mRNA_Ecto-sp13_S_contig9013.20568.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9013.20568.1
Unique NamemRNA_Ecto-sp13_S_contig9013.20568.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9013.20568.1 vs. uniprot
Match: D8LG26_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG26_ECTSI)

HSP 1 Score: 612 bits (1579), Expect = 4.230e-215
Identity = 303/321 (94.39%), Postives = 309/321 (96.26%), Query Frame = 1
Query:    1 ILQTAHLFGCGWYMLATLLRTECEDLYFDGLPEGEFVF----EYDVGDYIASECPWIYRNDYVALSVGRRYLGSVYWALTTLTTVGYGDLSARTPAEQIYSMAVQIVGVSWYGYIVGTWASILNSFDRKDKEQRSKMREVVAFSKAAGLPPEMAKKVRQHFRFALYRQDNWITFNEQELVSDMPAGLRADVITYVHANLIAQIPWLEGKDKNFVADVVVMLKPRLFMAGDVLYSRGSQPEEMFFIASGLVMLKYKQERVGFLRHGQMAGLIGLVSSEKHRITAVVAQKDAHCHGLSRANFMMLEESYPKEMEELREAAKSL 951
            ++ TAHLFGCGWYMLATLL TECEDLYF+GLPEGEFVF    EY  GDYIASECPWIYRNDYVALS+GRRYLGSVYWALTTLTTVGYGDLSARTP EQIYSMAVQIVGVSWYGYIVGTWASILNSFDRKDKEQRSKMREVVAFSKAAGLPPEMAKKVRQHFRFALYRQDNWITFNEQELVSDMPAGLRADVITYVHANLIAQIPWLEGKDKNFVADVV++LKPRLFMAGDVLYSRGSQPEEMFFIASGLVMLKYKQERVGFLRHGQMAGLIGL SSEKHRITAVVAQKDAHCHGLSRANF ML ESYPKEMEELREAAKSL
Sbjct:  386 VVVTAHLFGCGWYMLATLLSTECEDLYFEGLPEGEFVFANGLEYTAGDYIASECPWIYRNDYVALSMGRRYLGSVYWALTTLTTVGYGDLSARTPPEQIYSMAVQIVGVSWYGYIVGTWASILNSFDRKDKEQRSKMREVVAFSKAAGLPPEMAKKVRQHFRFALYRQDNWITFNEQELVSDMPAGLRADVITYVHANLIAQIPWLEGKDKNFVADVVIVLKPRLFMAGDVLYSRGSQPEEMFFIASGLVMLKYKQERVGFLRHGQMAGLIGLASSEKHRITAVVAQKDAHCHGLSRANFTMLVESYPKEMEELREAAKSL 706          
BLAST of mRNA_Ecto-sp13_S_contig9013.20568.1 vs. uniprot
Match: A0A6H5J6P9_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6P9_9PHAE)

HSP 1 Score: 609 bits (1570), Expect = 2.960e-214
Identity = 295/317 (93.06%), Postives = 309/317 (97.48%), Query Frame = 1
Query:    1 ILQTAHLFGCGWYMLATLLRTECEDLYFDGLPEGEFVFEYDVGDYIASECPWIYRNDYVALSVGRRYLGSVYWALTTLTTVGYGDLSARTPAEQIYSMAVQIVGVSWYGYIVGTWASILNSFDRKDKEQRSKMREVVAFSKAAGLPPEMAKKVRQHFRFALYRQDNWITFNEQELVSDMPAGLRADVITYVHANLIAQIPWLEGKDKNFVADVVVMLKPRLFMAGDVLYSRGSQPEEMFFIASGLVMLKYKQERVGFLRHGQMAGLIGLVSSEKHRITAVVAQKDAHCHGLSRANFMMLEESYPKEMEELREAAKSL 951
            ++ TAHLFGCGWYMLATLLRTEC+DLYFDGL E + +F+YDVG+YIASECPWIYRNDYVALSVGRRYLGSVYWALTTLTTVGYGD+SARTPAEQIYSMAVQIVGVSWYGY+VGTW  ILNSFDRKDKEQRSKMREVVAFSKAAGLPP+MAKKVRQHFRFALYRQDNWITFNEQELVSDMPAGLRADVITYVHANLIAQIPWLEGKDKNFVADVVVMLKPRLFMAGDVLYSRGSQP+EMFFIASGLVMLKYKQERVGFLRHGQMAGLIGLVSSE+HRITAVVAQKDAHCHGLSRANF+ML E+YPKEMEEL EAAKSL
Sbjct:  176 VVMTAHLFGCGWYMLATLLRTECDDLYFDGLAEEDLIFDYDVGEYIASECPWIYRNDYVALSVGRRYLGSVYWALTTLTTVGYGDISARTPAEQIYSMAVQIVGVSWYGYVVGTWGFILNSFDRKDKEQRSKMREVVAFSKAAGLPPDMAKKVRQHFRFALYRQDNWITFNEQELVSDMPAGLRADVITYVHANLIAQIPWLEGKDKNFVADVVVMLKPRLFMAGDVLYSRGSQPDEMFFIASGLVMLKYKQERVGFLRHGQMAGLIGLVSSERHRITAVVAQKDAHCHGLSRANFVMLMENYPKEMEELHEAAKSL 492          
BLAST of mRNA_Ecto-sp13_S_contig9013.20568.1 vs. uniprot
Match: B8BUH3_THAPS (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUH3_THAPS)

HSP 1 Score: 181 bits (459), Expect = 3.140e-48
Identity = 113/319 (35.42%), Postives = 164/319 (51.41%), Query Frame = 1
Query:    1 ILQTAHLFGCGWYMLATLLRTECEDLYFDGLPEGEFVFEYDVGDYIASECPWIYRNDYVALSVGRRYLGSVYWALTTLTTVGYGDLSARTPAEQIYSMAVQIVGVSWYGYIVGTWASILNSFDRKDKEQRSKMREVVAFSKAAGLPPEMAKKVRQHFRFALYRQDNWI----TFNEQELVSDMPAGLRADVITYVHANLIAQIPWLEGKDKNFVADVVVMLKPRLFMAGDVLYSRGSQPEEMFFIASGLVMLKYKQERVGFLRHGQMAGLIGLVSSEKHRITAVVAQKDAHCHGLSRANFMMLEESYPKEMEELREAAK 945
            ++   HL GC W+++              GL  G+        D +    P+ YR D V  S    Y  S+YWA +TLTTVGYGD+SARTP EQIY+M + +VGVSWY +I         SFD + K  R KM  V  F +AA LP  ++K+VR  F F L R  +       ++  EL+ ++ +GLRADV+ Y+  +LI +IP+L+ K   FVAD + M +P ++   D +   G+Q +EMFF+  G   + Y  + +  +  G   G IG +     R   V A        LSR N  +L   YP+  +EL+  A+
Sbjct:  314 VMLVTHLVGCFWFLI--------------GLSGGD--------DLLDGGWPYRYRIDLV--SKFSAYTSSMYWAFSTLTTVGYGDISARTPMEQIYAMVMMLVGVSWYAFI---------SFDSQSKAIRDKMLCVNEFIRAAKLPKVLSKQVRDFFEFKLARSQHAFLMSSNYDVDELLDELGSGLRADVLLYLDRHLIQKIPFLQDKVPQFVADTISMFQPHVYQEDDYICKEGTQADEMFFLTKGKAGIYYGTKLIVVIEEGSYFGEIGCIMGGIRR-AGVKALSTCELQALSRRNLNILLAEYPEVGDELKSVAR 598          
BLAST of mRNA_Ecto-sp13_S_contig9013.20568.1 vs. uniprot
Match: A0A2R5GKH3_9STRA (Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKH3_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.690e-44
Identity = 98/317 (30.91%), Postives = 168/317 (53.00%), Query Frame = 1
Query:    1 ILQTAHLFGCGWYMLATLLRTECEDLYFDGLPEGEFVFEYDVGDYIASECPWIYRNDYVALSVGRRYLGSVYWALTTLTTVGYGDLSARTPAEQIYSMAVQIVGVSWYGYIVGTWASILNSFDRKDKEQRSKMREVVAFSKAAGLPPEMAKKVRQHFRFALYRQDNWITFNEQ-ELVSDMPAGLRADVITYVHANLIAQIPWLEGKDKNFVADVVVMLKPRLFMAGDVLYSRGSQPEEMFFIASGLVMLKYKQER-VGFLRHGQMAGLIGLVSSEKHRITAVVAQKDAHCHGLSRANFMMLEESYPKEMEELREAAK 945
            +    HL GC WY +A            D +PE  ++ +Y + +           +D ++     +YL S+YW+ +TLTT+GYGD+ A T  E+I+S+   +VGVSWY +++ T +SI+  FDR+    + K R +V F +   +P  M +++  +F +A  R+ +    NE   ++S +   LR +V  +VH +L+ ++P+   K   F+A  V +L+P  +  GD + +RG   +EM+F+  G  ++     R    +  G   G IG + SE+HR++ VVA  + H + LS+A+   L + YP    E+R  AK
Sbjct:  494 VFLVTHLIGCFWYFVAWAGH--------DTIPEDSWIVQYGIEN-----------HDDMS-----KYLSSIYWSFSTLTTIGYGDVRAFTNREKIFSIVCMVVGVSWYAFVISTISSIMTMFDRRTAAVKRKQRLLVDFMRETHMPWAMRRRIMTYFDYATTRESSDADPNEMASVLSMLSTQLRTEVTLHVHRHLVPKVPFFLNKSPQFIASTVSLLRPLQYAKGDYISTRGQHADEMYFLIEGRAVVVLSDGRKFKSIIQGSYFGEIGCMLSERHRVS-VVAASECHVYALSKADLRSLMDEYPDVASEIRFNAK 785          
BLAST of mRNA_Ecto-sp13_S_contig9013.20568.1 vs. uniprot
Match: F0XYE9_AURAN (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYE9_AURAN)

HSP 1 Score: 168 bits (425), Expect = 6.110e-43
Identity = 104/317 (32.81%), Postives = 165/317 (52.05%), Query Frame = 1
Query:    4 LQTAHLFGCGWYMLA---TLLRTECEDLYFD---GLPEGEFVFEYDVGDYIASECPWIYRNDYVALSVGRRYLGSVYWALTTLTTVGYGDLSARTPAEQIYSMAVQIVGVSWYGYIVGTWASILNSFDRKDKEQRSKMREVVAFSKAAGLPPEMAKKVRQHFRFALYRQDNW--ITFNEQELVSDMPAGLRADVITYVHANLIAQIPWLEGKDKNFVADVVVMLKPRLFMAGDVLYSRGSQPEEMFFIASGLVMLKYKQERVGFLRHGQMAGLIGLVSSEKHRITAVVAQKDAHCHGLSRANFMMLEESYPKEMEEL 930
            L   H  GC WY++       R   ED+      GL +    F     D  +S C W+   D    +   +Y+ +VYWA +TLTTVGYGD+ A T  E+ ++M V + GVSWY YIV T +SI+ +F+ +    R +M +V  F +   LP ++++++ + +    Y  + W   +++  EL+  MP  LR DVI YV  +LIA+IP+L+ K   F+AD+VVML+P    AG+ +   G+   EMFF+  G  ++  K  +V     G   G +G +     R  ++ A   +    L +++ + L E YP   +EL
Sbjct:  321 LVITHTLGCIWYIIGKCDVASRDAREDVICVSSFGLDDDLAYFAASGADGYSSRCTWLELYDMRRGTNVEKYVAAVYWAFSTLTTVGYGDIKASTNDERRFAMIVMLTGVSWYAYIVSTTSSIMATFEWESNRIRERMLKVSGFLRENKLPDDLSRQMVRFYNH-FYSSNTWKMASYDGSELLQVMPPTLRCDVILYVERDLIAKIPFLDNKCGAFIADLVVMLQPCSVSAGEYVIREGTIANEMFFLVKGKAVVLAKGAKVHAFNAGSYFGEVGCIRGAV-RTASIKAIMRSELQTLHKSSLLSLIEEYPDTRDEL 635          
BLAST of mRNA_Ecto-sp13_S_contig9013.20568.1 vs. uniprot
Match: A0A7S0Y142_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y142_HEMAN)

HSP 1 Score: 159 bits (403), Expect = 9.260e-41
Identity = 94/310 (30.32%), Postives = 160/310 (51.61%), Query Frame = 1
Query:   13 AHLFGCGWYMLATLLRTECEDLYFDGLPEGEFVFEYDVGDYIASECPWIYRNDYVALSVGRRYLGSVYWALTTLTTVGYGDLSARTPAEQIYSMAVQIVGVSWYGYIVGTWASILNSFDRKDKEQRSKMREVVAFSKAAGLPPEMAKKVRQHFRFALYRQDNWITFNEQELVSDMPAGLRADVITYVHANLIAQIPWLEGKDKNFVADVVVMLKPRLFMAGDVLYSRGSQPEEMFFIASGLVMLKYKQERVGFLRHGQMAGLIGLVSSEKHRITAVVAQKDAHCHGLSRANFMMLEESYPKEMEELREAA 942
            AH+  C WY++ T      ED     +   E     D      SE P           V  RYL S+YWALTT+TTVGYGD++  + AE I+++   + G + + YIVG  AS+++S D + K  + KM  V  F    G+P  M ++++Q + ++ +R D    F E+ ++ ++  GLR+DV  Y+H + I ++P+ EG+D+NF++ +V+ LKP  F A   ++  G     M+FI+ G V+++ K + V  +  G   G   ++   + R T   A+       LS+ +       +P+  ++L + A
Sbjct:  265 AHISACIWYLVGTF----GEDTGLSWILNYEKCANLDDSFCNLSEEP-----------VSHRYLVSIYWALTTMTTVGYGDITPVSSAEIIFAVVEMMGGAALFAYIVGNMASLVDSLDARTKLYKEKMEAVHEFMHQRGIPSGMRQRIKQFYDYSFHRND---LFLEERILRELSTGLRSDVAMYIHQDFIEKVPFFEGRDRNFLSHLVMKLKPMQFRAMQSIFEEGDTGHVMYFISKGSVVIRVKGKIVCRMEPGSYFGEAAMLVENERRTTCAQAETPVELLMLSKTDLHDCISGFPEIAQDLVQLA 556          
BLAST of mRNA_Ecto-sp13_S_contig9013.20568.1 vs. uniprot
Match: A0A7S0VHX4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VHX4_9CRYP)

HSP 1 Score: 157 bits (398), Expect = 1.330e-39
Identity = 91/310 (29.35%), Postives = 159/310 (51.29%), Query Frame = 1
Query:   13 AHLFGCGWYMLATLLRTECEDLYFDGLPEGEFVFEYDVGDYIASECPWIYRNDYVALSVGRRYLGSVYWALTTLTTVGYGDLSARTPAEQIYSMAVQIVGVSWYGYIVGTWASILNSFDRKDKEQRSKMREVVAFSKAAGLPPEMAKKVRQHFRFALYRQDNWITFNEQELVSDMPAGLRADVITYVHANLIAQIPWLEGKDKNFVADVVVMLKPRLFMAGDVLYSRGSQPEEMFFIASGLVMLKYKQERVGFLRHGQMAGLIGLVSSEKHRITAVVAQKDAHCHGLSRANFMMLEESYPKEMEELREAA 942
            AH+  C WY++ T      ED     +         D      S+ P           V  RYL S+YWALTT+TTVGYGD++  + AE I+++   + G + + YIVG  AS+++S D + K  + KM  V  F    G+P  M ++++Q + ++ +R D    F E+ ++ ++  GLR+DV  Y+H + I ++P+ EG+D+NF++ +V+ LKP  F A   ++  G     M+F++ G V+++ K + V  +  G   G   ++   + R T   A+       LS+ +       +P+  ++L + A
Sbjct:  264 AHISACIWYLVGTF----GEDTGLSWITNYTKCASVDTKTCDLSDEP-----------VAHRYLVSIYWALTTMTTVGYGDITPVSSAEIIFAVVEMLGGATLFAYIVGNMASLVDSLDARTKLYKEKMEAVHEFMHQRGIPSGMRQRIKQFYDYSFHRND---LFLEERILRELSTGLRSDVAMYIHRDFIEKVPFFEGRDRNFLSHLVMKLKPMQFRAMQKIFEEGDTGHVMYFLSRGTVVIRVKGKIVCRMEPGSYFGEAAMLVENERRTTCAQAETPVELLMLSKTDLHDCISGFPEIAQDLVQIA 555          
BLAST of mRNA_Ecto-sp13_S_contig9013.20568.1 vs. uniprot
Match: A0A7S3XM08_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM08_HETAK)

HSP 1 Score: 147 bits (371), Expect = 1.350e-38
Identity = 78/240 (32.50%), Postives = 137/240 (57.08%), Query Frame = 1
Query:   13 AHLFGCGWYMLATLLRTECEDLYFDGLPEGEFVFEYDVGDYIASECPWIYRNDYVALSVGRRYLGSVYWALTTLTTVGYGDLSARTPAEQIYSMAVQIVGVSWYGYIVGTWASILNSFDRKDKEQRSKMREVVAFSKAAGLPPEMAKKVRQHFRFALYRQDNWITFNEQELVSDMPAGLRADVITYVHANLIAQIPWLEGKDKNFVADVVVMLKPRLFMAGDVLYSRGSQPEEMFFIASG 732
            AH+ GC W  +ATL RTE ++   DGL  GE++  +        E  W  R+D+   +  + YL ++YWA TTLTTVGYGD++A  P E  +++ + ++G S +GYI+G  AS++   D      ++K++ V+A+ +    P  +A+K+R+H+ ++  R      +NE+E++ ++P  LR +V  Y+H + I ++P+L+    + +  +V+ LKP      D++       EEM+F   G
Sbjct:   13 AHIAGCMWMGVATLYRTEPDE---DGLYPGEYLGYH--------EDSWPVRHDFWDKNKLQLYLYTLYWAFTTLTTVGYGDITALLPLEVGWTITIMMLGTSLFGYIIGNVASLMTHEDETAMLVKAKIQSVLAYMRYRDFPDTLARKIRRHYEYSWKRSQ---VYNEEEILLELPTALRTEVALYIHKDTIIKVPFLKELGDDVIPMLVLKLKPINASPRDIIIKEDYFGEEMYFCVEG 238          
BLAST of mRNA_Ecto-sp13_S_contig9013.20568.1 vs. uniprot
Match: A0A7S3UWF8_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWF8_HETAK)

HSP 1 Score: 151 bits (381), Expect = 1.960e-38
Identity = 80/246 (32.52%), Postives = 143/246 (58.13%), Query Frame = 1
Query:   13 AHLFGCGWYMLATLLRTECEDLYFDGLPEGEFVFEYDVGDYIA-SECPWIYRNDYVALSVGRRYLGSVYWALTTLTTVGYGDLSARTPAEQIYSMAVQIVGVSWYGYIVGTWASILNSFDRKDKEQRSKMREVVAFSKAAGLPPEMAKKVRQHFRFALYRQDNWITFNEQELVSDMPAGLRADVITYVHANLIAQIPWLEGKDKNFVADVVVMLKPRLFMAGDVLYSRGSQPEEMFFIASGLVMLK 747
            AH+ GC W  +ATL R          LP+ +  F    GDY+   E  W  R+D+   +  + YL ++YWA TTLTTVGYGD++A+ P E  +++ + I+G S +GYI+G  AS++   D      ++K++ V+A+ +    P  +A+K+R+H+ ++  R      +NE+E++S++P  +R +   ++H + IA++P+L    ++ V  +V  L+P L   GD++   G   +EM+F+A G + ++
Sbjct:   13 AHIAGCMWMGVATLYRA---------LPDEDGTFP---GDYLGYHEDSWPVRHDFWDKNKLQLYLYTLYWAFTTLTTVGYGDITAQLPLEVGWTILIMILGTSLFGYIIGNVASLMTHEDETAMLVKAKIQSVLAYMRYRDFPDTLARKIRRHYEYSWKRSQ---VYNEEEILSELPHTVRTECALHIHKDTIAKVPFLADLGEDVVPLLVTRLRPMLAAHGDLIIREGMFGDEMYFVAGGTLRME 243          
BLAST of mRNA_Ecto-sp13_S_contig9013.20568.1 vs. uniprot
Match: A0A2M9ZLY5_9LEPT (Cyclic nucleotide-binding protein n=1 Tax=Leptospira perolatii TaxID=2023191 RepID=A0A2M9ZLY5_9LEPT)

HSP 1 Score: 146 bits (368), Expect = 9.420e-37
Identity = 77/257 (29.96%), Postives = 148/257 (57.59%), Query Frame = 1
Query:  154 WIYRNDYVALSVG-RRYLGSVYWALTTLTTVGYGDLSARTPAEQIYSMAVQIVGVSWYGYIVGTWASILNSFDRKDKEQRSKMREVVAFSKAAGLPPEMAKKVRQHFRFALYRQDNWITFNEQELVSDMPAGLRADVITYVHANLIAQIPWLEGKDKNFVADVVVMLKPRLFMAGDVLYSRGSQPEEMFFIASGLV-MLKYKQERVGFLRH-GQMAGLIGLVSSEKHRITAVVAQKDAHCHGLSRANFMMLEESYPK 915
            W+Y +       G   Y+ ++YW +TTL TVGYGD++A    ++IY+M V I+GV  Y  ++G  A+IL++ D    EQ+ +M +V +F ++ G+P ++ +KVR  + + + R   W+  +E +L+SD+P  ++ ++  ++H  L+ ++P+L G +   V ++V  LKP +F+ GD+++ +G     ++ ++ G V +L   +E V    H GQ  G + LV+ E    T +  +     + L +A+F+   + +P+
Sbjct:  167 WLYLDQLEPTKTGFDDYIKALYWTVTTLATVGYGDITASNTTQRIYAMIVMILGVGVYATVIGNIATILSNLDMVKAEQQKRMAQVDSFLRSHGIPFDLRRKVRDFYMYRIER--GWVE-DENKLLSDLPNSVQREIKIHLHKELLERVPFLRGANPQLVTNLVFALKPVMFLPGDIIFHKGDVAHHLYILSQGSVDVLSENEESVLVSLHEGQFFGELALVTEEPRSAT-IRTRTTCETYTLFKADFLKALDQFPE 419          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9013.20568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG26_ECTSI4.230e-21594.39Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5J6P9_9PHAE2.960e-21493.06Cyclic nucleotide-binding domain-containing protei... [more]
B8BUH3_THAPS3.140e-4835.42Cyclic nucleotide-binding domain-containing protei... [more]
A0A2R5GKH3_9STRA1.690e-4430.91Potassium/sodium hyperpolarization-activated cycli... [more]
F0XYE9_AURAN6.110e-4332.81Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S0Y142_HEMAN9.260e-4130.32Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0VHX4_9CRYP1.330e-3929.35Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S3XM08_HETAK1.350e-3832.50Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3UWF8_HETAK1.960e-3832.52Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A2M9ZLY5_9LEPT9.420e-3729.96Cyclic nucleotide-binding protein n=1 Tax=Leptospi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9013contigEcto-sp13_S_contig9013:394..6099 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score618.2
Seed ortholog evalue2.1e-174
Seed eggNOG ortholog2880.D8LG26
Model size954
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.voltage-gated potassium channel activity
EggNOG OGsKOG0498@1,KOG0498@2759
Cds size954
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9013.20568.1prot_Ecto-sp13_S_contig9013.20568.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9013 394..6099 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464174.9379473-CDS-Ecto-sp13_S_contig9013:393..5571681464174.9379473-CDS-Ecto-sp13_S_contig9013:393..557Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9013 394..557 +
1681464174.9551895-CDS-Ecto-sp13_S_contig9013:1426..15441681464174.9551895-CDS-Ecto-sp13_S_contig9013:1426..1544Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9013 1427..1544 +
1681464174.967018-CDS-Ecto-sp13_S_contig9013:2851..29611681464174.967018-CDS-Ecto-sp13_S_contig9013:2851..2961Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9013 2852..2961 +
1681464174.976195-CDS-Ecto-sp13_S_contig9013:3361..34421681464174.976195-CDS-Ecto-sp13_S_contig9013:3361..3442Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9013 3362..3442 +
1681464174.986245-CDS-Ecto-sp13_S_contig9013:4070..42661681464174.986245-CDS-Ecto-sp13_S_contig9013:4070..4266Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9013 4071..4266 +
1681464174.9965956-CDS-Ecto-sp13_S_contig9013:5091..51571681464174.9965956-CDS-Ecto-sp13_S_contig9013:5091..5157Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9013 5092..5157 +
1681464175.007515-CDS-Ecto-sp13_S_contig9013:5632..57251681464175.007515-CDS-Ecto-sp13_S_contig9013:5632..5725Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9013 5633..5725 +
1681464175.0181606-CDS-Ecto-sp13_S_contig9013:5973..60991681464175.0181606-CDS-Ecto-sp13_S_contig9013:5973..6099Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9013 5974..6099 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9013.20568.1

>prot_Ecto-sp13_S_contig9013.20568.1 ID=prot_Ecto-sp13_S_contig9013.20568.1|Name=mRNA_Ecto-sp13_S_contig9013.20568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=318bp
ILQTAHLFGCGWYMLATLLRTECEDLYFDGLPEGEFVFEYDVGDYIASEC
PWIYRNDYVALSVGRRYLGSVYWALTTLTTVGYGDLSARTPAEQIYSMAV
QIVGVSWYGYIVGTWASILNSFDRKDKEQRSKMREVVAFSKAAGLPPEMA
KKVRQHFRFALYRQDNWITFNEQELVSDMPAGLRADVITYVHANLIAQIP
WLEGKDKNFVADVVVMLKPRLFMAGDVLYSRGSQPEEMFFIASGLVMLKY
KQERVGFLRHGQMAGLIGLVSSEKHRITAVVAQKDAHCHGLSRANFMMLE
ESYPKEMEELREAAKSL*
back to top

mRNA from alignment at Ecto-sp13_S_contig9013:394..6099+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9013.20568.1 ID=mRNA_Ecto-sp13_S_contig9013.20568.1|Name=mRNA_Ecto-sp13_S_contig9013.20568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5706bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9013:394..6099+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATACTTCAGACGGCCCACCTGTTCGGGTGCGGGTGGTACATGCTGGCGAC GTTGCTGAGAACGGAGTGCGAGGACCTGTACTTCGACGGACTTCCGGAAG GGGAGTTTGTCTTCGAGTACGATGTCGGTGACTACATCGCCAGCGAGTGC CCGTGGATCTACAGGTGTGCTGTGTGTGTTTGTTTTCTTTATTGGCATCG ACCGGGCCAACCGGCGTGACAATGAACAAACGCCAGTCGCATCACGGGAC AGAAAACGCGAATACGCTCAATGTGTGTTAATGTGCACGCGTGCAATTTC ATGCTTTTGGTACGAAAACAAGCAAATCCAACCTGCATCGATGGACAAAA AGTCCATGATAAGTGAGCGATGGATTCCGCGTGTACATCACCTGTATGCC TGTTTTTTTGGGTGCAGTTGTTTGTGTATTTGTGCGTGTAGTGTTCGTAA GCATCGAACTCGTTCACCGGATTACCAAGAACAAGGATCTCGCAAATAGG CAGCCAATCCAACCTTCACGAAATGATACGGTGGTTTCCCTATACGTAGA CGCCTTTTTGTGGGAAAGGAAAGGGTAACGCACCAGATGGATGAGTTTTT CAATGACGTTGCCGTTGACTTTCCGTGCGAAGAACAATAGGGTCGAGTTG TGTAGCGCGCGATGACCGTTGCAGACGAGAAGGGCTGAAAATTGCTTGCA GTCTAAAAACAGATGGACCAGACGTAGAAAGGCTCGTACAGTGGTGTATT GAAAAACACTACGGCCACTGTCAGCACCGTTGAGAGCTTGTCCAATTAGG AACAGCAGAGAGGTGTGCGTGAGCCCACGCTGGCACAGATCTAAGGCCGT TCTCACCTGCGCCGATTGTGCGTTCGTTGTTTTGCTGTGTTTCCGCTTGG CCACGAAAAACTGGCCTCCTCCTTCCGAAAGACACAGCAGACGTACAGCG GTAGACCGTAGACGCGACGGCACGAAAACGATACAAAACACAACAACTTA AATCGCCATTTTCTTCCGTCTCTACTACGCCAGGAACGACTACGTAGCGC TCTCGGTGGGAAGGAGGTATCTCGGAAGCGTGTACTGGGCCCTGACTACC CTTACCACCGTCGGTTACGGGGATCTCTCTGCTAGGACCCCGGCTGAGCA GGTGCAGCAGTCGTTCCCTATTTGAATGACGCGCATGCTTTTTTTTTTTC TTTTCTATAGTCTTATTCTCGGGGAAGCGTCTTTTAGTTATTACCCTCCC TCCTTCTTGCAAACCAAAGAAACCAAGTAATTAAGTGGGACTAGATGTTC AGTGAAGTATCGTTTGAAGGAATCAAGGAGTACCTACATGGACCAATGGA TGCAGGGACAAGACTGAAGGTTGACTTAGGACCGGGTACATTGGCCTACG ATAACGTAGACGAAGATTGCGGAAGGTATGTAGACGATGAATACGACAAG TTTACGTGTAATCGCTGCTCCGAGTGCGAAGACCGGGTTCATGCGGTTGC GGAATGTCTGTTGTACAAGAAGGAGAGGGAAGTGTACATGACTGAGCTGG AAAAAGTAGAAGGAAGATACGCGGAGCTATTTGAGGCATGGAGTACCCAG GAGAAGACGGTAGCTGTATTGGGACATGGGAAGTGGGTTGAACAGGCTGG AAGTGATATCCATAGGACATATAGGCTCGATGGAAAAGCTATTTTGAGCC ACCTTTGGCAAGGTAGGAAGGAACGATTTGCCATCGGTGATCGGTCCAGT GGGAACAAGGCTCCATCCTCTCGAGGAACACGTGGTCAATGGTCTAACCC CTGAGGCATGCGAAACATGAGAGTACGCCCCCCCCCCCCCCTCCCTCGTT ATGCATCTTTGAAATATTGGGGGGCACCATGGTTCTAAAAATATCTCGTC TTTCGCGTTAGGAGTTGCCTTTTATCCCGAGTGTCTACAGCGGGGAAGAC CTAGACATCTAGGTACTTGCCTCTGCACCACGGACGGTTTCACGCCTTGT TGAGCGGACACGTACACTCTGTGGTCCTGCGAGAACCGATACGTCATGTC GTGCAGTGTTAGGCGAGCATGGTGTCTTTGGCCATCGACGAAGACGGTCG CAAATTTTCTTCCGGCTACCAGCGCACAGCTGGATTGGAACACGCCTTTC TGATCGCCTCCGATCAGGCGGGCAGGCCACGGGGCGTTCGCCTAGTCAAG TTCCTGTGCAGCGGGGGTACTTGGCGTGTTGATTTTCCCTAACAACCTGA CCAATGACTGATGGACCGTGCATGTTACAGGACTCGAAGAACAGACACAC TTCTCGAACTCTATGTCTAAGGCAGTAATTATTGCCTCTTCGAAGGTGTG GTGATTGAAGCGGGAACTTGGTAGGTAGCTCCTTCTGCCTCTCTCCGTTC AGCTATATCTCACGCAGAACCATGCTGTTTTGTTCGGGGGCCGGCACCCT ACGCGCAGATCTACTCCATGGCGGTCCAGATCGTGGGCGTTTCGTGGTAC GGGTACATCGTCGGGACTTGGGCTTCCATCCTCAACAGCTTCGACCGCAA GGACAAGGAACAGAGGAGGTGTGTAAGAAGTGTGTGCGTGTGGTGAAAAG CGTCTTATGCTTGAGTGTTTTGTTGCTTCTGGCGGTGGTGTTGTCGCAGT TTTTTTTTGGTGTTGGTTTTTGTTGCATGTCGGAAGAGTCTTTTGTTGTC ATTGCTGTCATAGTCGTGTTAACCTCGGTACTGTTGTGTTGACCACTGCC ATCGTCTCGGTCCTAGTTGTCGGCTGAAACACCCAGAACCGTGTCGTCCA TGTCACGGTTACGTCCTCACTCCCATGCTTGCCGCGGGGTGCTGTACGCC TACCCAACACCAGACGCCCCCTTACCTCTTCGCTTCAACCGACGTGACCT CACGTTGATGCTGTATTCGTTGTCCCCACGTTGCTGTTGGGCTTGTTGCT GCTTCCGTGCTCGAGCAGCAAAATGCGTGAGGTGGTGGCGTTCTCCAAGG CTGCCGGCCTGCCCCCGGAAATGGCGAAGAAGGTTCGACAGCACTTCCGG TGAGGCTTTCGAAATCATGCGGAAACATTTTGGCCTGGGATGACGAAAAA TGTTGCTTGGGTGTCCTTCATCGATTGCTGTAATTTTTCGGAATCACACG CATGCGGTCTGCCTGTCGTATCTACGTTTTTTGGGAGATACATTTTCGGC TCTATTCATCTGCTTGAGTTGAAAGAGGTGCCGAAGCATAGCCAGGAAGG TCCGGCGGCATTTGGGAAGCAGCTCCTTGAAGACTGTCAGTGGAATTTTC TTGTGGAGGCCGGAGCAAGGGTTACGGGCATCAGCACGCTATTGACCCCC CGGCTTCGTAGCCGCTCTCCTTATCCTCTTGCGTCCGGTGGTTTTTTGCA CAGTGACCTACTTCCAACGGCCGTCGACTCAACACTTGGCCTAGTTGACA CGTACCTTCCAAATGTCTTCTTAAGATCGAGCGTAGCAAGCATGATCAAA CAAGCGTCTCCAGACTCTCTTCACGAGCACAGCTGGGTTGTTCTTACCCC CCATGTAGGGCCACTGTTTGTCCTGCGAGAGACCGACCGCCTTCATAAAA ATTGTTGCCCGCCCCCCCCCCCCCCCCCCCCCGCCGAACGTGTTGGAAAA AATTCGCCCCGGAAAACATAAAAAAAGGTTTGCCCTGTATAGGCAGGACA ACTGGATCACCTTCAACGAGCAAGAGCTGGTGTCTGACATGCCGGCGGGC CTCAGGGCGGACGTCATCACGTACGTCCACGCGAACTTGATCGCCCAGAT CCCGTGGCTGGAGGGCAAGGACAAGAACTTCGTGGCGGACGTCGTGGTCA TGCTAAAACCTCGCCTCTTCATGGTGCGAGACGGGAGAATAAGGGGTTGC TGATTTTTACCTTTTTTCTATGTTAACCCTGAAGGTGCCCCATTCAAGTG AACGGGGGGCTAGTACCGGGTTCTCTTTTTAATTTTGTTTGTCCCTTTGT TCGTGTGAATATATGAAGCCGTTTTATATTTTCAACTGCACAACAGCTGA AAGGGTCTTGGGTATTCATGACTCTTCACGAGCAGTCTATTTGAAGGATC TTTTTGTCGTAACTCCCGAACGTTACCAAAGTTTACGGCGAAGTTCCAAT TATATTCCAAAGTAGCTGGTGTGTCGAAGACAGGCGTAGAAACGACGCAT CCACAAGTGCACACACAGGAGTAGCATCGCGAGATACGATCTGAGGGCAG TGTCTTGCTGATCGTTGGGCAGCAAGAAACAGTAACTCTTCCCAAGCCAC CTGCGGAGATGGAGAGTGGGAAGTCTTGTGACTATACCCTGCCGTCTCTG TTCGGTGGCGTTCTTTCTCTTCCGAAACCTTTCTCCTTGCCCAAATCGCA TGAACGAAATTTCCAGCCCCCGTGAGGTGGGTAACACTACAACCTCGACC TTGGTCTCTGTCTAACGAGGGTAGCCTTTGTCCTTAATGGCGTCGACGAT TAGATCTAGTAGAAATGATTGTATCCCTCCCGAGTAAAATTCGTACTGAC AGAGGGTTCGAATTTCGGTGGGCCCACTTGTCTTGGTTTGCTTTGGCTCC GGTGTGCTGGTATTTCGATTGTACGGGCGTCGGGCCCAAGACGAGTTTGT CGCTTTTGAAAAGCGTCACCACTGTGTATGCTACCCGATATTTTGCAGGC GGGAGACGTGCTGTACAGCAGGGGGTCCCAGCCGGAGGAAATGTTCTTCA TCGCCAGTGGACTCGTGAGTAGCGGTTGCTGTGGTGACGTGTAAAATTGG TTGTTGTTGTTGCTGCTGCTGCACTCGGAGGAAACATCCTTCATTGCCGG TGGACTCGTGAGTAATGGTTGCTGTTGGAGACGGGTTGTTGTTGTCGTTG TTGCTGCTGCTGCTGCTGCCGCTGCTGTCGGTGTTTCCTCTACCCGTCAT GCTGCCGCTCCTGCTTTCCTCCTCGAAGCGATGTCCCTGAAGCCCCCCTC TCTTCGCCCCGTTCTCTTCGTTGACATACCTTCTTTTTTCTCACCCCCGC CATCCTACATGTGCCCGTGGCTTCCTCCTATGCGCCGATTCCCGCGCACA CAACCACCGACCGCGTGGCTTCCTCCTATGCGCCGATTCCCGCGCACACA ACCACCGACCGCGTGGCTTCCTCCTATGCGCCGATTACCGCGCAAACAAC CACCGACCGCCCGTCCTGACGGACTGCTTTGCCCCCCAGGTGATGCTCAA GTACAAGCAGGAGCGCGTGGGATTCCTGAGGCACGGCCAGATGGCGGGCT TGATCGGGCTTGTCAGCTCCGAGAAGCACAGGGTATGGTGGTGTTCACAT GGTGGTGGTGTTGTTGCTGCAGCTGCTGTCGCTTTTGGTCGTCGCGTGTG TTGCTTTCGCTCCTCTAGAAATTATGCATACAATCAAACAGAGACTACCG TTTCGAGAAAATGCCACAGTCGATGCTGTTGTTTGTAGTCGAGCCCCCCC CCCTCCCCCCCAAACCGCCGTCGAGCTCGTTTTTGTGGGGATGTCATCGA CCGCCTTGTGTCGGGCGTTGGGCGGCGCAGATTACGGCCGTGGTTGCCCA GAAGGACGCGCATTGCCATGGGCTGTCTCGAGCGAACTTCATGATGCTGG AGGAAAGCTACCCCAAGGAGATGGAAGAACTCCGCGAGGCTGCCAAGAGC CTGTAA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9013:394..6099+

>mRNA_Ecto-sp13_S_contig9013.20568.1 ID=mRNA_Ecto-sp13_S_contig9013.20568.1|Name=mRNA_Ecto-sp13_S_contig9013.20568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=954bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9013:394..6099+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATACTTCAGACGGCCCACCTGTTCGGGTGCGGGTGGTACATGCTGGCGAC
GTTGCTGAGAACGGAGTGCGAGGACCTGTACTTCGACGGACTTCCGGAAG
GGGAGTTTGTCTTCGAGTACGATGTCGGTGACTACATCGCCAGCGAGTGC
CCGTGGATCTACAGGAACGACTACGTAGCGCTCTCGGTGGGAAGGAGGTA
TCTCGGAAGCGTGTACTGGGCCCTGACTACCCTTACCACCGTCGGTTACG
GGGATCTCTCTGCTAGGACCCCGGCTGAGCAGATCTACTCCATGGCGGTC
CAGATCGTGGGCGTTTCGTGGTACGGGTACATCGTCGGGACTTGGGCTTC
CATCCTCAACAGCTTCGACCGCAAGGACAAGGAACAGAGGAGCAAAATGC
GTGAGGTGGTGGCGTTCTCCAAGGCTGCCGGCCTGCCCCCGGAAATGGCG
AAGAAGGTTCGACAGCACTTCCGGTTTGCCCTGTATAGGCAGGACAACTG
GATCACCTTCAACGAGCAAGAGCTGGTGTCTGACATGCCGGCGGGCCTCA
GGGCGGACGTCATCACGTACGTCCACGCGAACTTGATCGCCCAGATCCCG
TGGCTGGAGGGCAAGGACAAGAACTTCGTGGCGGACGTCGTGGTCATGCT
AAAACCTCGCCTCTTCATGGCGGGAGACGTGCTGTACAGCAGGGGGTCCC
AGCCGGAGGAAATGTTCTTCATCGCCAGTGGACTCGTGATGCTCAAGTAC
AAGCAGGAGCGCGTGGGATTCCTGAGGCACGGCCAGATGGCGGGCTTGAT
CGGGCTTGTCAGCTCCGAGAAGCACAGGATTACGGCCGTGGTTGCCCAGA
AGGACGCGCATTGCCATGGGCTGTCTCGAGCGAACTTCATGATGCTGGAG
GAAAGCTACCCCAAGGAGATGGAAGAACTCCGCGAGGCTGCCAAGAGCCT
GTAA
back to top