prot_Ecto-sp13_S_contig90.20549.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig90.20549.1
Unique Nameprot_Ecto-sp13_S_contig90.20549.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1011
Homology
BLAST of mRNA_Ecto-sp13_S_contig90.20549.1 vs. uniprot
Match: D8LLE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE9_ECTSI)

HSP 1 Score: 734 bits (1894), Expect = 3.970e-255
Identity = 406/504 (80.56%), Postives = 420/504 (83.33%), Query Frame = 0
Query:  513 ILVSKQACESKPVGYEIDLAGGNGYWDLLGGNRGRGHDGDDDVLAGELAESAVASVVLLRWAMECIAANDGKGGAEDGDGVVPGTTAPRDGFTTADDDDPAKAPVGKDRTTSTQGEAVSATATGQVRLAHSARKPRDSNRFSFSGSLEERRASHHGEGDCRGPRKAIGNKSFAATCPSLSESSCNRERLRDKKPLPRELPLSGG------RXXXXXXXXXXXXXXXXPEGDRGRPAGGIVVTSPSPGDETNKDARHREGWRDGRTPTVAGKGTASGDEPAEDMRTVPKRWLAPAAHEVALHALVCLLRAAEVDLCGHSSTNRLPTELERDTVGGGRAVVMEESVLLLLLKACVKFQDHGDVVKICCMLMRVGVMCALHGAGFERPVGGPIAPDMALLVDNGVEGVVTRAAKAHVDNLSVAMEASALLHSLGMDSIRIDASGATCSALPPAPPTQPAAGKSDLGPASAVVTVDAVTKASTTALDLGVVHNPAAGQASSIIRRTEG 1010
            +L SK A ESKP GYEIDLA GNGYWDLLGGNRGRGH GDD VLAGELAESAVASVVLLRWAMEC+ ANDG+GGAEDGDGVVP TTAPRDG T ADD DPAKAPV +DRT   QGEAVSATA GQVRLA S RKPRDS+RFSFSGSLE + ASH GEGDCRGPR  IGNKSFAATCPSLSESSCNRERLRDKKPLPR LPLSGG       XXXXXXXX        PEGDRGRPA GIV TS SPGDE  KDAR REGWRD R                  MRTVPKRWLAPAAHEVALH LVCLLRAAEVDLCGH+ T+RL TEL+ DTVGGGRAVVMEE VLLL+LKAC KFQDHGDVVKICCMLMRVGVMCALHG GFERPVGGPIAPDM+LL+DN VEGVVTRAAKAHVDNLSVA EASALLHSLGMDSIRIDASGATCSALPPAPPT P AGKS LGPA+ VVTVDAVTK  TTALDLGVV NP AG+ASSII R EG
Sbjct:    1 MLASKPAFESKPAGYEIDLADGNGYWDLLGGNRGRGHGGDDGVLAGELAESAVASVVLLRWAMECVVANDGEGGAEDGDGVVPVTTAPRDGLT-ADDGDPAKAPVAEDRTPGMQGEAVSATAKGQVRLAKSTRKPRDSDRFSFSGSLETKLASHQGEGDCRGPRNVIGNKSFAATCPSLSESSCNRERLRDKKPLPRGLPLSGGGRXXXXXXXXXXXXXWKGEEQQPPEGDRGRPADGIVATSSSPGDEPKKDARRREGWRDARXXXXXXXXXXXXXXXXXXMRTVPKRWLAPAAHEVALHTLVCLLRAAEVDLCGHNGTHRLQTELDVDTVGGGRAVVMEEGVLLLILKACAKFQDHGDVVKICCMLMRVGVMCALHGEGFERPVGGPIAPDMSLLIDNDVEGVVTRAAKAHVDNLSVAAEASALLHSLGMDSIRIDASGATCSALPPAPPTPPPAGKSALGPAAVVVTVDAVTK--TTALDLGVVPNPTAGRASSIIGRAEG 501          
BLAST of mRNA_Ecto-sp13_S_contig90.20549.1 vs. uniprot
Match: A0A6H5KV03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV03_9PHAE)

HSP 1 Score: 730 bits (1885), Expect = 8.440e-253
Identity = 419/552 (75.91%), Postives = 435/552 (78.80%), Query Frame = 0
Query:  513 ILVSKQACESKPVGYEIDLAGGNGYWDLLGGNRGRGHDGDDDVLAGELAESAVASVVLLRWAMECIAANDGKGGAEDGDGVVPGTTAPRDGFTTADDDDPAKAPVGKDRTTSTQGEAVSATATGQVRLAHSARKPRDSNRFSFSGSLEERRASHHGEGDCRGPRKAIGNKSFAATCPSLSESSCNRERLRDKKPLPRELPLSGGRXXXXXXXXXXXXXXXX------PEGDRGRPAGGIVVTSPSPGDETNKDARHREGWRDGRTPTVAGKGTASGDEPAEDMRTVPKR--------------------------------------------------------------------------WLAPAAHEVALHALVCLLRAAEVDLCGHSSTNRLPTELERDTVGGGRAVVMEESVLLLLLKACVKFQDHGDVVKICCMLMRVGVMCALHGAGFERPVGGPIAPDMALLVDNGVEGVVTRAAKAHVDNLSVAMEASALLHSLGMDSIRIDASGATCSALPPAPPTQPAAGKSDLGPASAVVTVDAVTKAS 984
            +LVSKQACESK VGYE DLA GNGYWDLLG N  RGH  DD VLAGELAESAVASVVLLRWAMECI ANDG+GGAEDGDGVVPGTTAPR+G TTADDD+PAKAPV +D T S QG+AVSATATGQVRLAHSARKPR S+RFSFSGSLE + A+HHGEGDCRGPRKAIGNKSFAA+CPSLSESSCNRERLRDKKP PRELPLSGGRXXXXXXXXXXXXXXXX      PEGDRGRPAGGIVVTSPSPGDE  KD RHREGWRDGRTP VAGK TASGDEP EDMRT PKR                                                                          WLAPAAHEVALHALVCLLRAAEVDLCGHSSTNRL TEL+ DTVGGGRAVVMEE VLLL+LKAC +FQDHGDVVKICCMLMRVGVMCALHGAGFERPVGGPIAP MALLVDNGVEGVVTRAAKAHV+NLSV MEASALLHSLGM+SIRIDASGATCSALPPAPPT   AGKSDL PA+ VVTVDAVTKAS
Sbjct:    1 MLVSKQACESKSVGYEKDLADGNGYWDLLGENCCRGHGLDDGVLAGELAESAVASVVLLRWAMECIVANDGEGGAEDGDGVVPGTTAPRNGLTTADDDEPAKAPVAEDGTPSMQGKAVSATATGQVRLAHSARKPRGSDRFSFSGSLERKCANHHGEGDCRGPRKAIGNKSFAASCPSLSESSCNRERLRDKKPFPRELPLSGGRXXXXXXXXXXXXXXXXXXXXXXPEGDRGRPAGGIVVTSPSPGDEAKKDERHREGWRDGRTPRVAGKSTASGDEPVEDMRTFPKRYAAAPKMYCFWLVGAPSLLSAPWNDLHNPGSPQRRSTSRNVIFEERRMGLFKSVSSGLNPSCLPASLLSSADRTWLAPAAHEVALHALVCLLRAAEVDLCGHSSTNRLQTELDMDTVGGGRAVVMEEGVLLLVLKACARFQDHGDVVKICCMLMRVGVMCALHGAGFERPVGGPIAPGMALLVDNGVEGVVTRAAKAHVENLSVTMEASALLHSLGMNSIRIDASGATCSALPPAPPTPQPAGKSDLEPAAVVVTVDAVTKAS 552          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig90.20549.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLE9_ECTSI3.970e-25580.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KV03_9PHAE8.440e-25375.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..73
NoneNo IPR availableCOILSCoilCoilcoord: 138..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig90contigEcto-sp13_S_contig90:2004..11472 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig90.20549.1mRNA_Ecto-sp13_S_contig90.20549.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig90 2004..11472 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig90.20549.1 ID=prot_Ecto-sp13_S_contig90.20549.1|Name=mRNA_Ecto-sp13_S_contig90.20549.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1011bp
MARKRRKKGKRKPKPKLTTITDVVAKAVTSRKLMRLWNEALLSDEVKDLR
QRLAKAENDREALRKRAAEREDQQEAVFETLKERVVIAQSEIQTLVKRTQ
ENDERRRREHDDTQRNLQERIDEMYLQRLATASLQADLRDKEKTLDRFTS
ELQQAAIKNEELKREQKRLKNIEQMLDTFRRNFVVLGRTEAGEEIRHAVA
NAHGIQAGEDGETGGIDVMGEPIRLPPTGDVPGLGLVPLLIEGMAQFPGD
VKLTRDALALLGYIASLEQLGRTFLTTHRLYRQVVAALQRHVIDGVVALY
AARLLHKSALQGKATALDLRKAGVIPLLAEALATASFGPTGARKPRRLLY
HALATIRLCYPSGFFCKSLVALRLQHGCQPNPSQSGNKALLSPTRTAAAA
AAAAAAAITTAPCDDVQTVRDRTMSRRNGGRGGGGSDDCGSIKAEGGGEA
TRLKNASSTLLFRSPPPLHRYSLGVKACTRAPQLRPLPAAARENAYRRPG
KLPFSKRSHVGPILVSKQACESKPVGYEIDLAGGNGYWDLLGGNRGRGHD
GDDDVLAGELAESAVASVVLLRWAMECIAANDGKGGAEDGDGVVPGTTAP
RDGFTTADDDDPAKAPVGKDRTTSTQGEAVSATATGQVRLAHSARKPRDS
NRFSFSGSLEERRASHHGEGDCRGPRKAIGNKSFAATCPSLSESSCNRER
LRDKKPLPRELPLSGGRRGGGGGGGGVGEEQQPPEGDRGRPAGGIVVTSP
SPGDETNKDARHREGWRDGRTPTVAGKGTASGDEPAEDMRTVPKRWLAPA
AHEVALHALVCLLRAAEVDLCGHSSTNRLPTELERDTVGGGRAVVMEESV
LLLLLKACVKFQDHGDVVKICCMLMRVGVMCALHGAGFERPVGGPIAPDM
ALLVDNGVEGVVTRAAKAHVDNLSVAMEASALLHSLGMDSIRIDASGATC
SALPPAPPTQPAAGKSDLGPASAVVTVDAVTKASTTALDLGVVHNPAAGQ
ASSIIRRTEG*
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