prot_Ecto-sp13_S_contig9019.20574.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9019.20574.1
Unique Nameprot_Ecto-sp13_S_contig9019.20574.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length625
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9019.20574.1 vs. uniprot
Match: D7FRR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR7_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 4.350e-63
Identity = 148/310 (47.74%), Postives = 162/310 (52.26%), Query Frame = 0 
Query:   10 VPANDPSSNAQPREVFNSGDGEADQARGGGLGEPSSSSRSSPDEEDIGEDSDPARESLPRGDSQWRPRRKAITARNNLLLSPDASSNGEVHSRVSPSRGTVRHRPGHYDSRGPPPQHARLDWDIEARGRTSGNGQGNDDVSDGLFSSSVGNERGGEAFPEADGVADFDDAPSEMHCGGYTFDGAFDGVTASPLEDDVEEREDNVQDLRGGNVSHVVGLGGGVEEAKGEGCTEDPGNVIGTRECTVDERLWCRQDGCPYSVDGVGEDGSGGDSVTVGAGASAAGVHRLKRGRTCEQGPVQDTQTHGSATLQ 319
            +PA DPS    P    N+GD EAD+A GGG  EPS+SS S  DEEDI  DSD ARES  RGD++WRP R+   ARN                                                    + SGNGQ +DDV D LFSSSV N+ GG AFPEADGVADFDDAPSEM CG Y+FDG FDGV                                                     E TVDERLWCRQ+GCPYSVDG+G DGS GDSV  GAGA+AAGVHRLKRGRT EQGP QDTQT GSATLQ
Sbjct:   31 IPALDPS----PPPDVNTGDDEADEAPGGGFREPSTSSFSGSDEEDIDGDSDAARESPLRGDAKWRPWRRVDMARN----------------------------------------------------KYSGNGQEDDDVGDALFSSSVCNQGGGAAFPEADGVADFDDAPSEMDCGDYSFDGGFDGVATRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTVDERLWCRQNGCPYSVDGLGGDGSSGDSVIAGAGANAAGVHRLKRGRTYEQGPFQDTQTDGSATLQ 284
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9019.20574.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRR7_ECTSI4.350e-6347.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9019contigEcto-sp13_S_contig9019:3969..5843 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9019.20574.1mRNA_Ecto-sp13_S_contig9019.20574.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9019 3969..5843 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9019.20574.1 ID=prot_Ecto-sp13_S_contig9019.20574.1|Name=mRNA_Ecto-sp13_S_contig9019.20574.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=625bp
ESQQQTQERVPANDPSSNAQPREVFNSGDGEADQARGGGLGEPSSSSRSS
PDEEDIGEDSDPARESLPRGDSQWRPRRKAITARNNLLLSPDASSNGEVH
SRVSPSRGTVRHRPGHYDSRGPPPQHARLDWDIEARGRTSGNGQGNDDVS
DGLFSSSVGNERGGEAFPEADGVADFDDAPSEMHCGGYTFDGAFDGVTAS
PLEDDVEEREDNVQDLRGGNVSHVVGLGGGVEEAKGEGCTEDPGNVIGTR
ECTVDERLWCRQDGCPYSVDGVGEDGSGGDSVTVGAGASAAGVHRLKRGR
TCEQGPVQDTQTHGSATLQVGWREMDVGRSRFHYGGGAGDPSPDGQGLAD
PQSNGRDTSVGRLGREMFHGGGADDPGPEGNAKYSCEGGVDGSGCGCGGS
CCRVNGSDSGGHGMGTGRTEATSPGDRGVEGGSIQKGYRSRGRGEDTQRR
ATPRMAHEALLVGGGDGLKLNDNMDRGSETAGRACVRGGSSASEGRASGR
PRSGLARPGETGSGSAARSSSVRVPRVILEPQSMIRLHGAGVNVTAANVR
LQSKADAIRKMARTVALRRKNEFGRRTGLTWSAKPDGGKGRARPGGKLCP
TPDAVYEAIWEKYGSAWERSVFQK*
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