prot_Ecto-sp13_S_contig8920.20450.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8920.20450.1
Unique Nameprot_Ecto-sp13_S_contig8920.20450.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length115
Homology
BLAST of mRNA_Ecto-sp13_S_contig8920.20450.1 vs. uniprot
Match: A0A6H5KM83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM83_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 1.510e-79
Identity = 109/114 (95.61%), Postives = 112/114 (98.25%), Query Frame = 0
Query:    1 MIDVVFGTPKKEGDPLPILMRWEICPTLITPGLVAKPSLAVWHETAPCFLDGVVTTVTKIAVHGRIPLEWAWPNPRAGRLPTARRPLPHLQWAIKLSRVQPVDRGIILFNACCR 114
            M+DVVFGTPKKEGDPLPILMRWEICPTLITPGLVAKPSLAVWHETAPCFLDGVVTTVTKIA+HGRIPLEWAWPNPRAGRLPTARRPLPHLQWAIKL  VQPV+RGIILFNACCR
Sbjct:    1 MMDVVFGTPKKEGDPLPILMRWEICPTLITPGLVAKPSLAVWHETAPCFLDGVVTTVTKIAIHGRIPLEWAWPNPRAGRLPTARRPLPHLQWAIKLPGVQPVERGIILFNACCR 114          
BLAST of mRNA_Ecto-sp13_S_contig8920.20450.1 vs. uniprot
Match: A0A6H5JXU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU8_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 3.990e-70
Identity = 97/114 (85.09%), Postives = 106/114 (92.98%), Query Frame = 0
Query:    1 MIDVVFGTPKKEGDPLPILMRWEICPTLITPGLVAKPSLAVWHETAPCFLDGVVTTVTKIAVHGRIPLEWAWPNPRAGRLPTARRPLPHLQWAIKLSRVQPVDRGIILFNACCR 114
            M+DVVFGTPKKEGDPLPIL+RWE CPT  TPG+V++P+LAVWHETAPCFLDGV+TTVTKIA+ GRIPLEWAWPNPRAGRLPTARRPLPHLQWAIKL  VQPV R I+LFNACCR
Sbjct:   62 MMDVVFGTPKKEGDPLPILLRWEFCPTQNTPGVVSEPTLAVWHETAPCFLDGVMTTVTKIAIRGRIPLEWAWPNPRAGRLPTARRPLPHLQWAIKLPGVQPVKRRIMLFNACCR 175          
BLAST of mRNA_Ecto-sp13_S_contig8920.20450.1 vs. uniprot
Match: D7G025_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G025_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 3.220e-62
Identity = 93/113 (82.30%), Postives = 98/113 (86.73%), Query Frame = 0
Query:    1 MIDVVFGTPKKEGDPLPILMRWEICPTLITPGLVAKPSLAVWHETAPCFLDGVVTTVTKIAVHGRIPLEWAWPNPRAGRLPTARRPLPHLQWAIKLSRVQPVDRGIILFNACC 113
            M+DVVFGT KK G PLPILMRW+ CPTLITPGLVAKPSLAVWHETAPCFL GVVTTVTKIA+HGRIPLEWAWPNPR   LPTARRP  HLQWAIK  RVQPV R ++LFNA C
Sbjct:   62 MMDVVFGTAKK-GKPLPILMRWDFCPTLITPGLVAKPSLAVWHETAPCFLTGVVTTVTKIAIHGRIPLEWAWPNPRTLTLPTARRPRTHLQWAIKSPRVQPVKRRMMLFNAWC 173          
BLAST of mRNA_Ecto-sp13_S_contig8920.20450.1 vs. uniprot
Match: A0A6H5L242_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L242_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 9.660e-47
Identity = 77/115 (66.96%), Postives = 89/115 (77.39%), Query Frame = 0
Query:    1 MIDVVFGTPKKEGDPLPILMRWEICPTLITPGLVAKPSLAVWHETAPCFLDGVVTTVTKIAVHGRIPLEWAW-PNPRAGRLPTARRPLPHLQWAIKLSRVQPVDRGIILFNACCR 114
            M+D+VFGT KK G+PLPIL+RW+ CPTLI PGLVAKPSLAVWHETAPCFLDG+V+TVTKIA+HGR PL+      P  G    +    P+LQ AIKL  VQPV R I+LFNACCR
Sbjct:   46 MVDIVFGTAKK-GEPLPILLRWDFCPTLIAPGLVAKPSLAVWHETAPCFLDGIVSTVTKIAIHGRNPLDRVGLAKPSGGATTHSTTAPPNLQCAIKLPGVQPVKRRIMLFNACCR 159          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8920.20450.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KM83_9PHAE1.510e-7995.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXU8_9PHAE3.990e-7085.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G025_ECTSI3.220e-6282.30Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5L242_9PHAE9.660e-4766.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8920contigEcto-sp13_S_contig8920:1619..1963 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8920.20450.1mRNA_Ecto-sp13_S_contig8920.20450.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8920 1619..2174 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8920.20450.1 ID=prot_Ecto-sp13_S_contig8920.20450.1|Name=mRNA_Ecto-sp13_S_contig8920.20450.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=115bp
MIDVVFGTPKKEGDPLPILMRWEICPTLITPGLVAKPSLAVWHETAPCFL
DGVVTTVTKIAVHGRIPLEWAWPNPRAGRLPTARRPLPHLQWAIKLSRVQ
PVDRGIILFNACCR*
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