mRNA_Ecto-sp13_S_contig9016.20572.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9016.20572.1 vs. uniprot
Match: D7FJ57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ57_ECTSI) HSP 1 Score: 293 bits (749), Expect = 2.510e-98 Identity = 159/175 (90.86%), Postives = 164/175 (93.71%), Query Frame = 1
Query: 1 MGKGGKTAXXXXXXXXXXXXXXASSRVEPNVAHGVRVTLAYLVLYYCFIVAQVSMKRKQRAHNAAHGKKFDRYFSRDRKMLGWDRTVGNMLEQMGPFLSLFWSNIWLSPYGGLPCVYIAALGWLYVLLRFFYPMLWFAGGGGSGGTSPTIWKVTMPMYAIILVFAVNAAVVIYGA 525
MGKGGK AXXXXXXXXXXXXX SSRV PNV HGVRVTLAYLVLYYCFI+AQ SMKRK RA+NAAHGKKFDRYFSRDRKMLGWDRTVGNMLEQMGPFLSLFWSNIWLSPYGGLP YIAALGWLYVLLR FYPMLWFAGGGGSGGTSPTIW+VTMPMY IILVFAVN+A+VIYGA
Sbjct: 73 MGKGGK-AXXXXXXXXXXXXXETSSRVGPNVVHGVRVTLAYLVLYYCFIIAQGSMKRKLRAYNAAHGKKFDRYFSRDRKMLGWDRTVGNMLEQMGPFLSLFWSNIWLSPYGGLPHAYIAALGWLYVLLRSFYPMLWFAGGGGSGGTSPTIWRVTMPMYVIILVFAVNSAIVIYGA 246
BLAST of mRNA_Ecto-sp13_S_contig9016.20572.1 vs. uniprot
Match: A0A6H5L6X6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6X6_9PHAE) HSP 1 Score: 287 bits (734), Expect = 4.100e-97 Identity = 158/175 (90.29%), Postives = 161/175 (92.00%), Query Frame = 1
Query: 1 MGKGGKTAXXXXXXXXXXXXXXASSRVEPNVAHGVRVTLAYLVLYYCFIVAQVSMKRKQRAHNAAHGKKFDRYFSRDRKMLGWDRTVGNMLEQMGPFLSLFWSNIWLSPYGGLPCVYIAALGWLYVLLRFFYPMLWFAGGGGSGGTSPTIWKVTMPMYAIILVFAVNAAVVIYGA 525
MGKGGK AXXXXXXXXXXXX SSRV PNV HGVRVTLAYLVLYY FIVAQ SMKRK RA+NAAHGKKFDRYFSRDRKMLGWDRTVGNMLEQMGPFLSLFWSNIWLSPYGGLP YIAALGWLYVLLR FYPMLWFAGGGGS GTSPTIW+VTMPMY IILVFAVNAA+VIYGA
Sbjct: 1 MGKGGK-AXXXXXXXXXXXXEETSSRVGPNVVHGVRVTLAYLVLYYFFIVAQGSMKRKLRAYNAAHGKKFDRYFSRDRKMLGWDRTVGNMLEQMGPFLSLFWSNIWLSPYGGLPHAYIAALGWLYVLLRSFYPMLWFAGGGGSEGTSPTIWRVTMPMYVIILVFAVNAAIVIYGA 174
BLAST of mRNA_Ecto-sp13_S_contig9016.20572.1 vs. uniprot
Match: D7FJ72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ72_ECTSI) HSP 1 Score: 126 bits (317), Expect = 1.110e-32 Identity = 63/141 (44.68%), Postives = 87/141 (61.70%), Query Frame = 1
Query: 82 EPNVAHGVRVTLAYLVLYYCFIVAQVSMKRKQRAHNAAHGKKFDRYFS-RDRKMLGWDRTVGNMLEQMGPFLSLFWSNIWLSPYGGLPCVYIAALGWLYVLLRFFYPMLWFAGGGGSGGTSPTIWKVTMPMYAIILVFAVN 501
EP + GV VT AY++++Y I+ Q S K K A A G++F+RY++ +D+ ML WDR VGN+LEQ PFL+LFW NI L+ G +A GW+YV+ R YP++W +GGGG G I VT MY +I+ N
Sbjct: 123 EPAIRQGVYVTAAYVLVFYACIIGQASAKWKVAASYRARGERFERYYNVKDKAMLAWDRIVGNLLEQAMPFLTLFWLNIGLAALGATSHTGVAIAGWIYVVFRALYPVMWLSGGGGRAGPRSKILFVTPVMYLVIIYLVGN 263
BLAST of mRNA_Ecto-sp13_S_contig9016.20572.1 vs. uniprot
Match: A0A6H5JQ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ30_9PHAE) HSP 1 Score: 116 bits (290), Expect = 4.580e-30 Identity = 57/131 (43.51%), Postives = 80/131 (61.07%), Query Frame = 1
Query: 82 EPNVAHGVRVTLAYLVLYYCFIVAQVSMKRKQRAHNAAHGKKFDRYFS-RDRKMLGWDRTVGNMLEQMGPFLSLFWSNIWLSPYGGLPCVYIAALGWLYVLLRFFYPMLWFAGGGGSGGTSPTIWKVTMPM 471
EP + GV +T Y++++Y I+ Q S K A A G++F+RY++ +D+ ML WDR VGN+LEQ PFL+LFW NI L+ G +A GW+YV+ R YP++W +GGGG G I VT M
Sbjct: 15 EPAIRQGVYITAVYVLVFYACIIGQASAMWKVAASYRARGERFERYYNVKDKAMLAWDRIVGNLLEQAMPFLTLFWLNIGLAALGATSHTGVAIAGWIYVVFRALYPVMWLSGGGGRAGPRSKILFVTPVM 145
BLAST of mRNA_Ecto-sp13_S_contig9016.20572.1 vs. uniprot
Match: W4G4R8_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G4R8_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 6.210e-15 Identity = 55/142 (38.73%), Postives = 78/142 (54.93%), Query Frame = 1
Query: 88 NVAH--GVRVTLAYLVLYYCFIVAQVSMK-------RKQRAHNAAHGKKFDRYFSRDRKMLGWDRTVGNMLEQMGPFLSLFWSNIWLSPYGGLPCVYIAALGWLYVLLRFFYPMLWFAGGGGSGGTSPTIWKVTMPMYAIIL 486
++AH G RV L Y+ + IV Q K +K +A + ++F+RY S ML DR+VGN +E G FL LFW+NI ++ G V+ LGW+YV +RF YP+L + GG GG P I T+P Y ++L
Sbjct: 3 DLAHLEGARVMLGYVASFLFAIVMQAVSKFSAMNRHKKDKADEKSK-ERFNRYTSDT--MLAGDRSVGNFVEWQGAFLVLFWTNIVVA---GAKEVW---LGWVYVGIRFLYPVLAYLGGVKQGGAQPLILLATVPGYYVLL 135
BLAST of mRNA_Ecto-sp13_S_contig9016.20572.1 vs. uniprot
Match: A0A024UA51_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UA51_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 8.740e-15 Identity = 56/146 (38.36%), Postives = 77/146 (52.74%), Query Frame = 1
Query: 100 GVRVTLAYLVLYYCFIVAQVSMK---RKQRAHNAAHG---KKFDRYFSRDRKMLGWDRTVGNMLEQMGPFLSLFWSNIWLSPYGGLPCVYIAALGWLYVLLRFFYPMLWFAGGGGSGGTSPTIWKVTMPMYAIILVFAVNAAVVIY 519
G RV L Y+ + IV QV K KQ + A G ++F+RY S ML DR+VGN +E G FL LFW+NI + G V+ LGW+YV +RF YP+L + GG G P I+ T+P Y ++ + V +Y
Sbjct: 9 GARVMLGYVASFLFAIVMQVFSKLSAMKQHKKDKASGASKERFNRYTSD--LMLAGDRSVGNFVEWQGAFLVLFWTNIVAA---GAKEVW---LGWVYVGIRFAYPILAYLGGIKQSGAQPLIFLATLPGYYVLFRYMYLIYVAVY 146
BLAST of mRNA_Ecto-sp13_S_contig9016.20572.1 vs. uniprot
Match: A0A7S0VSU9_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VSU9_9CRYP) HSP 1 Score: 77.0 bits (188), Expect = 1.030e-14 Identity = 51/133 (38.35%), Postives = 70/133 (52.63%), Query Frame = 1
Query: 106 RVTLAYLVLYYCFIVAQVS-----MKRKQRAHNAAHGKKFDRYFSRDRKMLGWDRTVGNMLEQMGPFLSLFWSN-IWLSPYGGLPCVYIAALGWLYVLLRFFYPMLWFAGGGGSGGTSPTIWKVTMPMYAIIL 486
RVT+AY V+YY FI+ Q ++RK++A G+K S D+ + WDRTVGN LEQ GPFL W N +++ P ALGW YV R +YP+++ G+ +W T P Y IL
Sbjct: 21 RVTVAYFVMYYAFILTQAFNRLNVIRRKKKAEK--EGRKAGPV-SEDKGQMRWDRTVGNTLEQQGPFLWGLWLNALFVGPGTA------EALGWAYVACRLYYPLVY----PSVSGSRVLLWTSTFPNYWAIL 140
BLAST of mRNA_Ecto-sp13_S_contig9016.20572.1 vs. uniprot
Match: F2U8C2_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U8C2_SALR5) HSP 1 Score: 75.1 bits (183), Expect = 5.900e-14 Identity = 50/138 (36.23%), Postives = 69/138 (50.00%), Query Frame = 1
Query: 82 EPNVAHGVRVTLAYLVLYYCFIVAQVSMKRKQRAHNAAHGKKFDRYFS-RDRKMLGWDRTVGNMLEQMGPFLSLFWSNIWLSPYG----GLPCVYIAALGWLYVLLRFFYPMLWFAGGGGSGGTSPTIWKVTMPMYAI 480
E + HGV TL Y VLY+ ++ Q R+ K F +Y++ DR++L DR VGN LEQM FL+L+W I+ S G P +A G++YVL R Y LW G G P + T+P Y +
Sbjct: 5 EFALRHGVYATLMYFVLYFALLLNQSFTGRRLAIKYRKLKKPFSKYYNVTDRELLRADRAVGNTLEQMPVFLTLYWLAIFASSIKNTGTGTPSS-VALSGYVYVLGRLLYLPLWLISGSSPRGLHPMVLISTVPCYLV 141
BLAST of mRNA_Ecto-sp13_S_contig9016.20572.1 vs. uniprot
Match: A0A418B2T3_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B2T3_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.230e-13 Identity = 54/134 (40.30%), Postives = 73/134 (54.48%), Query Frame = 1
Query: 100 GVRVTLAYLVLYYCFIVAQVSMK---RKQRAHNAAHG---KKFDRYFSRDRKMLGWDRTVGNMLEQMGPFLSLFWSNIWLSPYGGLPCVYIAALGWLYVLLRFFYPMLWFAGGGGSGGTSPTIWKVTMPMYAII 483
G RV L Y+ + IV QV K KQ + A G ++F+RY S ML DR+VGN +E G FL LFW+NI + G V+ LGW+YV +RF YP+L + GG G P I+ T+P Y ++
Sbjct: 9 GARVMLGYVASFLFAIVMQVFSKLSAMKQHKKDKASGASKERFNRYTSD--LMLAGDRSVGNFVEWQGAFLVLFWTNIVAA---GAKEVW---LGWVYVGIRFAYPILAYLGGIKQSGAQPLIFLATLPGYYVL 134
BLAST of mRNA_Ecto-sp13_S_contig9016.20572.1 vs. uniprot
Match: A0A7S0TSQ8_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TSQ8_HEMAN) HSP 1 Score: 71.2 bits (173), Expect = 1.530e-12 Identity = 49/132 (37.12%), Postives = 68/132 (51.52%), Query Frame = 1
Query: 103 VRVTLAYLVLYYCFIVAQVSMKRK---QRAHNAAHGKKFDRYFSRDRKMLGWDRTVGNMLEQMGPFLSLFWSN-IWLSPYGGLPCVYIAALGWLYVLLRFFYPMLWFAGGGGSGGTSPTIWKVTMPMYAIIL 486
VRVTLAY V+YY FI+ Q + K Q+ G+K S+D+ + WDRTVGN LEQ PFL W N +++ P LGW YV+ R FYP ++ + P ++ T P Y +I+
Sbjct: 20 VRVTLAYFVMYYVFILTQAFNRIKVIRQKKKAEKEGRKVVPV-SQDKGQMRWDRTVGNTLEQQNPFLWGLWLNALFVGPGTA------EMLGWAYVICRLFYPFVFPL-------SRPLLYTSTFPNYWVII 137 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9016.20572.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9016.20572.1 >prot_Ecto-sp13_S_contig9016.20572.1 ID=prot_Ecto-sp13_S_contig9016.20572.1|Name=mRNA_Ecto-sp13_S_contig9016.20572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=88bp MARSSTATSAGIGKCWGGIEQWVTCWSRWGPSCHCFGRTSGSRRTEDCLAback to top mRNA from alignment at Ecto-sp13_S_contig9016:80..1958- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9016.20572.1 ID=mRNA_Ecto-sp13_S_contig9016.20572.1|Name=mRNA_Ecto-sp13_S_contig9016.20572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1879bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9016:80..1958- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9016:80..1958- >mRNA_Ecto-sp13_S_contig9016.20572.1 ID=mRNA_Ecto-sp13_S_contig9016.20572.1|Name=mRNA_Ecto-sp13_S_contig9016.20572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=264bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9016:80..1958- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |