prot_Ecto-sp13_S_contig9.20547.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig9.20547.1
Unique Name	prot_Ecto-sp13_S_contig9.20547.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	112

Homology

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BLAST of mRNA_Ecto-sp13_S_contig9.20547.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 9.420e-59
Identity = 100/125 (80.00%), Postives = 100/125 (80.00%), Query Frame = 0

Query:    1 MLSKNLYQQGGLVNGIRGEVVELVYADDAPPPKLPLCVVVKFE-------------RGCVPTSPVDATWQDGGTHVGTQLPLRLCWAIARHKSLGQTLAKAVIDFGPKEACTGLTFVCLSRAKRL 112
            MLSKNLYQQ GLVNGIRGEVVELV ADDAPPPKLPL VVVKFE             R CVP SPVD TWQDGGT V TQLPLRLCWAI  HKS GQTLAKAVID GPKEACTGLTFVCLSRAKRL
Sbjct:  110 MLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRL 234

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BLAST of mRNA_Ecto-sp13_S_contig9.20547.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 7.680e-57
Identity = 100/125 (80.00%), Postives = 100/125 (80.00%), Query Frame = 0

Query:    1 MLSKNLYQQGGLVNGIRGEVVELVYADDAPPPKLPLCVVVKFE-------------RGCVPTSPVDATWQDGGTHVGTQLPLRLCWAIARHKSLGQTLAKAVIDFGPKEACTGLTFVCLSRAKRL 112
            MLSKNLYQQ GLVNGIRGEVVELV ADDAPPPKLPL VVVKFE             R CVP SPVD TWQDGGT V TQLPLRLCWAI  HKS GQTLAKAVID GPKEACTGLTFVCLSRAKRL
Sbjct:  284 MLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRL 408

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BLAST of mRNA_Ecto-sp13_S_contig9.20547.1 vs. uniprot
Match: A0A6H5K4U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U7_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 1.150e-56
Identity = 100/125 (80.00%), Postives = 100/125 (80.00%), Query Frame = 0

Query:    1 MLSKNLYQQGGLVNGIRGEVVELVYADDAPPPKLPLCVVVKFE-------------RGCVPTSPVDATWQDGGTHVGTQLPLRLCWAIARHKSLGQTLAKAVIDFGPKEACTGLTFVCLSRAKRL 112
            MLSKNLYQQ GLVNGIRGEVVELV ADDAPPPKLPL VVVKFE             R CVP SPVD TWQDGGT V TQLPLRLCWAI  HKS GQTLAKAVID GPKEACTGLTFVCLSRAKRL
Sbjct:    1 MLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRL 125

[Close]

BLAST of mRNA_Ecto-sp13_S_contig9.20547.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 3.600e-54
Identity = 100/125 (80.00%), Postives = 100/125 (80.00%), Query Frame = 0

Query:    1 MLSKNLYQQGGLVNGIRGEVVELVYADDAPPPKLPLCVVVKFE-------------RGCVPTSPVDATWQDGGTHVGTQLPLRLCWAIARHKSLGQTLAKAVIDFGPKEACTGLTFVCLSRAKRL 112
            MLSKNLYQQ GLVNGIRGEVVELV ADDAPPPKLPL VVVKFE             R CVP SPVD TWQDGGT V TQLPLRLCWAI  HKS GQTLAKAVID GPKEACTGLTFVCLSRAKRL
Sbjct: 1415 MLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRL 1539

[Close]

BLAST of mRNA_Ecto-sp13_S_contig9.20547.1 vs. uniprot
Match: A0A6H5K214_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K214_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.940e-27
Identity = 51/57 (89.47%), Postives = 51/57 (89.47%), Query Frame = 0

Query:   56 WQDGGTHVGTQLPLRLCWAIARHKSLGQTLAKAVIDFGPKEACTGLTFVCLSRAKRL 112
            WQDGGT V TQLPLRLCWAI  HKS GQTLAKAVID GPKEACTGLTFVCLSRAKRL
Sbjct:    2 WQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRL 58

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BLAST of mRNA_Ecto-sp13_S_contig9.20547.1 vs. uniprot
Match: A0A6H5KSF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF1_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 2.330e-26
Identity = 49/56 (87.50%), Postives = 50/56 (89.29%), Query Frame = 0

Query:   57 QDGGTHVGTQLPLRLCWAIARHKSLGQTLAKAVIDFGPKEACTGLTFVCLSRAKRL 112
            +DGGT V TQLPLRLCWAI  HKS GQTLAKAVID GPKEACTGLTFVCLSRAKRL
Sbjct:    8 EDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRL 63

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BLAST of mRNA_Ecto-sp13_S_contig9.20547.1 vs. uniprot
Match: A0A6H5KFN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN2_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 5.840e-26
Identity = 49/56 (87.50%), Postives = 50/56 (89.29%), Query Frame = 0

Query:   57 QDGGTHVGTQLPLRLCWAIARHKSLGQTLAKAVIDFGPKEACTGLTFVCLSRAKRL 112
            +DGGT V TQLPLRLCWAI  HKS GQTLAKAVID GPKEACTGLTFVCLSRAKRL
Sbjct:    6 EDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRL 61

[Close]

BLAST of mRNA_Ecto-sp13_S_contig9.20547.1 vs. uniprot
Match: A0A6H5KCP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP5_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 1.250e-25
Identity = 49/56 (87.50%), Postives = 50/56 (89.29%), Query Frame = 0

Query:   57 QDGGTHVGTQLPLRLCWAIARHKSLGQTLAKAVIDFGPKEACTGLTFVCLSRAKRL 112
            +DGGT V TQLPLRLCWAI  HKS GQTLAKAVID GPKEACTGLTFVCLSRAKRL
Sbjct:    6 EDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRL 61

[Close]

BLAST of mRNA_Ecto-sp13_S_contig9.20547.1 vs. uniprot
Match: A0A6H5JMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH2_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 1.820e-25
Identity = 49/56 (87.50%), Postives = 50/56 (89.29%), Query Frame = 0

Query:   57 QDGGTHVGTQLPLRLCWAIARHKSLGQTLAKAVIDFGPKEACTGLTFVCLSRAKRL 112
            +DGGT V TQLPLRLCWAI  HKS GQTLAKAVID GPKEACTGLTFVCLSRAKRL
Sbjct:   72 KDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRL 127

[Close]

BLAST of mRNA_Ecto-sp13_S_contig9.20547.1 vs. uniprot
Match: A0A6H5KN08_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN08_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 1.630e-24
Identity = 49/56 (87.50%), Postives = 50/56 (89.29%), Query Frame = 0

Query:   57 QDGGTHVGTQLPLRLCWAIARHKSLGQTLAKAVIDFGPKEACTGLTFVCLSRAKRL 112
            +DGGT V TQLPLRLCWAI  HKS GQTLAKAVID GPKEACTGLTFVCLSRAKRL
Sbjct:    6 EDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRL 61

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig9.20547.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig9.20547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JUS2_9PHAE	9.420e-59	80.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JFG8_9PHAE	7.680e-57	80.00	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K4U7_9PHAE	1.150e-56	80.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L976_9PHAE	3.600e-54	80.00	ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ...	[more]
A0A6H5K214_9PHAE	1.940e-27	89.47	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KSF1_9PHAE	2.330e-26	87.50	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KFN2_9PHAE	5.840e-26	87.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCP5_9PHAE	1.250e-25	87.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JMH2_9PHAE	1.820e-25	87.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KN08_9PHAE	1.630e-24	87.50	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23274:SF11	ATP-DEPENDENT DNA HELICASE PIF1	coord: 1..112
None	No IPR available	PANTHER	PTHR23274	DNA HELICASE-RELATED	coord: 1..112
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..111

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig9	contig	Ecto-sp13_S_contig9:14923..15297 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig9.20547.1	mRNA_Ecto-sp13_S_contig9.20547.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig9 14116..15297 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig9.20547.1 ID=prot_Ecto-sp13_S_contig9.20547.1|Name=mRNA_Ecto-sp13_S_contig9.20547.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=112bp
MLSKNLYQQGGLVNGIRGEVVELVYADDAPPPKLPLCVVVKFERGCVPTS
PVDATWQDGGTHVGTQLPLRLCWAIARHKSLGQTLAKAVIDFGPKEACTG
LTFVCLSRAKRL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase