mRNA_Ecto-sp13_S_contig892.20449.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig892.20449.1 vs. uniprot
Match: D7FU71_ECTSI (GT23 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU71_ECTSI) HSP 1 Score: 260 bits (664), Expect = 7.250e-82 Identity = 128/174 (73.56%), Postives = 153/174 (87.93%), Query Frame = 3
Query: 600 QDLGNFLIANYKETQRPNLPRPTPRARLHDETETAAALLGYVYSNMQPWFKEDTDSILRENDVASVRSGRYVAIHVRRGDKL-IKEASRTEVQVYLEAAASTLRNSTEGVDGPNSIVGLWVSSDDSNVVPEVKELASRYFPNVQDERVVSISFRTKAPAQHGNNDELPTTSHLM 1118
+D+G FL+ANY+E+QR N+P+P+PR +LHDETETAAALLGYVYSNMQPWFKEDTD++L ++DV SVRS RYVAIHVRRGDK+ ++EASRTEV+VYL+AAAS L+NST VDGPNSI GLWVSSDD +V+PEVK LAS YF NVQD+RVVSI+FR + AQ GN D+LPTTSH M
Sbjct: 11 EDVGKFLMANYEESQRINVPQPSPRTQLHDETETAAALLGYVYSNMQPWFKEDTDAMLLQSDVHSVRSVRYVAIHVRRGDKVTLQEASRTEVEVYLQAAASILQNSTGSVDGPNSIGGLWVSSDDPSVLPEVKALASTYFANVQDDRVVSITFRAEGLAQDGNKDQLPTTSHRM 184
BLAST of mRNA_Ecto-sp13_S_contig892.20449.1 vs. uniprot
Match: A0A6H5JIU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIU1_9PHAE) HSP 1 Score: 141 bits (356), Expect = 2.050e-37 Identity = 69/94 (73.40%), Postives = 83/94 (88.30%), Query Frame = 3
Query: 600 QDLGNFLIANYKETQRPNLPRPTPRARLHDETETAAALLGYVYSNMQPWFKEDTDSILRENDVASVRSGRYVAIHVRRGDKL-IKEASRTEVQV 878
+DLG FL+ANY+E+QR +P+ + R +LHDETETAAALLGYVYSNMQPWFKEDT+ +L ++DV SVRS RYVAIHVRRGDKL +KEASRTEV+V
Sbjct: 11 EDLGKFLMANYEESQRIEVPQRSSRTQLHDETETAAALLGYVYSNMQPWFKEDTERMLLQSDVDSVRSARYVAIHVRRGDKLTLKEASRTEVEV 104
BLAST of mRNA_Ecto-sp13_S_contig892.20449.1 vs. uniprot
Match: D7G435_ECTSI (Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G435_ECTSI) HSP 1 Score: 118 bits (295), Expect = 2.230e-25 Identity = 79/217 (36.41%), Postives = 117/217 (53.92%), Query Frame = 3
Query: 687 DETETAAALLGYVYSNMQPWFKEDTDSILRENDVASVRSGRYVAIHVRRGDKLI--KEASRTEVQVYLEAAASTLRNSTEGVDGPNS---IVGLWVSSDDSNVVPEVKELASRYFPNVQDERVVSISFRTKAPAQHGNNDELPTTSHLMTYELYVGLHAELHMMSHADVFIGTYSSNIGRLVYLFREVNGLP-RYSTHSVDDPTWHFGRREL-AMDG 1316
D AA+ Y++SN+ PW + D D + R + + ++ +H+RRGDK+ + AS + YLEAA L EG D S I G+WV+SD+ V+ +VK++A Y PNV ++ + S + + G T + TY +V A+L ++ AD+F+GT+SSN+GRL+ L RE GL R S S+D P W GRR AM G
Sbjct: 245 DHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVTHGRRASMYLCKEYLEAAVEFL----EGDDSQLSVGDIKGIWVASDEPKVIAKVKQIAPDYLPNVSEDDIFWASGGVEGGPEIGRT---ATRTDKETYADFVYTLADLQQLTAADLFVGTFSSNMGRLLVLLRESIGLKDRASAVSIDGP-WRAGRRRRRAMRG 453
BLAST of mRNA_Ecto-sp13_S_contig892.20449.1 vs. uniprot
Match: A0A6H5JTL0_9PHAE (GT23 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL0_9PHAE) HSP 1 Score: 117 bits (294), Expect = 2.790e-25 Identity = 81/218 (37.16%), Postives = 117/218 (53.67%), Query Frame = 3
Query: 687 DETETAAALLGYVYSNMQPWFKEDTDSILRENDVASVRSGRYVAIHVRRGDKLIK-EASRTEVQVYLEAAASTLRNSTEGVDGPNS---IVGLWVSSDDSNVVPEVKELASRYFPNVQDERVVSISFRTKAPAQHGNNDELPTT-SHLMTYELYVGLHAELHMMSHADVFIGTYSSNIGRLVYLFREVNGLP-RYSTHSVDDPTWHFGRREL-AMDGS 1319
D AA+ Y++SN+ PW + D D + R + + ++ +H+RRGDK+ + EAS + YLE A L EG D S I G+WV+SD+ V+ +VK++A Y PNV + + F + G E T + TY +V A+L ++ AD+F+GT+SSNIGRL+ L RE GL R S S+D P W GRR AM G+
Sbjct: 238 DHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVSQGEASMYLCEEYLETAVEFL----EGNDSQLSVGDIKGIWVASDEPKVIAKVKQIAQDYLPNVSEGDI----FWASGGVEGGPEIERTATRTDQETYADFVYTFADLQQLTAADLFVGTFSSNIGRLLVLLRESIGLKDRASAVSIDGP-WRAGRRRRRAMRGA 446
BLAST of mRNA_Ecto-sp13_S_contig892.20449.1 vs. uniprot
Match: A0A6H5LR29_9PHAE (GT23 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LR29_9PHAE) HSP 1 Score: 114 bits (286), Expect = 2.960e-25 Identity = 73/196 (37.24%), Postives = 108/196 (55.10%), Query Frame = 3
Query: 690 ETETAAALLGYVYSNMQPWFKEDTDSILRENDVASVRSGRYVAIHVRRGDKLIK-EASRTEVQVYLEAAASTLRNSTEGVDGPNSIVGLWVSSDDSNVVPEVKELASRYFPNVQDERVVSISFRTKAPAQHGNNDELPTTSHLMTYELYVGLHAELHMMSHADVFIGTYSSNIGRLVYLFRE-VNGLPRYSTHSVD 1271
+T+ A LL + N+ PW +ED L D+ R +V +HVRRGDK+ + EA + E + YL AAA N I +WV+SDD VV EV+ +A +YFPNV DE +V +S + A + T + Y+ +V + A+L M++ +F+GTY+SN+ RLV L RE ++G R S S+D
Sbjct: 101 DTQVMARLL---WKNLTPWLQEDVRKALERPDLDVFRRKPFVGLHVRRGDKVGEGEAQKVETKEYLSAAARFFDNKAS--QDKQDIEAIWVASDDHKVVEEVRAIARQYFPNVLDEDIVWVSGGARGGA-------VTTHTKSQGYQGFVMVFADLKMLAAGSLFVGTYTSNVSRLVALLREGIHGHARDSCISLD 284
BLAST of mRNA_Ecto-sp13_S_contig892.20449.1 vs. uniprot
Match: D8LU01_ECTSI (GT23 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU01_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 3.680e-13 Identity = 55/156 (35.26%), Postives = 81/156 (51.92%), Query Frame = 3
Query: 531 QALLVHLPTYDASPRTRPLCNDLQDLGNFLIANYKETQR--PNLPRPTPRARLHDETETAAALLGYVYSNMQPWFKEDTDSILRENDVASVRSGRYVAIHVRRGDKLIKEASRTEVQVYLEAAASTLRNSTEGVDGPNSIVGLWVSSDDSNVVPEV 992
Q L V + T + PRT +CN + +Y E R P P D + L+ +++S +QPWFK D IL E D+A +R+G+YV +H+RR DK E T+ +VY A LR+S G+ + I GLW+S+D+ +V EV
Sbjct: 90 QDLAVVVRTDEWFPRT--ICN---------VTSYGEETRGWPCFFAEVPHLCAFDADQM---LVDHLHSYLQPWFKADIQRILDEPDIAEMRNGKYVGMHIRRTDKA-NETKLTKTEVYFRKVAQYLRSSPGGLRAAD-ITGLWLSTDEVSVFNEV 229
BLAST of mRNA_Ecto-sp13_S_contig892.20449.1 vs. uniprot
Match: R7QMX9_CHOCR (Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMX9_CHOCR) HSP 1 Score: 61.6 bits (148), Expect = 2.490e-7 Identity = 61/179 (34.08%), Postives = 90/179 (50.28%), Query Frame = 3
Query: 801 SGRYVAIHVRRGDKLIKEASRTEVQVYLEAAASTLRNSTEGVDGPNSIVGLWVSSDDSNVVPEVKELASRYFPNVQDERVVSISFRTKAPAQHGNNDELPTTSHLM--TYELYVGLHAELHMMSHADVFIGTYSSNIGRLVYLFREVNGLPRYSTHSVDDP-----TWH-FGRRELAMD 1313
+G YV +HVRRGDK KE + +V ++ AAA V G + ++V++DD V +++L + +VV+I + G +D+L T M Y V L AE+ + A VF+GT+SSN+GRLV++ RE G R S S+DD W FG R M+
Sbjct: 38 AGEYVGVHVRRGDKS-KEVA--DVPLWRYAAA------VRAVSGEE--MAVFVAADDGASVRGLRQLLA-------GRKVVAI----RGAEGRGGHDQLATNRGYMKENYGRVVELLAEVEALRGAKVFVGTFSSNLGRLVHVLRE--GDERNSV-SLDDRWAPGVAWRTFGERYCEME 191
BLAST of mRNA_Ecto-sp13_S_contig892.20449.1 vs. uniprot
Match: UPI00054FC0E2 (hypothetical protein n=1 Tax=Dokdonia sp. PRO95 TaxID=1239415 RepID=UPI00054FC0E2) HSP 1 Score: 60.5 bits (145), Expect = 1.810e-6 Identity = 53/154 (34.42%), Postives = 80/154 (51.95%), Query Frame = 3
Query: 807 RYVAIHVRRGDKLIKEASRTEVQVYLEAAASTLRNSTEGVDGPNSIVGLWVSSDDSNVVPEVKELASRYFPNVQDERVVSISFRTKAPAQHGNNDELPTTSHLMTYELYV-GLHAELHMMSHADVFIGTYSSNIGRLVYLFREVNGLPRYSTHS 1265
R+ IHVRRGDKLI+EA V+ YLE + + +G D + L+V+SD+ V+ E++ S + IS+ P+ +G++ + + E V L E+ ++S F+GT+SSNIGRLV+L R N L YS S
Sbjct: 172 RFSGIHVRRGDKLIREAGLFIVKCYLE------KGNEKGFD----MHDLFVASDNFQVLEELENYNSY---------IEYISYCE--PSDNGHHQKSFNNQTMSNIESQVLRLLIEIEILSLTKCFVGTFSSNIGRLVHLKR--NTLNSYSLDS 302
BLAST of mRNA_Ecto-sp13_S_contig892.20449.1 vs. uniprot
Match: A0A7S0BFM2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BFM2_9RHOD) HSP 1 Score: 57.0 bits (136), Expect = 1.200e-5 Identity = 49/207 (23.67%), Postives = 94/207 (45.41%), Query Frame = 3
Query: 723 VYSNMQPWFKEDTDSILRENDVA---SVRSGRYVAIHVRRGDKLIKEASRTEVQVYLEAAASTLRNSTEGVDGPNSIVGLWVSSDDSNVVPEVKELASRYFPNVQDERVVSISFRTKAPAQHGNNDELPTTSHLMTYELYVGLHAELHMMSHADVFIGTYSSNIGRLVYLFREVNGLPRYSTHSVDDPTWHFGRRELAMDGSFAAGF 1334
+ NM+ +K + + R ND +R +V +H+RRGDK ++ + LE+ A +R S + +++++DD +++ E+++L Y + + + N +E P +++ + L AE+ ++ A FIGTYSSNIGRL+ + R+ + T D W G + + + G+
Sbjct: 20 IKKNMKHVWKPNRNIQERTNDAMRRIDLRPDEFVGLHIRRGDKALEVPL-----IPLESYAEIVRMSDPAISK------IFLATDDGSIIWELRDLLPEY-------AIYTFADPQSTGHLQRNANEDPMRQTVLST---MSLVAEIDILRQAKYFIGTYSSNIGRLLAVLRDKD----IRTSISMDVAWSSGVAWRSFNSDYCMGY 201
BLAST of mRNA_Ecto-sp13_S_contig892.20449.1 vs. uniprot
Match: A0A1Q3M4W3_9BACT (Uncharacterized protein n=1 Tax=Bacteroidales bacterium 45-6 TaxID=1895719 RepID=A0A1Q3M4W3_9BACT) HSP 1 Score: 57.8 bits (138), Expect = 1.390e-5 Identity = 50/189 (26.46%), Postives = 90/189 (47.62%), Query Frame = 3
Query: 687 DETETAAALLGYVYSNMQPWF--KEDTDSILRENDVASVRSGRYVAIHVRRGDKLI-KEASRTEVQVYLEAAASTLRNSTEGVDGPNSIVGLWVSSDDSNVVP------EVKELASRYFPNVQDERVVSISFRTKAPAQHGNNDELPTTSHLMTYELYVGLHAELHMMSHADVFIGTYSSNIGRLVYLF 1226
D T+ + + YV N + +F + I++ N Y+ +HVRRGDK+ KE + E++ Y++ S L+ S G ++V++DD NV+ E+ L+ + N+ + V F K+ D+ T++L+T ++ ++ + FIGTYSSN+ R++ LF
Sbjct: 125 DLTKESQYKIKYV-ENFRSFFYLNNKVEQIVQRNKEQFDLPKEYIGVHVRRGDKITTKEMGKIEMETYVD---SILQKS-----GELKCKNIYVATDDVNVISFLSTSHELTSLSLYWNKNISQDGFVEYDFNRKSKV-----DKFIETTNLLT---------DIIILKESIFFIGTYSSNLSRVIPLF 290 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig892.20449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig892.20449.1 >prot_Ecto-sp13_S_contig892.20449.1 ID=prot_Ecto-sp13_S_contig892.20449.1|Name=mRNA_Ecto-sp13_S_contig892.20449.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=293bp MGSTTGRCRTWYDQSSSLSKPRPSQALLVHLPTYDASPRTRPLCNDLQDLback to top mRNA from alignment at Ecto-sp13_S_contig892:6584..10059- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig892.20449.1 ID=mRNA_Ecto-sp13_S_contig892.20449.1|Name=mRNA_Ecto-sp13_S_contig892.20449.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3476bp|location=Sequence derived from alignment at Ecto-sp13_S_contig892:6584..10059- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig892:6584..10059- >mRNA_Ecto-sp13_S_contig892.20449.1 ID=mRNA_Ecto-sp13_S_contig892.20449.1|Name=mRNA_Ecto-sp13_S_contig892.20449.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=879bp|location=Sequence derived from alignment at Ecto-sp13_S_contig892:6584..10059- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |