prot_Ecto-sp13_S_contig8930.20458.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8930.20458.1
Unique Nameprot_Ecto-sp13_S_contig8930.20458.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length534
Homology
BLAST of mRNA_Ecto-sp13_S_contig8930.20458.1 vs. uniprot
Match: A0A6H5KPG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPG0_9PHAE)

HSP 1 Score: 553 bits (1424), Expect = 1.050e-189
Identity = 452/584 (77.40%), Postives = 461/584 (78.94%), Query Frame = 0
Query:    1 SSRLHQSGSSSVEKTGGLKIANFRSSRHVSSSSKHRVDDDVSRQATARVRAVSVTRGRHTPPQAAAGGDKGEHGAIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNDGEEHARSRNISAVSTAGEAQAAPGAATAVVAADRQRASRQQQRQGSAPLRTSSGLKNPSRVLENRGRRASGNVAMISAGASTAACSTAAAA----------GRTEGISMHSDDGGTGRYRRVVTRRSSDTARPAVDLGQKEQAWKRERAQLLTVIKLQHRQLMMRPSSSSSCSWADASPSGDSVGTTSXXXXXXXXXXXXXXRSSPCVSSVTPPPLQPRQRHRPSRPWQSLTPPSATREAPIITSRPP--------------------------------------PRTHLLGKVELQREKAAARGVGRLQEGRGRGLASAGSVKSRSDSGSSWADSSAVAGPAAAPRGFPVESEDGRGXXXXXXXXXXXXXXXXXX---NDVTVSPSRRCCVEGRLEVMERNVTAVLRRLDDLEMRKSKRGNDDRSVQSTRSDRHVHAV 533
            SSRL Q GSSSVEKTGGLKIANFRSSR VSSSSKHRV DDVSRQATA+VRA S+TRGR TPP+A             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXX         ARSRN SAVSTAG  QAAPGAATAVVAA+RQRASRQ QRQGSA L  SSG KNPSRVLENRGRRAS +V M+SAGASTAAC                GRTEGISMHSDDGG GRYRRVV RRSSDTARPAVDLGQKEQAWKRERAQLLTVIKLQHRQLMMRPSSSSSCSWAD SPSGDSVGT SXXXXXXXXXXXXXXRSSP VSSVTPPPLQ RQRHRPSRP QSLTPP ATREAPIITSRPP                                       RTHLLG+VELQREKAAARGVGRLQ GRGRGLASAGSVKSRSDSGSS  DS AVAGP AAPRGFP ESED R XXXXXXXXXXXXXXXXXX   N  TVSPSRRCCVEGRLEVMERNV AVLRRLD+LE RKSK GNDDRSVQSTRSDRHVHA+
Sbjct:   19 SSRLQQPGSSSVEKTGGLKIANFRSSRRVSSSSKHRVGDDVSRQATAQVRAASITRGRRTPPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSAPTKXXXXXXXXXXXXXXXXXXXXXXXS--------ARSRNNSAVSTAGVGQAAPGAATAVVAAERQRASRQHQRQGSAHLHMSSGRKNPSRVLENRGRRASRSVTMVSAGASTAACXXXXXXXXXXXXXXXXGRTEGISMHSDDGGAGRYRRVVMRRSSDTARPAVDLGQKEQAWKRERAQLLTVIKLQHRQLMMRPSSSSSCSWADGSPSGDSVGTASXXXXXXXXXXXXXXRSSPYVSSVTPPPLQSRQRHRPSRPSQSLTPPPATREAPIITSRPPRLANDYDEEDSDSTPRAGARPAGXXXXXTAAPVLLSRSERTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVKSRSDSGSSCPDSPAVAGPMAAPRGFPAESEDRRXXXXXXXXXXXXXXXXXXXXXXNAETVSPSRRCCVEGRLEVMERNVKAVLRRLDELEKRKSKGGNDDRSVQSTRSDRHVHAI 594          
BLAST of mRNA_Ecto-sp13_S_contig8930.20458.1 vs. uniprot
Match: D7FU32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU32_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 3.130e-79
Identity = 188/325 (57.85%), Postives = 191/325 (58.77%), Query Frame = 0
Query:  219 MISAGASTAACSTAAA----------AGRTEGISMHSDDGGTGRYRRVVTRRSSDTARPAVDLGQKEQAWKRERAQLLTVIKLQHRQLMMRPSSSSSCSWADASPSGDSVGTTSXXXXXXXXXXXXXXRSSPCVSSVTPPPLQPRQRHRPSRPWQSLTPPSATREAPIITSRPPPRTHLLGKVELQREKAAARGVGRLQEGRGRGLASAGSVKSRSDSGSSWADSSAVAGPAAAPRGFPVESEDGRGXXXXXXXXXXXXXXXXXXNDVTVSPSRRCCVEGRLEVMERNVTAVLRRLDDLEMRKSKRGNDDRSVQSTRSDRHVHAV 533
            M+SAGASTAAC  A            AG TEGISMHSDDGG GRYRRVVTRRSSDTARPAVDLGQKEQAWKR                                                                                                       RTHLLG+VELQREKAAARGVGRLQ GRGRGLASAGSVKSRSDSGSS  DSSAVAGP AAPRGFP ESEDGR      XXXXXXXXXXXXXN VTVSPSRRCCVEGRLEVMERNVTAVLRRLD+LE RKSK GNDDRSV STRSDRHVHAV
Sbjct:    1 MVSAGASTAACPAAGTXXXXXXXXXXAGWTEGISMHSDDGGAGRYRRVVTRRSSDTARPAVDLGQKEQAWKRSE-----------------------------------------------------------------------------------------------------RTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVKSRSDSGSSCPDSSAVAGPTAAPRGFPAESEDGR---RGGXXXXXXXXXXXXXNAVTVSPSRRCCVEGRLEVMERNVTAVLRRLDELEKRKSKGGNDDRSVHSTRSDRHVHAV 221          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8930.20458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KPG0_9PHAE1.050e-18977.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU32_ECTSI3.130e-7957.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 490..510

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8930contigEcto-sp13_S_contig8930:294..3065 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8930.20458.1mRNA_Ecto-sp13_S_contig8930.20458.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8930 294..3065 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8930.20458.1 ID=prot_Ecto-sp13_S_contig8930.20458.1|Name=mRNA_Ecto-sp13_S_contig8930.20458.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=534bp
SSRLHQSGSSSVEKTGGLKIANFRSSRHVSSSSKHRVDDDVSRQATARVR
AVSVTRGRHTPPQAAAGGDKGEHGAIEETATTVMTKKTSAAAAAAAAAAA
AAAAAAADPPLVLRRAVSAPTKSRAGSSSSSSSSSCGGGGDGNDGEEHAR
SRNISAVSTAGEAQAAPGAATAVVAADRQRASRQQQRQGSAPLRTSSGLK
NPSRVLENRGRRASGNVAMISAGASTAACSTAAAAGRTEGISMHSDDGGT
GRYRRVVTRRSSDTARPAVDLGQKEQAWKRERAQLLTVIKLQHRQLMMRP
SSSSSCSWADASPSGDSVGTTSTAATTAPPAEPATPRSSPCVSSVTPPPL
QPRQRHRPSRPWQSLTPPSATREAPIITSRPPPRTHLLGKVELQREKAAA
RGVGRLQEGRGRGLASAGSVKSRSDSGSSWADSSAVAGPAAAPRGFPVES
EDGRGGGGSCCNDSGYGGGGGGGNDVTVSPSRRCCVEGRLEVMERNVTAV
LRRLDDLEMRKSKRGNDDRSVQSTRSDRHVHAV*
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