: 311 bits (798), Expect = 2.560e-103 Identity = 160/167 (95.81%), Postives = 164/167 (98.20%), Query Frame = 2
Query: 2 TPPNMRYIAMNRFKVKLGCEGEFETMWRERESKLASFSGFEQFMLLRLDTREAEKKEEEEGAPAARPGYTEFVSHTTWAHQMDFEEWKRSQAFKKSHGGXXXXXXXXXXELGGFVVVAGGMGKMRELIVEPPVPSLYNAPIVEPVPPEHQGGLWDFEEEPSYFDGDM 502
TPPNMRYIAMNRFKVKLGCE EFETMWRERESKLASFSGFEQFMLLR+DTREAEKKEEEEGAPAARPGYTEFVSHTTWAHQMDFEEWKRSQAFKKSHGGXXXXXXXXXXELGGFVV AGGMGKMR+LI+EPPVPSLYNA IVEPVPPEHQGGLWDFE+EPSYFDGDM
Sbjct: 69 TPPNMRYIAMNRFKVKLGCEEEFETMWRERESKLASFSGFEQFMLLRVDTREAEKKEEEEGAPAARPGYTEFVSHTTWAHQMDFEEWKRSQAFKKSHGGXXXXXXXXXXELGGFVVAAGGMGKMRDLIMEPPVPSLYNAAIVEPVPPEHQGGLWDFEDEPSYFDGDM 235
BLAST of mRNA_Ecto-sp13_S_contig902.20576.1 vs. uniprot
Match: D8LB88_ECTSI (Antibiotic biosynthesis monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB88_ECTSI) HSP 1 Score: 253 bits (647), Expect = 8.380e-82 Identity = 122/142 (85.92%), Postives = 126/142 (88.73%), Query Frame = 2
Query: 77 MWRERESKLASFSGFEQFMLLRLDTREAEKKEEEEGAPAARPGYTEFVSHTTWAHQMDFEEWKRSQAFKKSHGGXXXXXXXXXXELGGFVVVAGGMGKMRELIVEPPVPSLYNAPIVEPVPPEHQGGLWDFEEEPSYFDGDM 502
MWRERESKLASFSGFEQFMLLRLDTRE EK EEEEGAPAARPGYTEFVSHT+WAHQMDFEEWK SQAFKK H G E GGFVVVAGGMGK+RELIVEPPVPSLYNAPI+EPVPPEHQGGLWDFE+EPSYFDGDM
Sbjct: 1 MWRERESKLASFSGFEQFMLLRLDTREVEKNEEEEGAPAARPGYTEFVSHTSWAHQMDFEEWKNSQAFKKGHSGGGGGEGKAKGESGGFVVVAGGMGKIRELIVEPPVPSLYNAPIIEPVPPEHQGGLWDFEDEPSYFDGDM 142
BLAST of mRNA_Ecto-sp13_S_contig902.20576.1 vs. uniprot
Match: A0A835YW22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW22_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 6.640e-21 Identity = 60/168 (35.71%), Postives = 86/168 (51.19%), Query Frame = 2
Query: 14 MRYIAMNRFKVKLGCEGEFETMWRERESKLASFSGFEQFMLLRLDTREAEKKEEEEGAPAARPGYTEFVSHTTWAHQMDFEEW--KRSQAFKKSHGGXXXXXXXXXXELGGFVVVAGGMGKMRELIVEPPVPSLYNAPIVEPVPPEHQ---GGLWDFEEEPSYFDGDM 502
MR++ + FKVK+G E +FE WRER+ L SGF FML+R E + E +EG AR G+ F + T W H+MDF++W K+ KK GF+ ++ + +++ PP LY + P E GGL+D+EE P YFDGD+
Sbjct: 1 MRFVVKDTFKVKIGNEEKFEEFWRERKLSLEGQSGFSSFMLVR---GEDDFDETQEGGRLARDGFATFETTTVWLHRMDFDDWRSKKDSPDKKR----------------GFLAMSAE--DVAAMLLAPPEQRLYETVVTLPKAAEENVRLGGLFDWEENPDYFDGDL 147
BLAST of mRNA_Ecto-sp13_S_contig902.20576.1 vs. uniprot
Match: A0A2W4AY73_9HYPH (Antibiotic biosynthesis monooxygenase n=7 Tax=Rhizobium TaxID=379 RepID=A0A2W4AY73_9HYPH) HSP 1 Score: 93.2 bits (230), Expect = 5.470e-20 Identity = 46/91 (50.55%), Postives = 57/91 (62.64%), Query Frame = 2
Query: 20 YIAMNRFKVKLGCEGEFETMWRERESKLASFSGFEQFMLLRLDTREAEKKEEEEGAPAARPGYTEFVSHTTWAHQMDFEEWKRSQAFKKSH 292
YIAMNRFKV +G E EFE++WR R+S L GF +F LLR T E E GYT F SHTTWA++ DF W +S++F+KSH
Sbjct: 2 YIAMNRFKVAVGSEAEFESIWRNRDSSLPEVPGFVEFRLLRSKTNEDE-------------GYTLFSSHTTWANEADFINWTKSESFRKSH 79
BLAST of mRNA_Ecto-sp13_S_contig902.20576.1 vs. uniprot
Match: A0A1I3KI52_9HYPH (Heme-degrading monooxygenase HmoA n=1 Tax=Aquamicrobium aerolatum DSM 21857 TaxID=1121003 RepID=A0A1I3KI52_9HYPH) HSP 1 Score: 92.4 bits (228), Expect = 1.060e-19 Identity = 46/91 (50.55%), Postives = 56/91 (61.54%), Query Frame = 2
Query: 20 YIAMNRFKVKLGCEGEFETMWRERESKLASFSGFEQFMLLRLDTREAEKKEEEEGAPAARPGYTEFVSHTTWAHQMDFEEWKRSQAFKKSH 292
YIAMNRFKVK+G E +FE +WR R+S L+S GF +F LLR T EAE GYT + SHT W Q DF W +SQ+F+ SH
Sbjct: 2 YIAMNRFKVKIGLETDFEDVWRNRDSSLSSMKGFREFHLLRGATHEAE-------------GYTLYASHTVWESQDDFTAWTKSQSFRDSH 79
BLAST of mRNA_Ecto-sp13_S_contig902.20576.1 vs. uniprot
Match: A0A1G4QMT1_9HYPH (Heme-degrading monooxygenase HmoA n=6 Tax=Xanthobacteraceae TaxID=335928 RepID=A0A1G4QMT1_9HYPH) HSP 1 Score: 90.1 bits (222), Expect = 8.910e-19 Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 2
Query: 20 YIAMNRFKVKLGCEGEFETMWRERESKLASFSGFEQFMLLRLDTREAEKKEEEEGAPAARPGYTEFVSHTTWAHQMDFEEWKRSQAFKKSHG 295
++AMNRFKVKLG E +FET+WRER+S L + GF+ F LLR T++ +T + SH+ WA + DFE W RS+AF+K+HG
Sbjct: 2 FLAMNRFKVKLGSEADFETVWRERDSHLRTVPGFKTFNLLRGPTKD---------------DHTLYASHSVWASRADFEAWTRSEAFRKAHG 78
BLAST of mRNA_Ecto-sp13_S_contig902.20576.1 vs. uniprot
Match: UPI001BCBBF31 (antibiotic biosynthesis monooxygenase n=1 Tax=Ancylobacter dichloromethanicus TaxID=518825 RepID=UPI001BCBBF31) HSP 1 Score: 90.1 bits (222), Expect = 8.910e-19 Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 2
Query: 20 YIAMNRFKVKLGCEGEFETMWRERESKLASFSGFEQFMLLRLDTREAEKKEEEEGAPAARPGYTEFVSHTTWAHQMDFEEWKRSQAFKKSHG 295
++AMNRFKVKLG E +FET+WRER+S L + GF+ F LLR T++ +T + SH+ WA + DFE W RS+AF+K+HG
Sbjct: 2 FLAMNRFKVKLGSEADFETVWRERDSHLRTVPGFKSFHLLRGPTKD---------------DHTLYASHSQWASRADFEAWTRSEAFRKAHG 78
BLAST of mRNA_Ecto-sp13_S_contig902.20576.1 vs. uniprot
Match: A0A1M3MJ44_9HYPH (Antibiotic biosynthesis monooxygenase n=1 Tax=Rhizobiales bacterium 63-22 TaxID=1895812 RepID=A0A1M3MJ44_9HYPH) HSP 1 Score: 87.4 bits (215), Expect = 7.830e-18 Identity = 43/91 (47.25%), Postives = 56/91 (61.54%), Query Frame = 2
Query: 20 YIAMNRFKVKLGCEGEFETMWRERESKLASFSGFEQFMLLRLDTREAEKKEEEEGAPAARPGYTEFVSHTTWAHQMDFEEWKRSQAFKKSH 292
+IAMNRF+V++G E +FET+WR R+SKL GFE F LLR T EAE GYT + SHT W + DF W RS+ F+++H
Sbjct: 2 FIAMNRFRVRVGSEADFETVWRNRDSKLNELPGFESFHLLRGATNEAE-------------GYTLYASHTVWKSREDFLFWTRSEQFREAH 79
BLAST of mRNA_Ecto-sp13_S_contig902.20576.1 vs. uniprot
Match: A0A2W4CML5_9HYPH (Antibiotic biosynthesis monooxygenase n=1 Tax=Rhizobium tubonense TaxID=484088 RepID=A0A2W4CML5_9HYPH) HSP 1 Score: 87.4 bits (215), Expect = 7.830e-18 Identity = 43/91 (47.25%), Postives = 54/91 (59.34%), Query Frame = 2
Query: 20 YIAMNRFKVKLGCEGEFETMWRERESKLASFSGFEQFMLLRLDTREAEKKEEEEGAPAARPGYTEFVSHTTWAHQMDFEEWKRSQAFKKSH 292
YIAMNRFKV +G E EFE++WR R+S+L GF +F LLR T E E GYT F SHT W + DF+ W RS+ F+ +H
Sbjct: 2 YIAMNRFKVAVGSENEFESIWRNRDSRLPEVPGFVEFRLLRSKTNEEE-------------GYTLFSSHTIWRSEDDFQNWTRSENFRSAH 79
BLAST of mRNA_Ecto-sp13_S_contig902.20576.1 vs. uniprot
Match: A0A364JT54_9HYPH (Heme-degrading monooxygenase HmoA n=1 Tax=Falsochrobactrum ovis TaxID=1293442 RepID=A0A364JT54_9HYPH) HSP 1 Score: 86.7 bits (213), Expect = 1.510e-17 Identity = 43/91 (47.25%), Postives = 54/91 (59.34%), Query Frame = 2
Query: 20 YIAMNRFKVKLGCEGEFETMWRERESKLASFSGFEQFMLLRLDTREAEKKEEEEGAPAARPGYTEFVSHTTWAHQMDFEEWKRSQAFKKSH 292
+IAMNRFKV +G E EFE +WR R+SKL+ GFE F LLR +T E E GYT + SHT W + DF W +S+ F+ SH
Sbjct: 2 FIAMNRFKVNIGKETEFEALWRNRDSKLSELPGFESFHLLRGETNEKE-------------GYTLYSSHTVWRSKEDFTFWTKSEQFRSSH 79 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig902.20576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig902.20576.1 >prot_Ecto-sp13_S_contig902.20576.1 ID=prot_Ecto-sp13_S_contig902.20576.1|Name=mRNA_Ecto-sp13_S_contig902.20576.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=164bp MRYIAMNRFKVKLGCEGEFETMWRERESKLASFSGFEQFMLLRLDTREAEback to top mRNA from alignment at Ecto-sp13_S_contig902:2522..5729+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig902.20576.1 ID=mRNA_Ecto-sp13_S_contig902.20576.1|Name=mRNA_Ecto-sp13_S_contig902.20576.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3208bp|location=Sequence derived from alignment at Ecto-sp13_S_contig902:2522..5729+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig902:2522..5729+ >mRNA_Ecto-sp13_S_contig902.20576.1 ID=mRNA_Ecto-sp13_S_contig902.20576.1|Name=mRNA_Ecto-sp13_S_contig902.20576.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=492bp|location=Sequence derived from alignment at Ecto-sp13_S_contig902:2522..5729+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |