prot_Ecto-sp13_S_contig89167.20446.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig89167.20446.1
Unique Nameprot_Ecto-sp13_S_contig89167.20446.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length59
Homology
BLAST of mRNA_Ecto-sp13_S_contig89167.20446.1 vs. uniprot
Match: D7FVH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH9_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 3.610e-28
Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    1 MRCSKKGLVAPGSSEVITVDFHPREHRYHYDCLRLHTDSENLLVPLHAYPVSGEV 55
            MRC+KKGLVAPGSSEVITVDFHPREHRYHYDCLRLHTDSENLLVPLHAYPV  +V
Sbjct:  160 MRCNKKGLVAPGSSEVITVDFHPREHRYHYDCLRLHTDSENLLVPLHAYPVMNDV 214          
BLAST of mRNA_Ecto-sp13_S_contig89167.20446.1 vs. uniprot
Match: A0A7S3YIG3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIG3_HETAK)

HSP 1 Score: 82.0 bits (201), Expect = 7.650e-18
Identity = 30/55 (54.55%), Postives = 47/55 (85.45%), Query Frame = 0
Query:    1 MRCSKKGLVAPGSSEVITVDFHPREHRYHYDCLRLHTDSENLLVPLHAYPVSGEV 55
            +R +K+G +APG +E + VDF+P E++YHYDC+R+HT+ ENLL+P+HAYP++ +V
Sbjct:   89 IRMNKRGTLAPGMAEHLKVDFYPSEYKYHYDCIRVHTEEENLLIPMHAYPIANDV 143          
BLAST of mRNA_Ecto-sp13_S_contig89167.20446.1 vs. uniprot
Match: A0A2J8A887_9CHLO (Primary ciliary dyskinesia protein 1 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A887_9CHLO)

HSP 1 Score: 76.6 bits (187), Expect = 3.840e-16
Identity = 29/51 (56.86%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    4 SKKGLVAPGSSEVITVDFHPREHRYHYDCLRLHTDSENLLVPLHAYPVSGE 54
            +KKGL+APG SE + V+F P+++RY+YDC+R+H + EN+L+P+HAYPV+ E
Sbjct:   83 NKKGLLAPGMSEEVVVEFCPQQYRYYYDCVRVHCEEENMLIPVHAYPVANE 133          
BLAST of mRNA_Ecto-sp13_S_contig89167.20446.1 vs. uniprot
Match: A0A7S0RXX1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RXX1_9CHLO)

HSP 1 Score: 78.6 bits (192), Expect = 5.500e-16
Identity = 30/53 (56.60%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    3 CSKKGLVAPGSSEVITVDFHPREHRYHYDCLRLHTDSENLLVPLHAYPVSGEV 55
            C KKG++APG SE + ++F P E RY+YDC+R+H++ ENLL+P+HAYPV  +V
Sbjct:  111 CEKKGVIAPGMSEDVRIEFVPTEWRYYYDCIRIHSEVENLLIPIHAYPVMNDV 163          
BLAST of mRNA_Ecto-sp13_S_contig89167.20446.1 vs. uniprot
Match: A0A7S0WP80_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WP80_9CHLO)

HSP 1 Score: 79.3 bits (194), Expect = 7.320e-16
Identity = 33/51 (64.71%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    4 SKKGLVAPGSSEVITVDFHPREHRYHYDCLRLHTDSENLLVPLHAYPVSGE 54
            +KKG +APG ++VI V+F PRE RY+YDC+R+H++ ENLLVPLHAYPV  E
Sbjct:   95 NKKGALAPGMADVIEVEFTPREFRYYYDCVRIHSEGENLLVPLHAYPVMNE 145          
BLAST of mRNA_Ecto-sp13_S_contig89167.20446.1 vs. uniprot
Match: A0A8J4FJA4_9CHLO (Uncharacterized protein n=4 Tax=Volvox TaxID=3066 RepID=A0A8J4FJA4_9CHLO)

HSP 1 Score: 79.0 bits (193), Expect = 1.000e-15
Identity = 32/51 (62.75%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    4 SKKGLVAPGSSEVITVDFHPREHRYHYDCLRLHTDSENLLVPLHAYPVSGE 54
            +KKGL+APG SE + V+F P  +RY+YDC+R+HT+ ENLLVP+HAYPV+ E
Sbjct:   94 NKKGLLAPGMSEEVVVEFCPSHYRYYYDCVRVHTEDENLLVPIHAYPVANE 144          
BLAST of mRNA_Ecto-sp13_S_contig89167.20446.1 vs. uniprot
Match: A0A835Y2F2_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y2F2_9CHLO)

HSP 1 Score: 78.6 bits (192), Expect = 1.370e-15
Identity = 32/51 (62.75%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    4 SKKGLVAPGSSEVITVDFHPREHRYHYDCLRLHTDSENLLVPLHAYPVSGE 54
            +KKGL+APG SE I V+F P+++RY+YDC+R+H + ENLLVP+HAYPV+ E
Sbjct:   81 TKKGLLAPGMSEEIEVEFAPQQYRYYYDCVRVHCEEENLLVPIHAYPVANE 131          
BLAST of mRNA_Ecto-sp13_S_contig89167.20446.1 vs. uniprot
Match: D8U8K9_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U8K9_VOLCA)

HSP 1 Score: 77.4 bits (189), Expect = 3.480e-15
Identity = 32/53 (60.38%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    3 CS-KKGLVAPGSSEVITVDFHPREHRYHYDCLRLHTDSENLLVPLHAYPVSGE 54
            CS KKGL+APG SE + V+F P  +RY+YDC+R+H++ ENLL+P+HAYPV+ E
Sbjct:   92 CSNKKGLLAPGMSEEVVVEFCPSHYRYYYDCIRVHSEDENLLIPIHAYPVANE 144          
BLAST of mRNA_Ecto-sp13_S_contig89167.20446.1 vs. uniprot
Match: PCDP1_CHLRE (Cilia- and flagella-associated protein 221 homolog n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=PCDP1_CHLRE)

HSP 1 Score: 76.6 bits (187), Expect = 6.470e-15
Identity = 30/51 (58.82%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    4 SKKGLVAPGSSEVITVDFHPREHRYHYDCLRLHTDSENLLVPLHAYPVSGE 54
            +KKGL+APG +E + V+F P ++RY+YDC+R+H + ENLL+PLHAYPV+ E
Sbjct:  165 AKKGLLAPGMTEEVAVEFCPTQYRYYYDCVRVHCEEENLLIPLHAYPVANE 215          
BLAST of mRNA_Ecto-sp13_S_contig89167.20446.1 vs. uniprot
Match: A0A2K3CMR7_CHLRE (Uncharacterized protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CMR7_CHLRE)

HSP 1 Score: 76.6 bits (187), Expect = 6.480e-15
Identity = 30/51 (58.82%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    4 SKKGLVAPGSSEVITVDFHPREHRYHYDCLRLHTDSENLLVPLHAYPVSGE 54
            +KKGL+APG +E + V+F P ++RY+YDC+R+H + ENLL+PLHAYPV+ E
Sbjct:   94 AKKGLLAPGMTEEVAVEFCPTQYRYYYDCVRVHCEEENLLIPLHAYPVANE 144          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig89167.20446.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVH9_ECTSI3.610e-2892.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3YIG3_HETAK7.650e-1854.55Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2J8A887_9CHLO3.840e-1656.86Primary ciliary dyskinesia protein 1 n=1 Tax=Tetra... [more]
A0A7S0RXX1_9CHLO5.500e-1656.60Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A7S0WP80_9CHLO7.320e-1664.71Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A8J4FJA4_9CHLO1.000e-1562.75Uncharacterized protein n=4 Tax=Volvox TaxID=3066 ... [more]
A0A835Y2F2_9CHLO1.370e-1562.75Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
D8U8K9_VOLCA3.480e-1560.38Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
PCDP1_CHLRE6.470e-1558.82Cilia- and flagella-associated protein 221 homolog... [more]
A0A2K3CMR7_CHLRE6.480e-1558.82Uncharacterized protein (Fragment) n=1 Tax=Chlamyd... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029676Primary ciliary dyskinesia protein 1PANTHERPTHR46500FAMILY NOT NAMEDcoord: 3..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig89167contigEcto-sp13_S_contig89167:263..439 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig89167.20446.1mRNA_Ecto-sp13_S_contig89167.20446.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig89167 263..439 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig89167.20446.1 ID=prot_Ecto-sp13_S_contig89167.20446.1|Name=mRNA_Ecto-sp13_S_contig89167.20446.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp
MRCSKKGLVAPGSSEVITVDFHPREHRYHYDCLRLHTDSENLLVPLHAYP
VSGEVGGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029676Gm101