mRNA_Ecto-sp13_S_contig90.20552.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig90.20552.1
Unique NamemRNA_Ecto-sp13_S_contig90.20552.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig90.20552.1 vs. uniprot
Match: D8LLE6_ECTSI (Nicotinate phosphoribosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLE6_ECTSI)

HSP 1 Score: 1064 bits (2752), Expect = 0.000e+0
Identity = 533/541 (98.52%), Postives = 536/541 (99.08%), Query Frame = 1
Query:   67 MPSSREDVKGLVPLNILVSALMTDMYQITMSYAYWKAGRHNENAVFDLFFRKCPFKGQFAIFAGLSEVIALMNSFTFTPSDIAYLRTVLPHCEEAFFDWLGQLDCRNVRLYALEEGSLCFPRIPLIRVEGPLAVAQLLETPLLNLINYPSLIATNAARLRLAAGADKTLLEFGLRRAQGPDGALSASRYSYIGGFNGTSNVLAGKLIGVDIRGTHAHAFVQSYTSFEQIKDPTLDGKDFVAIVKGYRDRPVCEKASGSSNDGELAAFTAYAQAFPDGFVALVDTYDTLQSGVPNFLCVALALDDLGHRALGCRLDSGDLSYLSQEVRKMTTEAAKTFNRPFLATTNIVASNDINEESLHYLADQGHAIDTFGIGTNLVTCQAQPALGCVYKLVSIEGVPRIKLSQTTSKITIPGRKAVYRLLGADRVPILDIMLKDGEEPPQPGVPILARHPFVATMRARVTPTQVVRLQEMVWDGQAGGATSDMPTIHEVRAKVTKGLKEIRQDTLQRLNPTPYKVSVSEGLHDFLHSLWEKEAPIRELS 1689
            MP+SREDVKGLVPLNILVSAL+TDMYQITMSYAYWKAGRHNENAVFDLFFRKCPFKGQFAIFAGLSEVIALMNSFTF+PSDIAYLRTVLPHCEEAFFDWLGQLDCRNVRLYALEEGSLCFPRIPLIRVEGPLAVAQLLETPLLNLINYPSLIATNAARLRLAAGADKTLLEFGLRRAQGPDGALSASRYSYIGGFNGTSNVLAGKLIGVDIRGTHAHAFVQSYTSFEQIKDPTLDGKDFVAIVKGYRDRPVC K SGSSNDGELAAFTAYAQAFPDGFVALVDTYDTLQSGVPNFLCVALALDDLGHRALGCRLDSGDLSYLSQEVRKMTTEAAKTFNRPFLATTNIVASNDINEESLHYLADQGHAIDTFGIGTNLVTCQAQPALGCVYKLVSIEGVPRIKLSQTTSKITIPGRKAVYRLLGADRVPILDIMLKDGEEPPQPGVPILARHPFVAT RARVTPTQVVRLQEMVWDGQAGGATSDMPTIHEVRA V KGLKEIRQDTLQRLNPTPYKVSVSEGLHDFLHSLWEKEAPIRELS
Sbjct:    1 MPTSREDVKGLVPLNILVSALLTDMYQITMSYAYWKAGRHNENAVFDLFFRKCPFKGQFAIFAGLSEVIALMNSFTFSPSDIAYLRTVLPHCEEAFFDWLGQLDCRNVRLYALEEGSLCFPRIPLIRVEGPLAVAQLLETPLLNLINYPSLIATNAARLRLAAGADKTLLEFGLRRAQGPDGALSASRYSYIGGFNGTSNVLAGKLIGVDIRGTHAHAFVQSYTSFEQIKDPTLDGKDFVAIVKGYRDRPVCGKGSGSSNDGELAAFTAYAQAFPDGFVALVDTYDTLQSGVPNFLCVALALDDLGHRALGCRLDSGDLSYLSQEVRKMTTEAAKTFNRPFLATTNIVASNDINEESLHYLADQGHAIDTFGIGTNLVTCQAQPALGCVYKLVSIEGVPRIKLSQTTSKITIPGRKAVYRLLGADRVPILDIMLKDGEEPPQPGVPILARHPFVATKRARVTPTQVVRLQEMVWDGQAGGATSDMPTIHEVRATVAKGLKEIRQDTLQRLNPTPYKVSVSEGLHDFLHSLWEKEAPIRELS 541          
BLAST of mRNA_Ecto-sp13_S_contig90.20552.1 vs. uniprot
Match: A0A836CCF5_9STRA (Nicotinate phosphoribosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCF5_9STRA)

HSP 1 Score: 681 bits (1756), Expect = 1.440e-236
Identity = 342/543 (62.98%), Postives = 419/543 (77.16%), Query Frame = 1
Query:   67 MPSSREDVKGLVPLNILVSALMTDMYQITMSYAYWKAGRHNENAVFDLFFRKCPFKGQFAIFAGLSEVIALMNSFTFTPSDIAYLRTVLPHCEEAFFDWLGQLDCRNVRLYALEEGSLCFPRIPLIRVEGPLAVAQLLETPLLNLINYPSLIATNAARLRLAAGADKTLLEFGLRRAQGPDGALSASRYSYIGGFNGTSNVLAGKLIGVDIRGTHAHAFVQSYTSFEQIKDPTLDGKDFVAIVKGYRDRPVCEKASGSSNDGELAAFTAYAQAFPDGFVALVDTYDTLQSGVPNFLCVALALDDLGHRALGCRLDSGDLSYLSQEVRKMTTEAAKTFNRPFLATTNIVASNDINEES--LHYLADQGHAIDTFGIGTNLVTCQAQPALGCVYKLVSIEGVPRIKLSQTTSKITIPGRKAVYRLLGADRVPILDIMLKDGEEPPQPGVPILARHPFVATMRARVTPTQVVRLQEMVWDGQAGGATSDMPTIHEVRAKVTKGLKEIRQDTLQRLNPTPYKVSVSEGLHDFLHSLWEKEAPIRELS 1689
            MP+       L  +N L + LMTDMYQ+TM+YAYW+AGR  E AVFDLFFRK PF+G+F +F GL E IAL++SF+F+ +DI YLR V+   ++ FFDWL + DC  V++YA+ EG++ FPRIPL+R+EGPLAVAQLLETPLLNL+N+PSL+ATNAAR RLAAGADK LLEFGLRRAQGPDG LSASRY+Y+GGF+ TSNV AGK +G+ + GTHAHAFVQ+Y+S EQI+   +DGKD VA+ + YR R   E    +SN GELAAF AYA AFP GF+ALVDTYDTLQSG+PNF+ VA ALDD GHRA+G RLDSGDL+YLS+EVR M   AA    RP+LA   IVASNDINE++  LH L +QGH +DTFGIGT+LVTCQAQPALGCVYKLV I G PR+KLS+  +K+T+PGRK  YRL GAD   +LD+M    + PP+ G P+L +HPF AT+RA VT ++V+ L ++VWDG  GG    +PTIHEVRA V KG+  +R+D  + LNPTPYKVS+S  L  FLH LWE EAPI+ LS
Sbjct:    1 MPAVFIRADALKCINPLCTPLMTDMYQLTMAYAYWQAGRAEEPAVFDLFFRKNPFEGEFTVFGGLGECIALISSFSFSDTDIEYLRGVMTGIDQGFFDWLIKADCSKVKVYAIREGTIVFPRIPLLRIEGPLAVAQLLETPLLNLVNFPSLMATNAARFRLAAGADKKLLEFGLRRAQGPDGGLSASRYAYMGGFDATSNVTAGKFLGLPVSGTHAHAFVQAYSSCEQIRQRCVDGKDVVALAELYRRRLGYE----TSNIGELAAFCAYAIAFPAGFLALVDTYDTLQSGIPNFIAVAFALDDAGHRAVGVRLDSGDLAYLSKEVRHMFEVAAVAEARPWLAKVTIVASNDINEKASVLHALDEQGHCVDTFGIGTHLVTCQAQPALGCVYKLVEISGSPRMKLSENKNKVTVPGRKCAYRLFGADGTQLLDLMQHADDPPPRAGEPVLCKHPFEATVRAMVTASRVMPLHQLVWDGAGGGVVEPLPTIHEVRAHVMKGMASLREDVKRSLNPTPYKVSLSVRLFAFLHELWEHEAPIKALS 539          
BLAST of mRNA_Ecto-sp13_S_contig90.20552.1 vs. uniprot
Match: K3WM81_GLOUD (Nicotinate phosphoribosyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WM81_GLOUD)

HSP 1 Score: 652 bits (1682), Expect = 1.960e-225
Identity = 325/530 (61.32%), Postives = 406/530 (76.60%), Query Frame = 1
Query:  103 PLNILVSALMTDMYQITMSYAYWKAGRHNENAVFDLFFRKCPFKGQFAIFAGLSEVIALMNSFTFTPSDIAYLRTVLPHCEEAFFDWLGQLDCRNVRLYALEEGSLCFPRIPLIRVEGPLAVAQLLETPLLNLINYPSLIATNAARLRLAAGADKTLLEFGLRRAQGPDGALSASRYSYIGGFNGTSNVLAGKLIGVDIRGTHAHAFVQSYTSFEQIKDPTLDGKDFVAIVKGYRDRPVCEKASGSSNDGELAAFTAYAQAFPDGFVALVDTYDTLQSGVPNFLCVALALDDLGHRALGCRLDSGDLSYLSQEVRKMTTEAAKTFNRPFLATTNIVASNDINEESLHYLADQ--GHAIDTFGIGTNLVTCQAQPALGCVYKLVSIEGVPRIKLSQTTSKITIPGRKAVYRLLGADRVPILDIMLKDGEEPPQPGVPILARHPFVATMRARVTPTQVVRLQEMVWDGQAGGATSDMPTIHEVRAKVTKGLKEIRQDTLQRLNPTPYKVSVSEGLHDFLHSLWEKEAPIREL 1686
            P N LVS L+TD+YQ+TM YAYWK GRHN++AVFDLFFRK PFKG++ +FAGL E + L+N+F FT SDIAYLR  LP+ E AFF+WL  LDC  +++YA++EG++ FPRIPL+R+EG LAV QLLETPLLNL+NY SLI TNA R + AAGADK+LLEFGLRRAQGPDG LSASRYSY+ GF GTSNVLAGKL G+ I+GTHAHAFVQ++TS + +K   LDG +F+ IV  YR     E     +NDGELAAF AYA AFP  F+ALVDTY+TL SGVPNFLCVALAL++LG++ +G RLDSGDLSYLS++ R +    A+ ++  +    +I ASNDINE  L+ L +Q  GH ID +GIGT+LVTCQAQPALG VYKLV I G PRIKLSQ  SK+TIPGRK  YRL+G++  P+LD+M+   E+PP  G  +L R+PF    RA VTP+ V+ L E++WDG+ GG  + +PT+ E RA VT+  + IR+D ++ LNPTPYKVSVS  L+DF+H LW KE P++EL
Sbjct:    9 PTNSLVSPLLTDLYQLTMVYAYWKVGRHNDHAVFDLFFRKNPFKGEYTVFAGLEEALGLINTFKFTESDIAYLRVALPNAENAFFEWLATLDCSQIKVYAIKEGTIVFPRIPLLRIEGNLAVGQLLETPLLNLLNYASLITTNATRFKRAAGADKSLLEFGLRRAQGPDGGLSASRYSYMAGFAGTSNVLAGKLHGIPIKGTHAHAFVQAHTSLDDVKVSALDGHNFLEIVLKYRQ----EMEFTRTNDGELAAFIAYAIAFPRTFLALVDTYETLTSGVPNFLCVALALNELGYKPVGIRLDSGDLSYLSRQARALFKSTAERYDLEYFKKLSITASNDINEAVLNSLNEQVRGHEIDAYGIGTHLVTCQAQPALGMVYKLVEIHGEPRIKLSQDASKVTIPGRKEAYRLVGSNGSPLLDLMIGCDEKPPVVGKKMLCRNPFDELRRAYVTPSNVIPLHELMWDGENGGIVAPLPTLEERRAYVTEQFELIREDVVRSLNPTPYKVSVSSDLYDFIHELWMKEFPVQEL 534          
BLAST of mRNA_Ecto-sp13_S_contig90.20552.1 vs. uniprot
Match: A0A3R7HCJ9_9STRA (Nicotinate phosphoribosyltransferase (Fragment) n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HCJ9_9STRA)

HSP 1 Score: 652 bits (1681), Expect = 1.420e-224
Identity = 321/540 (59.44%), Postives = 405/540 (75.00%), Query Frame = 1
Query:   67 MPSSREDVKGLVPLNILVSALMTDMYQITMSYAYWKAGRHNENAVFDLFFRKCPFKGQFAIFAGLSEVIALMNSFTFTPSDIAYLRTVLPHCEEAFFDWLGQLDCRNVRLYALEEGSLCFPRIPLIRVEGPLAVAQLLETPLLNLINYPSLIATNAARLRLAAGADKTLLEFGLRRAQGPDGALSASRYSYIGGFNGTSNVLAGKLIGVDIRGTHAHAFVQSYTSFEQIKDPTLDGKDFVAIVKGYRDRPVCEKASGSSNDGELAAFTAYAQAFPDGFVALVDTYDTLQSGVPNFLCVALALDDLGHRALGCRLDSGDLSYLSQEVRKMTTEAAKTFNRPFLATTNIVASNDINEESLHYLADQGHAIDTFGIGTNLVTCQAQPALGCVYKLVSIEGVPRIKLSQTTSKITIPGRKAVYRLLGADRVPILDIMLKDGEEPPQPGVPILARHPFVATMRARVTPTQVVRLQEMVWDGQAGGATSDMPTIHEVRAKVTKGLKEIRQDTLQRLNPTPYKVSVSEGLHDFLHSLWEKEAPIREL 1686
            +P+   +   L P N LV  ++TD+YQITM YAYWK GRHN++AVFDLFFRK PF G++ +FAGL E +A++N+F FT SDIAYLR VLPH E+ FF+WL ++DC ++++YA++EGS+ FPRIPL+R+EG L V QLLETPLLNL+N+ SL+ TNA R + AAGADK LLEFGLRRAQGPDG LSASRYSY+ GF GTSNVLAGKL  + I GTHAHAFVQ++TS + +K  T+DGK+F+ IV  YR+    E     +NDGELAAF AYA AFPD F+ALVDTYDTL SGVPNF+CVALAL +LGHR  G RLDSGDLSYLS+  R     A++ +   +    NI ASNDINE  L+ L +Q H I+++GIGT+LVTCQAQPALG VYKLV I G PRIKLSQ  SK+TIPGRK  +RL+GA+  P+LD+M    E+ PQ G  +L R+PF    RA VTP++++ L  + WDG  GG   ++PT+ E R  VT+  + IR+D ++ LNPTPYKVSVS  L++F+H LW KE P++EL
Sbjct:   45 VPTKMMNGNVLEPTNSLVGPMLTDLYQITMVYAYWKVGRHNDHAVFDLFFRKNPFHGEYTVFAGLEEALAMVNTFKFTASDIAYLREVLPHAEDGFFEWLARIDCSDIKVYAIKEGSIVFPRIPLVRIEGSLGVGQLLETPLLNLLNFASLVTTNATRFKKAAGADKKLLEFGLRRAQGPDGGLSASRYSYMAGFAGTSNVLAGKLHKIPIMGTHAHAFVQAHTSLDDVKVTTIDGKNFLEIVLKYRN----ELGHTQTNDGELAAFIAYAVAFPDAFLALVDTYDTLSSGVPNFICVALALHELGHRPAGIRLDSGDLSYLSKRCRSAFITASECYGIDYFKELNITASNDINEPVLNSLNEQRHEINSYGIGTHLVTCQAQPALGMVYKLVEINGEPRIKLSQDVSKVTIPGRKEAFRLIGANGKPLLDLMTGCSEKEPQVGEKMLCRNPFDELRRAYVTPSKIIPLHSLFWDGANGGLVGELPTLEERRQYVTEQFELIREDVVRSLNPTPYKVSVSNELYEFIHDLWMKEYPVKEL 580          
BLAST of mRNA_Ecto-sp13_S_contig90.20552.1 vs. uniprot
Match: A0A8K1CGD6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGD6_PYTOL)

HSP 1 Score: 645 bits (1663), Expect = 1.360e-222
Identity = 322/528 (60.98%), Postives = 400/528 (75.76%), Query Frame = 1
Query:  103 PLNILVSALMTDMYQITMSYAYWKAGRHNENAVFDLFFRKCPFKGQFAIFAGLSEVIALMNSFTFTPSDIAYLRTVLPHCEEAFFDWLGQLDCRNVRLYALEEGSLCFPRIPLIRVEGPLAVAQLLETPLLNLINYPSLIATNAARLRLAAGADKTLLEFGLRRAQGPDGALSASRYSYIGGFNGTSNVLAGKLIGVDIRGTHAHAFVQSYTSFEQIKDPTLDGKDFVAIVKGYRDRPVCEKASGSSNDGELAAFTAYAQAFPDGFVALVDTYDTLQSGVPNFLCVALALDDLGHRALGCRLDSGDLSYLSQEVRKMTTEAAKTFNRPFLATTNIVASNDINEESLHYLADQGHAIDTFGIGTNLVTCQAQPALGCVYKLVSIEGVPRIKLSQTTSKITIPGRKAVYRLLGADRVPILDIMLKDGEEPPQPGVPILARHPFVATMRARVTPTQVVRLQEMVWDGQAGGATSDMPTIHEVRAKVTKGLKEIRQDTLQRLNPTPYKVSVSEGLHDFLHSLWEKEAPIREL 1686
            P N LV+ L+TD+YQITM YAYWK GRHN++AVFDL+FRK PFKG++ +FAGL E +AL+NSF FT SDIAYLRTVL   EEAFF+WL  +DC N+++YA++EG++ FPR+PL+R+EG LAV QLLETPLLNL+NY SLI TNA R + AAG  K+LLEFGLRRAQGPDG LSASRYSY+ GF+GTSNVLAGKL  + I+GTHAHAFVQ++T+ + +K  TLDG + + IV  YR     E  +  +NDGELAAF +YA AFP GF+ALVDTYDTL SGVPNFL VALAL +LG++ +G RLDSGDL+YLS++ R     AA+ +        +I ASNDINE  L+ L +QGH ID +GIGT+LVTCQAQPALG VYKLV I G PRIKLSQ  SK+TIPGRK  YRL+G +  PILD+M+   E+PPQ G  +L R+PF    RA VTP+ ++ L E+VWDG  GG    +P++ E R+ V +    IR+D ++ LNPTPYKVSVS  L+DF+H LW KE P+ EL
Sbjct:    9 PTNSLVTPLLTDLYQITMVYAYWKVGRHNDHAVFDLYFRKNPFKGEYTVFAGLGEALALLNSFRFTESDIAYLRTVLTDAEEAFFEWLATVDCSNIKVYAIKEGTIVFPRVPLLRIEGNLAVGQLLETPLLNLLNYASLITTNATRFKRAAGPGKSLLEFGLRRAQGPDGGLSASRYSYMAGFDGTSNVLAGKLHNIPIKGTHAHAFVQAHTTLDDVKISTLDGHNLLEIVLKYRR----ELDALQTNDGELAAFISYAIAFPKGFLALVDTYDTLTSGVPNFLSVALALHELGYKPVGIRLDSGDLAYLSKQARVQFVAAAERYGIEEFKRLSITASNDINEAVLNSLNEQGHEIDAYGIGTHLVTCQAQPALGMVYKLVEINGEPRIKLSQDPSKVTIPGRKNAYRLVGENGRPILDLMVGCDEQPPQVGKKLLCRNPFDELRRAFVTPSSIIALHELVWDGANGGIVGHLPSLEEARSHVAEQFDLIREDVVRALNPTPYKVSVSSELYDFIHDLWMKEFPVHEL 532          
BLAST of mRNA_Ecto-sp13_S_contig90.20552.1 vs. uniprot
Match: A0A484DZT0_BRELC (Nicotinate phosphoribosyltransferase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZT0_BRELC)

HSP 1 Score: 642 bits (1656), Expect = 1.550e-221
Identity = 320/531 (60.26%), Postives = 395/531 (74.39%), Query Frame = 1
Query:   94 GLVPLNILVSALMTDMYQITMSYAYWKAGRHNENAVFDLFFRKCPFKGQFAIFAGLSEVIALMNSFTFTPSDIAYLRTVLPHCEEAFFDWLGQLDCRNVRLYALEEGSLCFPRIPLIRVEGPLAVAQLLETPLLNLINYPSLIATNAARLRLAAGADKTLLEFGLRRAQGPDGALSASRYSYIGGFNGTSNVLAGKLIGVDIRGTHAHAFVQSYTSFEQIKDPTLDGKDFVAIVKGYRDRPVCEKASGSSNDGELAAFTAYAQAFPDGFVALVDTYDTLQSGVPNFLCVALALDDLGHRALGCRLDSGDLSYLSQEVRKMTTEAAKTFNRPFLATTNIVASNDINEESLHYLADQGHAIDTFGIGTNLVTCQAQPALGCVYKLVSIEGVPRIKLSQTTSKITIPGRKAVYRLLGADRVPILDIMLKDGEEPPQPGVPILARHPFVATMRARVTPTQVVRLQEMVWDGQAGGATSDMPTIHEVRAKVTKGLKEIRQDTLQRLNPTPYKVSVSEGLHDFLHSLWEKEAPIREL 1686
             LVP N LV  ++TD+YQITM YAYWK GRHN++AVFDLFFRK PF G++ +FAGL E +A++N+F FT SDIAYLR VLPH  + FF WL  +DC  +++YA++EGS+ FPRIPL+R+EG LAV QLLETPLLNL+N+ SLI TNA R + AAGAD  LLEFGLRRAQGPDG LSASRYSY+ GF GTSNVLAGKL  + I GTHAHAFVQ++T+ E I+   LDG+DF+ IV  +R+    E     +NDGELAAF AYA AFPD F+ALVDTYDTL SGVPNF+CVALAL +LGHR +G RLDSGDLSYLS+  R     A+  +   +    NI ASNDINE  L+ L +Q H I+++GIGT+LVTCQAQPALG VYKLV I G PRIKLSQ  SK+TIPGRK  YRL+G +  P+LD+M    E+ P+ G  +L RHPF    RA VTP+QV+ L  + WDG  GG   ++P++ + R  VT+  + IR+D ++ LNPTPYKVSVS  L++F+H LW KE P+ EL
Sbjct:    6 NLVPTNSLVGPMLTDLYQITMVYAYWKVGRHNDHAVFDLFFRKNPFHGEYTVFAGLEEALAMINTFQFTTSDIAYLREVLPHAPDEFFAWLSSIDCSTIKVYAIKEGSIVFPRIPLVRIEGSLAVGQLLETPLLNLLNFASLITTNATRFKRAAGADTKLLEFGLRRAQGPDGGLSASRYSYMAGFTGTSNVLAGKLHKIPIMGTHAHAFVQAHTTLEDIRGTMLDGRDFLGIVLKFRN----ELDFKHTNDGELAAFIAYAIAFPDAFLALVDTYDTLSSGVPNFICVALALHELGHRPVGIRLDSGDLSYLSKRCRAAFVAASDRYQIDYFKELNITASNDINEAVLNSLNEQRHEINSYGIGTHLVTCQAQPALGMVYKLVEIHGEPRIKLSQDVSKVTIPGRKEAYRLIGMNGKPLLDLMTGCNEKAPEVGKKMLCRHPFDELRRAFVTPSQVIPLHGLYWDGPQGGLVGELPSLEKRRQYVTEQFELIREDVVRSLNPTPYKVSVSNELYEFIHELWMKEYPVLEL 532          
BLAST of mRNA_Ecto-sp13_S_contig90.20552.1 vs. uniprot
Match: A0A2D4BHP6_PYTIN (Nicotinate phosphoribosyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHP6_PYTIN)

HSP 1 Score: 642 bits (1656), Expect = 5.290e-219
Identity = 318/528 (60.23%), Postives = 402/528 (76.14%), Query Frame = 1
Query:  103 PLNILVSALMTDMYQITMSYAYWKAGRHNENAVFDLFFRKCPFKGQFAIFAGLSEVIALMNSFTFTPSDIAYLRTVLPHCEEAFFDWLGQLDCRNVRLYALEEGSLCFPRIPLIRVEGPLAVAQLLETPLLNLINYPSLIATNAARLRLAAGADKTLLEFGLRRAQGPDGALSASRYSYIGGFNGTSNVLAGKLIGVDIRGTHAHAFVQSYTSFEQIKDPTLDGKDFVAIVKGYRDRPVCEKASGSSNDGELAAFTAYAQAFPDGFVALVDTYDTLQSGVPNFLCVALALDDLGHRALGCRLDSGDLSYLSQEVRKMTTEAAKTFNRPFLATTNIVASNDINEESLHYLADQGHAIDTFGIGTNLVTCQAQPALGCVYKLVSIEGVPRIKLSQTTSKITIPGRKAVYRLLGADRVPILDIMLKDGEEPPQPGVPILARHPFVATMRARVTPTQVVRLQEMVWDGQAGGATSDMPTIHEVRAKVTKGLKEIRQDTLQRLNPTPYKVSVSEGLHDFLHSLWEKEAPIREL 1686
            P N LV+ L+TD+YQITM YA+WK GRHN++AVFDL+FRK PFKG++ +FAGL E +AL+N+F FT SDIAYLRTVLP+ E AFF+WL  +DC  V+++A++EG++ FPR+P++R+EG LAV QLLETPLLNL+NY SLI TNA R + AAG  KTLLEFGLRRAQGPDG LSASRYSY+ GF+GTSNVLAGKL  + I+GTHAHA+VQ++TS E +K P L  K+ +  V  YR     E     +NDGELAAF +YA AFPD F+ALVDTYDTL SGVPNFLCVALAL +LG++ +G RLDSGDLSYLS++ R      A+ +   +    NI ASNDINE  L+ L +QGH ID++GIGT+LVTCQAQPALG VYKLV + G PRIKLSQ  SK+TIPGRK  YRL+G++  P+LD+M+   E+ PQ GV +L R+PF    RA VTP+ V+ L ++VWDG  GG    +PT+ E R  V +  ++IR+D ++ LNPTPYKVSVS  L+DF+H LW +E P++EL
Sbjct:  177 PTNSLVTPLLTDLYQITMVYAHWKVGRHNDHAVFDLYFRKNPFKGEYTVFAGLEEALALLNAFRFTYSDIAYLRTVLPNAENAFFEWLATVDCSAVKVFAVKEGTIVFPRVPMLRIEGSLAVGQLLETPLLNLLNYASLITTNATRFKRAAGPGKTLLEFGLRRAQGPDGGLSASRYSYMAGFDGTSNVLAGKLHNIPIKGTHAHAYVQAHTSLEDVKLPMLGDKNLLETVLKYRR----ELDFSRTNDGELAAFVSYAIAFPDTFLALVDTYDTLSSGVPNFLCVALALHELGYKPIGIRLDSGDLSYLSKQARAQFIAVAERYGIEYFKRLNITASNDINEAVLNSLNEQGHEIDSYGIGTHLVTCQAQPALGMVYKLVEMNGSPRIKLSQDPSKVTIPGRKEAYRLVGSNGRPLLDLMIGCNEQAPQVGVKLLCRNPFDELRRAYVTPSAVIPLHDLVWDGANGGIVGTLPTLEERRTYVQQQFEQIREDVVRSLNPTPYKVSVSCELYDFIHELWMQEFPVQEL 700          
BLAST of mRNA_Ecto-sp13_S_contig90.20552.1 vs. uniprot
Match: H3G920_PHYRM (Nicotinate phosphoribosyltransferase n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3G920_PHYRM)

HSP 1 Score: 636 bits (1640), Expect = 6.240e-219
Identity = 319/538 (59.29%), Postives = 399/538 (74.16%), Query Frame = 1
Query:   97 LVPLNILVSALMTDMYQITMSYAYWKAGRHNENAVFDLFFRKCPFKGQFAIFAGLSEVIALMNSFTFTPSDIAYLRTVLPHCEEAFFDWLGQLDCRNVRLYALEEGSLCFPRIPLIRVEGPLAVAQLLETPLLNLINYPSLIATNAARLRLAAGADKTLLEFGLRRAQGPDGALSASRYSYIGGFNGTSNVLAGKLIGVDIRGTHAHAFVQSYTSFEQIKDPTLDGKDFVAIVKGYRDRPVCEKASGSSN--------DGELAAFTAYAQAFPDGFVALVDTYDTLQSGVPNFLCVALALDDLGHRALGCRLDSGDLSYLSQEVRKMTTEAAKTFNRPFLATTNIVASNDINEESLHYLADQGHAIDTFGIGTNLVTCQAQPALGCVYKLVSIEGVPRIKLSQTTSKITIPGRKAVYRLLGADRVPILDIMLKDGEEPPQPGVPILARHPFVATMRARVTPTQVVRLQEMVWDGQAGGATSDMPTIHEVRAKVTKGLKEIRQDTLQRLNPTPYKVSVSEGLHDFLHSLWEKEAPIREL 1686
            L P N LV  ++TD+YQITM YAYWK GRHN++AVFDLFFRK PF G++ +FAGL E +A++N+F FTPSDIAYLR VLPH E+ FF WL  LDC +V++YA++EGS+ FPRIPL+R+EG LAV QLLETPLLNL+N+ SLI TNA R + AAG DK LLEFGLRRAQGPDG LSASRYSY+ GF GTSNVLAGKL  + I GTHAHAFVQ++T+ E +K  +LDGK+F+ +V  YR+     + +  S+        +GELAAF AYA AFPD F+ALVDTYDTL SGVPNF+CVALAL +LGHR +G RLDSGDLSYLS+  R+    A + +   +    NI ASNDINE  L+ L +Q H I+++GIGT+LVTCQAQPALG VYKLV I G PRIKLSQ  SK+TIPGRK  +RL+G +  P+LD+M    E+ P+ G  +L R+ F    RA VTP+QV+ L  + WDG  GG   ++PT+ E R  V +  + IR+D ++ LNPTPYKVSVS  L++F+H LW KE P++EL
Sbjct:    7 LEPTNSLVGPMLTDLYQITMVYAYWKVGRHNDHAVFDLFFRKNPFHGEYTVFAGLEEALAMVNTFKFTPSDIAYLREVLPHAEDGFFAWLSTLDCSSVKVYAVKEGSIVFPRIPLVRIEGSLAVGQLLETPLLNLLNFASLITTNATRFKKAAGPDKKLLEFGLRRAQGPDGGLSASRYSYMAGFAGTSNVLAGKLHKIPIMGTHAHAFVQAHTTLEDVKVTSLDGKNFLDVVLKYRNELGHTQTNDVSDGCRFKRLSEGELAAFIAYAIAFPDAFLALVDTYDTLSSGVPNFVCVALALHELGHRPVGIRLDSGDLSYLSKRCREALVAAGECYGIDYFKELNITASNDINEPVLNSLNEQRHEINSYGIGTHLVTCQAQPALGMVYKLVEINGEPRIKLSQDVSKVTIPGRKEAFRLIGTNGKPLLDLMTGCSEKAPEVGKKMLCRNAFDELRRAYVTPSQVIPLHGLYWDGPNGGLVGELPTLEERRQYVAEQFELIREDVVRSLNPTPYKVSVSNELYEFIHELWMKEYPVQEL 544          
BLAST of mRNA_Ecto-sp13_S_contig90.20552.1 vs. uniprot
Match: A0A1W0A700_9STRA (Nicotinate phosphoribosyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A700_9STRA)

HSP 1 Score: 633 bits (1633), Expect = 5.180e-218
Identity = 317/530 (59.81%), Postives = 394/530 (74.34%), Query Frame = 1
Query:  103 PLNILVSALMTDMYQITMSYAYWKAGRHNENAVFDLFFRKCPFKGQFAIFAGLSEVIALMNSFTFTPSDIAYLRTVLP-HCEEAFFDWLGQLDCRNVRLYALEEGSLCFPRIPLIRVEGPLAVAQLLETPLLNLINYPSLIATNAARLRLAAGADKTLLEFGLRRAQGPDGALSASRYSYIGGFNGTSNVLAGKLIGVDIRGTHAHAFVQSYTSFEQIKDPTLDGKDFVAIVKGYRDRPVCEKASGSSNDGELAAFTAYAQAFPDGFVALVDTYDTLQSGVPNFLCVALALDDLGHRALGCRLDSGDLSYLSQEVRKMTTEAAKTFNRPFLATTNIVASNDINEESLHYLADQGHAIDTFGIGTNLVTCQAQPALGCVYKLVSIEGVPRIKLSQTTSKITIPGRKAVYRLLGADRVPILDIMLKDGEEPPQPGVPILARHPFVATMRARVTPTQVVRLQEMVWDGQAGGATSDMPTIHEVRAKVTKGLKEIRQDTLQRLNPTPYKVSVSEGLHDFLHSLWEKEAPIRELS 1689
            P N LV+ L+TD+YQITM+YAYWK GRH E A FDLFFRK PFKG+F +FAGL EV+  +N+F FT SD+ Y+R VLP   E  FFDWL  LDC NV++YAL+EG++ FPRIP++R+EG L + QLLET LLNL+NY SL+ATNA R   AAG DK L EFGLRRAQGPDG +SASRYSY+ GF+GTSNVLAGKL G+ I+GTHAHAFVQ++ S + +K   LDG DF A+   YR +   E    ++NDGELAAF +YA AFP  F+ALVDTY+TL SG+PNFL VALAL +LG++  G RLDSGDL+YLS+E R+  TEAA TF  P  A   IVASNDINE  L+ L +QGH ID+FGIGT+LVTCQAQPALG VYKLV I G  RIKLSQ  SK+TIPGRK  +RL+GA+  PILD+M++  E  P P   +L RH F   +RA VTP++V+ L  +VWDG+ GG    +P++ E+R  V   +  +R D ++ LN TPYKVSVS  L++F+H LW +E P+REL+
Sbjct:   11 PTNALVTPLLTDLYQITMAYAYWKVGRHTEEATFDLFFRKNPFKGEFTVFAGLEEVLFFVNAFKFTKSDVDYIRDVLPPSTEPGFFDWLLSLDCSNVKIYALKEGTIAFPRIPVLRIEGHLGITQLLETGLLNLLNYASLVATNATRFIKAAGKDKILFEFGLRRAQGPDGGISASRYSYMAGFHGTSNVLAGKLFGIPIKGTHAHAFVQAHRSLDDVKQTMLDGVDFKALTLKYRAKMQAE----NTNDGELAAFISYALAFPQAFLALVDTYETLSSGIPNFLAVALALHELGYKPNGIRLDSGDLAYLSKEARRQFTEAANTFGIPEFAKLTIVASNDINEAVLNSLNEQGHEIDSFGIGTHLVTCQAQPALGMVYKLVEISGQARIKLSQEPSKVTIPGRKQAFRLVGANGSPILDLMMRCEEPNPSPNHRLLCRHAFDEMVRAYVTPSKVIPLHHLVWDGKNGGIQMTLPSMQEIRQYVANQIHVMRSDVMRPLNATPYKVSVSPDLYEFMHQLWAEEFPVRELN 536          
BLAST of mRNA_Ecto-sp13_S_contig90.20552.1 vs. uniprot
Match: A0A5D6XIL7_9STRA (Nicotinate phosphoribosyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIL7_9STRA)

HSP 1 Score: 634 bits (1634), Expect = 8.250e-218
Identity = 322/555 (58.02%), Postives = 399/555 (71.89%), Query Frame = 1
Query:  103 PLNILVSALMTDMYQITMSYAYWKAGRHNENAVFDLFFRKCPFKGQFAIFAGLSEVIALMNSFTFTPSDIAYLRTVLPHCEEAFFDWLGQLDCRNVRLYALEEGSLCFPRIPLIRVEGPLAVAQLLETPLLNLINYPSLIATNAARLRLAAGADKTLLEFGLRRAQGPDGALSASRYSYIGGFNGTSNVLAGKLIGVDIRGTHAHAFVQSYTSFEQIKDPTLDGKDFVAIVKGYRDRPVCEKASGSSNDGELAAFTAYAQAFPDGFVALVDTYDTLQSGVPNFLCVALALDDLGHRALGCRLDSGDLSYLSQEVRKMTTEAAKTFNRPFLATTNIVASNDINEESLHYLADQ---------------------------GHAIDTFGIGTNLVTCQAQPALGCVYKLVSIEGVPRIKLSQTTSKITIPGRKAVYRLLGADRVPILDIMLKDGEEPPQPGVPILARHPFVATMRARVTPTQVVRLQEMVWDGQAGGATSDMPTIHEVRAKVTKGLKEIRQDTLQRLNPTPYKVSVSEGLHDFLHSLWEKEAPIREL 1686
            P N LVS ++TD+YQ+TM Y YWK GRHNE+AVFDLFFRK PFKG++ +FAGL E + L+N+F FT SDIAYLR VL + E+ FF WL  LDC ++++YA++EG++ FPRIPL+R+EG LAV QLLETPLLNL+N+ SLI TNA R + AAGADK LLEFGLRRAQGPDG LSASRY+Y+ GF GTSNVLAGKL G+ I GTHAHAFVQ++T    +K P LDG DF+ +V  YR    C +    +NDGELAAF +YA AFP  F+ALVDTY+TL SGVPNFLCV+LAL +LG++ +G RLDSGDL+YLS++ R    EAA  F   + AT +I ASNDINE  L+ L +Q                           GH ID +GIGT+LVTCQAQPALG VYKLV I+G PRIKLSQ  SK+TIPGRK  YRL+G++  P+LD+M+   E+PP  G  +L R+PF    RA VTP+ V+ L  +VWDG  GG    +PT+ E RA V    + IR+D ++ LNPTPYKVSVS  L+DF+H LW KE P++EL
Sbjct:    8 PTNSLVSPMLTDLYQLTMVYGYWKVGRHNEHAVFDLFFRKNPFKGEYTVFAGLEEALGLINTFKFTESDIAYLRLVLTNAEDEFFTWLATLDCSHIKVYAIKEGTIVFPRIPLLRIEGNLAVGQLLETPLLNLLNFASLITTNATRFKRAAGADKKLLEFGLRRAQGPDGGLSASRYAYMAGFAGTSNVLAGKLHGIPIMGTHAHAFVQAHTDLGDVKVPVLDGHDFLGLVLKYRKELDCLR----TNDGELAAFISYAVAFPSQFLALVDTYETLTSGVPNFLCVSLALHELGYKPVGVRLDSGDLAYLSKQTRAAFKEAAARFGVAYFATLSITASNDINEAVLNSLNEQVRATACGARVAATVALVLMQTLLRTPQGHEIDAYGIGTHLVTCQAQPALGMVYKLVEIKGEPRIKLSQDASKVTIPGRKEAYRLVGSNGSPLLDLMVGCDEKPPGIGKKMLCRNPFDELRRAYVTPSSVIPLHHLVWDGAHGGIVGSLPTLEERRAYVAAQFEFIREDVVRSLNPTPYKVSVSSELYDFIHELWMKEFPVKEL 558          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig90.20552.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLE6_ECTSI0.000e+098.52Nicotinate phosphoribosyltransferase n=2 Tax=Ectoc... [more]
A0A836CCF5_9STRA1.440e-23662.98Nicotinate phosphoribosyltransferase n=1 Tax=Tribo... [more]
K3WM81_GLOUD1.960e-22561.32Nicotinate phosphoribosyltransferase n=1 Tax=Globi... [more]
A0A3R7HCJ9_9STRA1.420e-22459.44Nicotinate phosphoribosyltransferase (Fragment) n=... [more]
A0A8K1CGD6_PYTOL1.360e-22260.98Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484DZT0_BRELC1.550e-22160.26Nicotinate phosphoribosyltransferase n=1 Tax=Bremi... [more]
A0A2D4BHP6_PYTIN5.290e-21960.23Nicotinate phosphoribosyltransferase n=1 Tax=Pythi... [more]
H3G920_PHYRM6.240e-21959.29Nicotinate phosphoribosyltransferase n=22 Tax=Pero... [more]
A0A1W0A700_9STRA5.180e-21859.81Nicotinate phosphoribosyltransferase n=1 Tax=Thrau... [more]
A0A5D6XIL7_9STRA8.250e-21858.02Nicotinate phosphoribosyltransferase n=1 Tax=Pythi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig90contigEcto-sp13_S_contig90:23696..34451 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1068.1
Seed ortholog evalue1.3e-309
Seed eggNOG ortholog2880.D8LLE6
Preferred nameNAPRT
Model size2431
KEGG rclassRC00033
KEGG koko:K00763
KEGG ReactionR01724
KEGG Pathwayko00760,ko01100,map00760,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006955,GO:0006979,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0012505,GO:0016192,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0030141,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032940,GO:0034356,GO:0034641,GO:0034654,GO:0034774,GO:0035578,GO:0036230,GO:0042119,GO:0042582,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046483,GO:0046496,GO:0046903,GO:0050896,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0055086,GO:0060205,GO:0070013,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097708,GO:0099503,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons14
EggNOG free text desc.nicotinate phosphoribosyltransferase activity
EggNOG OGsCOG1488@1,KOG2511@2759
EC6.3.4.21
Cds size1626
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig90.20552.1prot_Ecto-sp13_S_contig90.20552.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig90 23762..33712 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464173.3742394-UTR-Ecto-sp13_S_contig90:23695..237611681464173.3742394-UTR-Ecto-sp13_S_contig90:23695..23761Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig90 23696..23761 +
1681464173.5585446-UTR-Ecto-sp13_S_contig90:33712..344511681464173.5585446-UTR-Ecto-sp13_S_contig90:33712..34451Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig90 33713..34451 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464173.397175-CDS-Ecto-sp13_S_contig90:23761..238181681464173.397175-CDS-Ecto-sp13_S_contig90:23761..23818Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig90 23762..23818 +
1681464173.4067237-CDS-Ecto-sp13_S_contig90:24307..243791681464173.4067237-CDS-Ecto-sp13_S_contig90:24307..24379Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig90 24308..24379 +
1681464173.4162488-CDS-Ecto-sp13_S_contig90:24648..247091681464173.4162488-CDS-Ecto-sp13_S_contig90:24648..24709Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig90 24649..24709 +
1681464173.4302065-CDS-Ecto-sp13_S_contig90:24975..251721681464173.4302065-CDS-Ecto-sp13_S_contig90:24975..25172Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig90 24976..25172 +
1681464173.4476519-CDS-Ecto-sp13_S_contig90:25611..257581681464173.4476519-CDS-Ecto-sp13_S_contig90:25611..25758Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig90 25612..25758 +
1681464173.4587443-CDS-Ecto-sp13_S_contig90:26287..264371681464173.4587443-CDS-Ecto-sp13_S_contig90:26287..26437Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig90 26288..26437 +
1681464173.4704633-CDS-Ecto-sp13_S_contig90:27055..272941681464173.4704633-CDS-Ecto-sp13_S_contig90:27055..27294Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig90 27056..27294 +
1681464173.4801557-CDS-Ecto-sp13_S_contig90:27820..279891681464173.4801557-CDS-Ecto-sp13_S_contig90:27820..27989Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig90 27821..27989 +
1681464173.4900293-CDS-Ecto-sp13_S_contig90:28466..285891681464173.4900293-CDS-Ecto-sp13_S_contig90:28466..28589Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig90 28467..28589 +
1681464173.5088933-CDS-Ecto-sp13_S_contig90:29376..295101681464173.5088933-CDS-Ecto-sp13_S_contig90:29376..29510Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig90 29377..29510 +
1681464173.5201185-CDS-Ecto-sp13_S_contig90:31380..315011681464173.5201185-CDS-Ecto-sp13_S_contig90:31380..31501Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig90 31381..31501 +
1681464173.5289555-CDS-Ecto-sp13_S_contig90:32294..323271681464173.5289555-CDS-Ecto-sp13_S_contig90:32294..32327Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig90 32295..32327 +
1681464173.5380795-CDS-Ecto-sp13_S_contig90:33052..330971681464173.5380795-CDS-Ecto-sp13_S_contig90:33052..33097Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig90 33053..33097 +
1681464173.5477216-CDS-Ecto-sp13_S_contig90:33634..337121681464173.5477216-CDS-Ecto-sp13_S_contig90:33634..33712Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig90 33635..33712 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig90.20552.1

>prot_Ecto-sp13_S_contig90.20552.1 ID=prot_Ecto-sp13_S_contig90.20552.1|Name=mRNA_Ecto-sp13_S_contig90.20552.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=542bp
MPSSREDVKGLVPLNILVSALMTDMYQITMSYAYWKAGRHNENAVFDLFF
RKCPFKGQFAIFAGLSEVIALMNSFTFTPSDIAYLRTVLPHCEEAFFDWL
GQLDCRNVRLYALEEGSLCFPRIPLIRVEGPLAVAQLLETPLLNLINYPS
LIATNAARLRLAAGADKTLLEFGLRRAQGPDGALSASRYSYIGGFNGTSN
VLAGKLIGVDIRGTHAHAFVQSYTSFEQIKDPTLDGKDFVAIVKGYRDRP
VCEKASGSSNDGELAAFTAYAQAFPDGFVALVDTYDTLQSGVPNFLCVAL
ALDDLGHRALGCRLDSGDLSYLSQEVRKMTTEAAKTFNRPFLATTNIVAS
NDINEESLHYLADQGHAIDTFGIGTNLVTCQAQPALGCVYKLVSIEGVPR
IKLSQTTSKITIPGRKAVYRLLGADRVPILDIMLKDGEEPPQPGVPILAR
HPFVATMRARVTPTQVVRLQEMVWDGQAGGATSDMPTIHEVRAKVTKGLK
EIRQDTLQRLNPTPYKVSVSEGLHDFLHSLWEKEAPIRELS*
back to top

mRNA from alignment at Ecto-sp13_S_contig90:23696..34451+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig90.20552.1 ID=mRNA_Ecto-sp13_S_contig90.20552.1|Name=mRNA_Ecto-sp13_S_contig90.20552.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10756bp|location=Sequence derived from alignment at Ecto-sp13_S_contig90:23696..34451+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACGCGGCTGTGCCAACTGCTGTAGTGCAAACACGCTCTCCTCTGCCCCTC CTTCGTTCTGTCAGCAATGCCTTCTTCGAGGGAAGATGTAAAGGGGCTCG TCCCACTCAACATCTTGGTGTCGGTGAGTTGGGGTCCTGATCAATGTTGC AACTGGTTGAATGTATGCGTACATTCCGTTCATGTTCCAACTCAAAAGGT TGGTTGAAGATGTACTCCTAAGTTGTACTTCCCTCCTGTAGTAGCGCTTT AGCTCCTACGCGGCTGTGGCGCTGGTGTGCCATCTGCGCTTCAGCCAGAC ATCAAACTCTTTAAGCTGCTGGTAATGTGTTTTTGCACGTCGCAGGCTAC ATTTGCCATGTACCTGGCTGCCATCTGGAACGGTTTGTAAGTATCAGCGG TACACAGCATCAGTTGTTGCCGGTTCGACATTTTCGGAACCAAATCAAGC CCACGAGCTTGCTGACTACTCCTTTAGCAAGCATCTACTAATGAGTGTAG GAATGAACTGCTGCTGCTGCTGCTGGCGACTCCAAACGCAAAATATCCGG CACAATCAACCAACGCACCCCCGCCTGCATTTTATAAACACGTGCTTTGT TTGCTGTTTCAGGCGTTGATGACGGACATGTATCAGATTACGATGTCGTA CGCGTACTGGAAAGCTGGGCGGCACAACGAGAATGTGAGGAGACAAAAGT AGCAGGGTCCATTCACAATATTCCTTTTGGGAATTCGGTCTCATTCGACT CACCGGCTGTTAGGAGCGAACCCCTTGTGGCTGTTCTGACCTTGTACAGC ACGTAGGCTTTTGTCTACATTGCCTACGCATGCCTACGCATGTGAACTGT AGCAGCAACAGTCTGCACATCATTTACCTGTAGCACAACGTCCAATGTAC AGCCGCTGCTTCCACCCTCTTTCATTGTGGACTGTCGATCCGCGTATGTC CAGGCGGTGTTCGATCTGTTCTTCCGCAAGTGTCCCTTCAAGGGCCAGTT CGCCATCTTCGCAGGTGTGGTACATTCTACGCTACCGGGTGGGCTCCTCA CACTGCGTTCTGTAGTTTGCCACTCCCTCCGTAATACATCAGCGAAAGTC AACAACCCATTGGAGTTTGGATTTTTGTTTTTGGGATCTCACCGCCTTTT GTGTAGGCGAGCGCCGGCCGTCTCGCCGTTGTACTGCTCTAGTTCCAAAC GATTTACCATATTTTGGACCCCATGCACCGTACGTCATCAGGGCGTCACT CTTGCTCCCACCATTCGCACGACCGTCCAGGTTTGAGCGAGGTGATCGCA CTGATGAACAGCTTCACCTTTACCCCCAGCGACATCGCCTACCTGCGGAC GGTTCTCCCTCACTGCGAGGAGGCATTTTTCGACTGGCTCGGGCAGCTCG ACTGCCGAAACGTGCGCCTGTACGCTCTGGAGGAGGGCTCGCTCTGCTTC CCCCGAATACCGCTCATTCGGGTTGAGGTGGGTGATGGTACGGCATGAGA AGAGATGGTGCGCACGGGGTGATGCAATTTCGGTAATGTGGCAGACAAAC AGGCATGCCTTTTGAAAATAATAGACTTATGGTACGCTCATCGCGTTCTT ATGTGAATTCTTGGACTCTCCCAATGCACAAGCCTCCGTGTCGAAGCGTT TTTTGTTGAAGCAACGGTAACCTTTCTAACTCTGTGTGGCGACCCTGTTT TCCTCTTCCCTGCATTTCGTTTCAGCTTGCCGCCCGAGCCTCTTACCCAT TGGCGGACCGGAAAGCCTCCCTACCCCAAACACGTTTATTCGTAGATGGT CGCAAACACAAGCTCCAAACCCTGGACGTCTCAATGTGCGTCGTTTCTCC TCCGTCCTACTCCGGCCCCGATGTTGTGCTTCTTGCCTGGATGCACGGAC TATGCTGAAACAACAGGGTCCGCTAGCTGTGGCGCAGCTTTTGGAAACCC CGTTGCTGAACCTCATCAACTACCCGTCGCTCATTGCCACCAATGCGGCC AGGCTGCGGTTAGCGGCCGGGGCGGACAAAACCCTTTTAGAGTTTGGACT GCGGCGGGCACAGGTGCGATAGGGAATGCCTTCCGTGGACCGAAGTTTTT GTTTTCGTGCTGGGAAACGATGTTCGTAGGAGGTCTCTGCCACTACTTCT GTACTTGATTTTCCGACGGTTATAGCAGAACAGTGGTAGAAAGCTTTCGG TTGTTTGACAAATGAGGCGCCCTCAGTGAGGAATGGTCTTGTACGCAATG ATTTACTTTTCGCGGTATCGAACTATTTTCTCAAGATAAATCGGTACTTG GTTCCGTCGAAGGGATAAAATCAGCTGGTGCAATCGAGGTACAACATTAT ACCGCCGGGGTTCGTGAGATATATTTCTCACGCACACGGTTTCGCAATTA TGAAGGACATACGAAGGCCGTGGCGGGTGATGAAAACGATGACTCTATTC ACATCAAGCACGGTGACAGGGGCTCACCTTGGACGGAAGGTACACACATG TCTGCTAGACGAACGATCTGCAGGGTTTCCATGGTTGAGTTCTGGTCTGT TGATATTGACCACGTGCTTTTGTCTCCCCTTGACTCTGGCAGGGTCCGGA CGGAGCCCTGTCCGCTTCTCGTTACTCGTACATCGGGGGGTTCAACGGCA CCAGCAACGTTCTCGCGGGGAAGCTAATTGGCGTTGACATCCGAGGCACG CACGCCCACGCTTTCGTGCAATCCTACACTTCTTTCGAACAGGTGCCCGC GGCAGTATTTGGCACCCACGAGGCGGTCTCAAGGCCTCACACCTGTGCGC TTGCGGAGGGAGAGCACCTTGTATCAGTTGAACTTATTCGTTTTCTTTGT CAGCGTTGGTTGGACAAGAAGGGGAGGAGAAATCCGTACCATATTTTCGG CGATCCTTGTGTTGTTCACTTGGTGTAGTCAAGCAACAACAGTCTCGTCT GGTTGCGTTCCACCGGCACCTTTCCAAGATTGTTGCCCACATCGTACAAC GCCCACATTTCATACGCATCTATCTTTGCACGGAGCTACCACTCCTACTT GGGTAAGGTGTTCTCGTTAGTTTGTGTATCGTTCATGCCTCAGGATTGCG CCCCGCCGGGGTGAGGGGTGACAAGACCAAGACGCAAGAGGCGAGGTTCG CCGTCTCTTCTTGCGTCTTGATTGATACTACTCTCCCCGATCCCCCAGTT GCACCCTCAGGCGTTTATCTCTCACAAACGTTTTCACCGGCAACCTCGGT TGCCCGGGAGCAAAACTGTCTACCTTTTTCTTCGCGGATGCGTAGCTTGT GTTTTGGTGGGTACGATGACGCCTCCCGCGTTTTCCTTGTTTGTTGGCGC GCACACGTAGATCAAGGATCCCACCCTGGACGGCAAGGACTTCGTCGCGA TCGTCAAGGGGTACCGTGACCGCCCGGTCTGCGAAAAGGCCTCCGGGAGC AGCAACGACGGCGAGCTCGCGGCGTTCACCGCGTACGCCCAGGCGTTCCC CGACGGCTTCGTCGCGCTCGTGGACACGTACGACACGCTCCAGTCCGGGG TACCCAACTTCCTGTGCGTGGCGCTGGCACTGGATGACCTGGGGCACAGG TGCGTTCGGCTAGTGTGGTTGGTAGTGGTAGTGGTAGTGATGGCGGCTGC GGTTATGTTTGGTCTTAGTTGTTTTGTCTTTGTCGCTGTTGGAGCGGTAA CGGTGATGGTGGGGATGACGGCAGTGATGGTGAGGTTGCTGTTGCCGAAA ATATGTCTCGCGCCGTTTTTTCGAGCTTGTGGTCACCACTCGAACCGATT GAACCCGACATCGTGACACGGGCTTTTGACTCGGCAAAGACGAACGCCGA AGTGCTTTCGCCGTGTGGGTAGCCGGCTCATACGAATAGCACACATGCCG TGAGAGAAGCAACACGTATTCATAACTTGACATTGAAGTTGGGCTGAGCG TATCGAGCACTCGGAACAGGTGTTTAGCGTGCTGCATGAAGGGGCTTGTA CCCAACCGGGGCACAACTAAATATATTATCAACGCAATTTCTGCCATGAC GATAGATTGGCGTAGGCATAGTTTGACGCACGATTACTCACCTACCCTGT GTTTGGGACTATTACTACTTCGAAGGGCGCTGGGGTGCCGGCTGGACTCC GGGGACCTGAGCTACCTCAGCCAAGAGGTGCGAAAAATGACGACCGAGGC TGCGAAGACCTTCAACCGCCCGTTCCTTGCCACCACAAACATCGTGGCCA GCAACGACATCAACGAGGAGAGTCTGCACTACCTCGCTGACCAGGTGAGG TTCCTCTCACGTGTCCTACTTGTATGCGTCTTGTTTCTTTGCTTTGTTTC CGACGGGCTCTGCTGTCCGAAGGTGTTTCGTTGTGTTTGACGACGACAGG ACGCGCACTTCCCCTTTTGTGCGTCCGCTTTCGAAGAACATCGAGAAGGG CAGGGGGAACGACATCCGTTCTTTTCTTCTCTCCTACGGATGCGTTTGCT TTTGGCGGTGTGCTCTACCGGCGTTCTTGAGCGCGGCTCCACCGCGATCA CCCGCTCACTCGCTGCCTTCAGGGACGGGTATGTGTTTCTTCACCGATTC CTGCGGCAGGGGGAACCTGTCTCTCACGCGTTTTCACGTTGGATTGTTTC ACTCGTTGCCATCGGGTACCACCTCTACTCTCGTGGGCGAACAGGGGTCA ACATGAATCTGTTCATGAACTCGCTCTCCTGATTGTCTGGCTCCACACGC GCACATCGCTCACTCGTGCAGGGCCACGCCATCGACACCTTCGGCATCGG GACGAACCTAGTGACGTGCCAGGCGCAGCCGGCCCTCGGCTGTGTGTACA AGCTGGTCTCCATCGAGGGTGTGCCCAGGATAAAGCTGTCGCAGGTGACC CCCCGCCCCCTTGCCCTCGAATCGTTCACCGACCTTGTGCAATACTCCAA TGAAATGTATGCAGCGTCTTCGACCGCGAGCACCTTTTTCTCCACTTCAA GTCAAGCCGAGCCGATATCGGAGAGTAGTAGCAGCACACGCACCGTCATC GCGTTTCGCGTGGCGTTATGCCTCGGGGGGTTTCTTGGGCTGGCCCTGGT ACCGTGAGGGAACGACATGGCATCAGTTCAGAGTTCATCCATCGCCGGCC GGAATTACTCGGGCACACGAGACCACCACCTAAAGACTGTTGCCCCGGCG TCCTTGCGGGGATGCGGTGGTGGAACACAAGATGTACCAGGCTACTGGGC CTGGTCGGAGGAATAACAGAGCAAAGAGACAGCATCCAAATCCTTCAAGC CAGCGTTTCTTGTTTTTCGACCTGATCGCCAGATTTTGTCCCACGTCCTC ACCGGTTCCTTCGTCCCCTTACCGAAGCACTAGTTTCATCCTGAGACCGA AAAGAAAAGGTGGACTTCGCGAGGAGTATTCCCACAGCAAATTCGTTGTG ATATTCAATCTATCGACGACCAGACGAAGCATGCATTGGGACACCCTTTC TATCCGGGCTTGGCTCGAAGCCACCGCTCGTGCCTTACATGCCTCCCAAG CCACTTCAATGACTAAAACAATCTCCTCAATGAAGAAGGCTACCTTCTCT CACCGTCCCTCTGCTTCTACGCTTTGCTACGCGCCGGGTCGACCTGCGGC ACAACGGTATTTTCGGCACACTGGGAGTCAGACGACGTCAAAGATTACCA TACCGGGCCGCAAGGCGGTATACAGATTACTGGGCGCCGACAGAGTTCCC ATCTTGGACATCATGCTCAAAGACGGGGAGGAGCCGCCGCAGCCGGGAGT CCCCATACTCGCGAGGTACATGCACATCGATGGTACCTTGAGCGCTTATC GTAGACGACGTGGTTGAAGGGTTATGTTAATTCCGAGAGAGTTGCCAGTG AGGGAGACCACCGCATGGAGCGAGTCATCCTCGAGGCGCTCGGAAAGTGG GGAACTCGGGCGAACGCATGCTGCAGGAAACCGATACATCCTATTAATAT GGGGCCAATGTGCGCTTTCAACCTTGCCGATATATTAAACACACAGCTAC GTTGCGGTACAACTCTGAACTCGTTGCTGAGGTACCGACAAGGCATCGGA GATATTGCGAAAAGGGTCTGCTCCACTCTTGGCCTCAACAGTTGTAATCA TTACTCATTAGGTTGAGTCATCAAGATAATCCGGGTAAAGGAAACAGCCA CCTTAAGAGGGATTCGATTCGGCAAACCAGGCACCTGGTGCTCTCCCGCG CGTGATTGGGTTATATTTATTTCTCGAGGTGCGTCGATTTTCCTCACGTT TCCTTGAGATGTCTTGCTCTATGCTCTATGCGAGCGTAAGCAATTGCTTA CAGTCCTCGCCACCCTAACAGCACTTGGGGTGTGATCCATCTGAAGCCAG GTATGGCCGTATACGAGCTTGGTTTTCCAGGCGTAAGCCCAGACTTTTGT GGTCGGAGATTGGTATTTGTTTTCCGTCGCTTACTTTCTGTGCACGTTCG GTTAAATCTAGGTGTGTTTGCTGGAGAGCAATTCGCGTTTTTTTCTCGTG TTTCTCCAAGACGGCAGGTGTAGGTTGCCATTTAGCAACCTGCAAAAGTA TTTCAGCGTGTCACCACCACCTCACACCCAATTCTTTCATCACCTTCCGC GTTCAAATGCTCAACCGTCTCTGTGTGTGAGGAGCCTTGTATGGTGTACT TCTTTTGTGAACGTCGGTGGAGCAGATACTGACTATTAGTCGAGCGCTTT TAGATGTTGACTGCCGGTGTCGCCGCAGGTGTTGCTCCCCATAGGCAAGC ACACGAAGAACAAGCAACGTTTTCAGCCCCTCTCCAGTGTAGACCTGGTT GAGCTCAGCGCGGCCGCGACCTCGTGCTGCTCCCACGGGCATCGGCGTTC CATGAAAGCAGAGCGGCGTCTGAAGCACGTCAAACCCTCCGTCTGAATGC CGTTCATGTGTGCCCCATGAATTCCCTTTGAAAGGGAAAAATGCCGCGCT ACCACATCTGAATCGGAGCCGATTCCCGCTGGTGCACGCGACTCTGTCAG CTCGCCTTTAGTGCCAATGTTTCGCCGCCTCGATAAAGAGCCCCGATGTA GCTCATATTTCACCGTGATATGCATCGAGGTGAAGAGATGGAGGACTACT GTACCTCTCGGATCGTGGTCCCTTTTTTTGTTGCTTTTCGTTGGTAAAAA GAAACATGCGTTTTGTTGCCGTAGGAAGCAACGCGTGTCACCGCACAGCA TTGCGCCATGCGGTAGCAACTCCGGCATCTTAGGTCCTCAATTGTTCCCG GCATATTGTTGGGGCTTGTGACATGCTGTTGGGGCTCCTGAGAATTTGTT GGGACTCCCATGTCTTTGAGATGCTGCGGATGTCAGACCGTTTTCCGTCT ACTTTTGAGGTGTGCAAAGAACATATGATTCTCACTAGTGCGCGCGGGAT GAAGCGGTTTGGTAAAATTGGTAATACATGAAGCAAAAAGCGGAGGGGGA TTGCTCCGTGCTTTGTAACAGTCGATAATCACGGAGGCTGGTTGCTGCTC TGCTGACGTTTCGTGAGGAAGTACAGCAGCGCAACTAGTAATTTCTTGCA TCTGCTGAATATATTGCTGCTACTACTGCTGCTGCTGCTGCCACCGCTGC TTCTTGCTGTATTAAACTTTTTCCAACTTGATCAGACACCCGTTCGTGGC AACTATGCGCGCGAGGGTGACACCGACCCAGGTAGTCCGATTGCAGGAGA TGGTGTGGGATGGCCAAGCTGGAGGTGCAACCTCGGACATGCCCACCATC CACGAGGTATATATATGGATTGGCCAGAAGTCAATACCGTGTTCGGTTGA CCGCCGGTGAAAACTCGATATCACTTTCCGTGTACTCTCAACGCACAGTC AACACTAACAAAGATCTTGGCGATGGTTGACCCCTGGTTGGTTTTCCCCC AGTATGGATGAGAGAAACGCTTGCACACATACTAATTTGCTTGTTATTCA GTACCTCCTGGGAGGGCGGTGGACACAACCGGGGGGGGAGAGAGTTGATG GTATCTGTGCGACCCCTCCAGCTCTCCAAATACTCTGTCATGTTGGCGAG GTCGAGCGATTCCTGAAGAGGGGCACCATCGTAGAGTAGGTGCATCCACC GACGAACTAGTGCAAGACGAAGACATACGGTCGTGAAACGTCAGGTGCAC CTAGGGTAGGAGTGGACTGCGTTCTGTGGTTTTCCTTGTGAATTCCTTCT GCAGGGTACATGTCGATGGCAGAAAGTCCCACGGCTCTTCCAATGCATGC ATATCTTCCAGTAGCACGGCGCATGTAGATGAGGAGCCACTCGGGCGAAA ACGCGTACTGGGATGCTTGTTTGGTGGTGATGGGACAGCCAGAGGCGATT TCATTTAAACAGTATCGTCACGTGCGGAGGGGGAAGAGGAGGAGGAGGAG GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAATGTGCCTTCCCACAAAT GCTCTCGTTTTTTGTCGTCCCAACACCTTCGTGTACCCGCAGACAAGACG TTTCCTTCTTGTGCGCGTTTTCGCTTTTCGTTGTTTCGCTTTTGGAAAGG TGCGAGCGAAGGTGACAAAGGGGTTGAAAGAGGTGAGACTAAGAACAAGG AGACCCTTTGCTTGGGATACGCGTTCCACTGTAGCCGAATATACCTGCTG ATGTAACGGCCGCTCCGCATCCGAGATCGCGTAGATGTTTTCATCCGCAC TGGCTTCAAGGTTTTTGACTCGACAACAGGAGGTTCTGCGCCGATCATTC GTTGAAATGGTGTTGCGGCTGGACGGACGGGTCGACGTTTAACTGTGCAG CCCATAGTGAAATACAATCGACCAAGAAAAAACGTGTACGCGTTCTGAGC TGCGGTAGAAGCTCTGGCGCCGCGTGAACGGGCGAATAGTATCTGCAGCC AAGACGGCGCCGCGCTCTCACGCTTTCCAGTTGTTTCGTAACCAGTCCGG GTATTGACCGTCCAGCGGCGTTGTCTTCGATCGGGCTCACAACAGCGAGA TGAGAGAAGACGAGACTGCCTCCTCTTGCGCGGTGTTCTTGTGCCTCGAG ATGCTACTATAATTCCATCTTTGGGCACGCTTTGGTTCGTTATCAGAGCG TCTGCACCGGCCAGAGTTGGGTGCCTAGCCTAGATTGATTGACGGCTTTT CGCATGCTTGCCTTTCTTTTCACACCCAGGGGGAAGCTCCAGTGGGCGTG ACTTTCGCTCAACCTCTGCTATTTTGGTGTCCTGTGTGCTGCGTACGTGC GCTTGTTGTGTGGCGTTTGTTCCCTTGTTCTCTCCCTCTGAATTCTCGCA TGGTCAGATTCGGCAGGACACGCTCCAGAGGCTCAACCCCACACCGTACA AGGTGTGTCGGACAGTAAATGCAAGCTCCGAACGTACTTTTTCGAGTATT TTTCAGTGCCCAGTGGATGGACGGTTTCGTCGTTTGCGGCTTCCGGTTTG CTTTCAGCAACTTTCATTGAGTTGGCGCGCGCGCAGACGTTTGCTCAATG GGAAGACTCCATGCCATCCTGGTTTGGAGAGGCAGCAAGGCGGACCGTCG TGAACGGAGACTCTTTGAAAGCCCTTGCTATGAAAGCTGGTTTGCAACAG ACACACATCACACACAGAGAGGGAGACAGAGGGAGAGAGAAAGAGAAAGA GAGAAAGAGAAAGAGAGAGATATAACCACGGGAACTTCCGGCGTTCAATC GTTACGGCTCCAACTGCTGTAAGTTTCTTCTCGCGACGAAAATTCGGCGT GCTTTGTCGTGTCCATTTTGTTTTTTTTGCAAGAAGACTGGTTATTGGTA GCACACACCCTGATGCGGTTGGACATACGCGAAAATTCCCGTGCGCCCTT CCAACCCCGTTCTAATGCTCTGCTTTTTGTCGTCATCAGGTGTCCGTGAG CGAAGGCCTGCACGACTTTCTGCACTCACTGTGGGAAAAGGAGGCACCCA TTAGGGAGCTCAGCTAAATTAACGACGGCAAATATTACGAAAAACGGGGG AATCCAGCGGTGTGTCTTGCATGAGTGTTTGCTATGCAGTCTTGCTAAAA AATTAAGTTGTACGAAGCGGAGAACGTGAGTGGTATTTATTGCTTTGCCC AAAGGAAACGAGCGTGCGGTCGTGTTTCAACGTAACGCTTCGTGGCGCCT TGTCGATTCCAGCATGCCCCCTCTCCGTCCCAGCGCTTCTTCCACTGGCT CCCGACTTGTGTACCCCACCATGACCCCGTTCCGGTGTGTCAACGGGTCT CTCTTCTCTCCTGTTGCCCTAGAAGCCGGGGCGTCACTTTGGTGGAAGTC CCGGGCCTGCATTATTCTACGCCCTAGGCCTGATCGGGGTGTCGTTTCGG ACAGGGGCACATGTATTGTCAAGTTCGTGTTTCGTTCACGTTGGGTTTGG GCAGGGACAGAGATACGCTAGCGTGGCATGATGAAGTCTTGGAGGCCCAA CGAAAACGGTTGAGCATCTCCAGATTTACGAGCAGAAACAAGTTTAGGCA GGCAAAACTGGGAATGGTGGAACGGGACAGAATCGTACAGTGACACTTCA AGGAGAAATGGACAGCTAGGATTTGAGCGAAGTTTAGGAAGGAGTATATT AGGGGCGGTGATGTACAGTAATGTGGCAGCAACAGAGTTCACACTGCAGC TGCTCCCACAGGGCGCCTGGTCCACTCTCGAGTCCAATAGTGAGTACAAC GCGGGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig90:23696..34451+

>mRNA_Ecto-sp13_S_contig90.20552.1 ID=mRNA_Ecto-sp13_S_contig90.20552.1|Name=mRNA_Ecto-sp13_S_contig90.20552.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1626bp|location=Sequence derived from alignment at Ecto-sp13_S_contig90:23696..34451+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCTTCTTCGAGGGAAGATGTAAAGGGGCTCGTCCCACTCAACATCTT
GGTGTCGGCGTTGATGACGGACATGTATCAGATTACGATGTCGTACGCGT
ACTGGAAAGCTGGGCGGCACAACGAGAATGCGGTGTTCGATCTGTTCTTC
CGCAAGTGTCCCTTCAAGGGCCAGTTCGCCATCTTCGCAGGTTTGAGCGA
GGTGATCGCACTGATGAACAGCTTCACCTTTACCCCCAGCGACATCGCCT
ACCTGCGGACGGTTCTCCCTCACTGCGAGGAGGCATTTTTCGACTGGCTC
GGGCAGCTCGACTGCCGAAACGTGCGCCTGTACGCTCTGGAGGAGGGCTC
GCTCTGCTTCCCCCGAATACCGCTCATTCGGGTTGAGGGTCCGCTAGCTG
TGGCGCAGCTTTTGGAAACCCCGTTGCTGAACCTCATCAACTACCCGTCG
CTCATTGCCACCAATGCGGCCAGGCTGCGGTTAGCGGCCGGGGCGGACAA
AACCCTTTTAGAGTTTGGACTGCGGCGGGCACAGGGTCCGGACGGAGCCC
TGTCCGCTTCTCGTTACTCGTACATCGGGGGGTTCAACGGCACCAGCAAC
GTTCTCGCGGGGAAGCTAATTGGCGTTGACATCCGAGGCACGCACGCCCA
CGCTTTCGTGCAATCCTACACTTCTTTCGAACAGATCAAGGATCCCACCC
TGGACGGCAAGGACTTCGTCGCGATCGTCAAGGGGTACCGTGACCGCCCG
GTCTGCGAAAAGGCCTCCGGGAGCAGCAACGACGGCGAGCTCGCGGCGTT
CACCGCGTACGCCCAGGCGTTCCCCGACGGCTTCGTCGCGCTCGTGGACA
CGTACGACACGCTCCAGTCCGGGGTACCCAACTTCCTGTGCGTGGCGCTG
GCACTGGATGACCTGGGGCACAGGGCGCTGGGGTGCCGGCTGGACTCCGG
GGACCTGAGCTACCTCAGCCAAGAGGTGCGAAAAATGACGACCGAGGCTG
CGAAGACCTTCAACCGCCCGTTCCTTGCCACCACAAACATCGTGGCCAGC
AACGACATCAACGAGGAGAGTCTGCACTACCTCGCTGACCAGGGCCACGC
CATCGACACCTTCGGCATCGGGACGAACCTAGTGACGTGCCAGGCGCAGC
CGGCCCTCGGCTGTGTGTACAAGCTGGTCTCCATCGAGGGTGTGCCCAGG
ATAAAGCTGTCGCAGACGACGTCAAAGATTACCATACCGGGCCGCAAGGC
GGTATACAGATTACTGGGCGCCGACAGAGTTCCCATCTTGGACATCATGC
TCAAAGACGGGGAGGAGCCGCCGCAGCCGGGAGTCCCCATACTCGCGAGA
CACCCGTTCGTGGCAACTATGCGCGCGAGGGTGACACCGACCCAGGTAGT
CCGATTGCAGGAGATGGTGTGGGATGGCCAAGCTGGAGGTGCAACCTCGG
ACATGCCCACCATCCACGAGGTGCGAGCGAAGGTGACAAAGGGGTTGAAA
GAGATTCGGCAGGACACGCTCCAGAGGCTCAACCCCACACCGTACAAGGT
GTCCGTGAGCGAAGGCCTGCACGACTTTCTGCACTCACTGTGGGAAAAGG
AGGCACCCATTAGGGAGCTCAGCTAA
back to top