prot_Ecto-sp13_S_contig12465.2043.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12465.2043.1
Unique Nameprot_Ecto-sp13_S_contig12465.2043.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length302
Homology
BLAST of mRNA_Ecto-sp13_S_contig12465.2043.1 vs. uniprot
Match: A0A6H5JPA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA7_9PHAE)

HSP 1 Score: 501 bits (1289), Expect = 2.900e-170
Identity = 290/308 (94.16%), Postives = 292/308 (94.81%), Query Frame = 0
Query:    1 MVRGDPTAVRMGAVAGPEAATSRPALLVTIGPQCAGKTSLLRALAAKSEAAXXXXXXXXXXXXXXXXXXXXX------AVPSVADITIDDHPSVYHKIPTALLLGGCARGRTEDLLLARRPLSDRLGDPGCVETRLVAFRLEGHISAEEFAGRLGECRGQASPAAIAALCWAVESAVSDNVRISTPTVDIFVRENLFPDAISCSQERLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPFLSLEELSRRNVCRFACTGRYVETAAIENALARVGKLYASTAGGDPARLALAA 302
            MVRG PTAVRMGAVAGPEAA SRPALLVTIGPQCAGKTSLLRALAAKSEAAXXXXXXXXXXXXXXXXXXXXX      AV SVAD+TIDDHPSVYHKIPTALLLGGCARG  EDLLLARR LSDRLGDPGCVETRLVAFRLEGHISAEEFAGRLGECRGQASPAAIAALCWAVESAVSDN RISTPTVD+FVRENLFPDAIS SQERLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELP LSLEELSRRNVCRFACTGRYVETAAIENALARV KLYASTAGGDPARLALAA
Sbjct:  261 MVRGGPTAVRMGAVAGPEAAASRPALLVTIGPQCAGKTSLLRALAAKSEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRSVADVTIDDHPSVYHKIPTALLLGGCARGCPEDLLLARRSLSDRLGDPGCVETRLVAFRLEGHISAEEFAGRLGECRGQASPAAIAALCWAVESAVSDNGRISTPTVDVFVRENLFPDAISSSQERLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPILSLEELSRRNVCRFACTGRYVETAAIENALARVDKLYASTAGGDPARLALAA 568          
BLAST of mRNA_Ecto-sp13_S_contig12465.2043.1 vs. uniprot
Match: D8LAX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX8_ECTSI)

HSP 1 Score: 442 bits (1138), Expect = 1.570e-151
Identity = 241/292 (82.53%), Postives = 245/292 (83.90%), Query Frame = 0
Query:   11 MGAVAGPEAATSRPALLVTIGPQCAGKTSLLRALAAKSEAAXXXXXXXXXXXXXXXXXXXXXAVPSVADITIDDHPSVYHKIPTALLLGGCARGRTEDLLLARRPLSDRLGDPGCVETRLVAFRLEGHISAEEFAGRLGECRGQASPAAIAALCWAVESAVSDNVRISTPTVDIFVRENLFPDAISCSQERLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPFLSLEELSRRNVCRFACTGRYVETAAIENALARVGKLYASTAGGDPARLALAA 302
            MGAVAG EAAT+RPALLVTIGPQCAGKTSLLRALAAKSE                                      VYHKIPTALLLGGCARG  EDLLLA+RPLSDRLGDPGCVETRLV FRLEGHISAEEFAGRLGECRGQASPAAIAALC AVESAVSDNVRISTPTVD+FVRENLFPDAIS SQERLAAAA DE+GLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPFLSLEELSRRNVCRFA TGRYVETAAIENALARV KLYASTAGGDPARLALAA
Sbjct:    1 MGAVAGAEAATNRPALLVTIGPQCAGKTSLLRALAAKSE--------------------------------------VYHKIPTALLLGGCARGSPEDLLLAQRPLSDRLGDPGCVETRLVTFRLEGHISAEEFAGRLGECRGQASPAAIAALCRAVESAVSDNVRISTPTVDVFVRENLFPDAISSSQERLAAAATDEDGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPFLSLEELSRRNVCRFAYTGRYVETAAIENALARVDKLYASTAGGDPARLALAA 254          
BLAST of mRNA_Ecto-sp13_S_contig12465.2043.1 vs. uniprot
Match: A0A835Z5Q0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Q0_9STRA)

HSP 1 Score: 194 bits (493), Expect = 5.570e-54
Identity = 122/280 (43.57%), Postives = 156/280 (55.71%), Query Frame = 0
Query:   26 LLVTIGPQCAGKTSLLRALAAKSEAAXXXXXXXXXXXXXXXXXXXXXAVPSVADITIDDHPSVYHKIPTALLLGGCARGRTEDLLLARRPLSDRLGDPGCVETRLVAFRLEGHISAEEFAGR-LGECRGQASPAAIAALCW--AVESAVSDNVRISTPTVDIFVRENLFPDAISCSQERLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPFLSLEELSRRNVCRFACTGRYVETAAIENALARVGKLYASTAGGDPARLALAA 302
            LL+TIGPQCAGKT+ L AL      A                         + D+ IDDHP VY+K+PTA  L   +    +D+LL  + +S+R+ D   V   LVA RLEG ++A+EF  + L        P       W  AVE+AV+  +R+ TPTVD+FV    +P  +  S  RL        G VAWGNTNT+++DYR ALE A+   RPVR+LRWGHELP + L +L  R++ RFA TGRYV   A+  AL RV  LYA T GGDPA L  AA
Sbjct:   94 LLITIGPQCAGKTTTLLALGQSLGGAR------------------------ICDVAIDDHPDVYYKLPTACALDPDSITPQQDVLLFDKTVSERMADYTVVGKCLVAKRLEGLLTADEFREQWLSSVEFYPYPDGEVEELWIAAVEAAVAAGLRMETPTVDLFVPNGHYPRGVRDSNRRLRQECSRHPGPVAWGNTNTKSKDYREALECAQAVNRPVRYLRWGHELPAVPLRDLFARDLRRFAATGRYVPPQAVAAALRRVEHLYARTDGGDPALLTAAA 349          
BLAST of mRNA_Ecto-sp13_S_contig12465.2043.1 vs. uniprot
Match: A0A835YGB3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGB3_9STRA)

HSP 1 Score: 174 bits (440), Expect = 5.490e-47
Identity = 114/283 (40.28%), Postives = 151/283 (53.36%), Query Frame = 0
Query:   26 LLVTIGPQCAGKTSLLRALAAKSEAAXXXXXXXXXXXXXXXXXXXXXAVPSVADITIDDHPSVYHKIPTALLLGGCARGRTEDLLLARRPLSDRLGDPGCVETRLVAFRLEGHISAEEFAGRLGECRGQASPAAIA------ALCWAVESAVSDNVRISTPTVDIFVRENLFPDAISCSQERLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPFLSLEELSRRNVCRFACTGRYVETAAIENALARVGKLYASTAGGDPARLALAA 302
            LL+TIGPQCAGKT+ LR +                                V D+ ID+HP VY+++PTA +L   +    ED+ +  R LSDRL   G     LVA RLEG +S+ +F     E +  A P  +A          +VE+AV++ VR+  PTVD+F+ E   P  +      L        G VAWGNTNT+ARDY  AL  A+   RPV F+R+GHE+P +S+ EL  RN+ RFA TGR++    +  A  RV  LYA T GG+PARLA AA
Sbjct:   71 LLITIGPQCAGKTTTLRKM-------------------------------GVFDVAIDEHPDVYYELPTAYILDPTST-TLEDVTIFGRRLSDRLQYTGVYANMLVAQRLEGLLSSAKFEA---EWKAIAGPYLLADRDVDRIFLESVEAAVAEGVRLYAPTVDLFLPEGHAPKGMREHSVVLRYECHRRRGAVAWGNTNTRARDYAAALATAQECTRPVHFVRYGHEIPAISIRELFGRNLRRFAATGRFIPPQTMWAARQRVKHLYARTGGGEPARLAAAA 318          
BLAST of mRNA_Ecto-sp13_S_contig12465.2043.1 vs. uniprot
Match: W7TBP9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBP9_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 9.560e-16
Identity = 87/288 (30.21%), Postives = 117/288 (40.62%), Query Frame = 0
Query:   24 PALLVTIGPQCAGKTSLLRALAAKSEAAXXXXXXXXXXXXXXXXXXXXXAVPSVADITIDDHPSVYHKIPTALLLGG-------CARGRTEDLLLARRPLSDRLGDPGCVETRLVAFRLEGHISAEEFAGRL---------------------GECRGQASP-------AAIAALCWAVESAVSDNVRISTPTV----DIFVRENLFPDAISCSQERLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHEL-PFLSLEELSRRNVCRFACTGRYV 271
            P+LL+T+GPQCAGKT+LL+ L     +                        P + D+ IDD   +Y  +P  L L G            + D L+  R LS R  D   VE+RLV   L G    E     L                       C  +          A   A      +   D V   +P       +F+ + L P AI  S +RL  +     G VAWGNTN++ARD++ A+  A + GR V F+RWG EL   +  EEL  RNV R    G+YV
Sbjct:   87 PSLLITVGPQCAGKTTLLKHLNESRPSF----------------------APPLVDVAIDDQAGLYVPLPMPLFLEGGRXXXXXXXXXXSLDKLIKGRTLSSRCDDSATVESRLVLGYLHGMWEIENVEQALRALTSXXXXXXXXXXXXXXXXXXCPSEEDEWITLLLHALAKARATIATTTKVDTVATWSPPAASHYQLFLPD-LLPQAIRRSYQRLTRSLCGP-GPVAWGNTNSKARDFKEAILLAGKAGRRVLFIRWGKELGKEVGKEELVLRNVWRAYREGKYV 350          
BLAST of mRNA_Ecto-sp13_S_contig12465.2043.1 vs. uniprot
Match: B8C738_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C738_THAPS)

HSP 1 Score: 78.2 bits (191), Expect = 1.880e-12
Identity = 76/283 (26.86%), Postives = 121/283 (42.76%), Query Frame = 0
Query:   17 PEAATSRPALLVTIGPQCAGKTSLLRALAAKSEAAXXXXXXXXXXXXXXXXXXXXXAVPSVADITIDDHPSVYHKIPTALLLGGCA----RGRTEDLLLARRPLSDRLGDPGCVETRLVAFRLEGHISAEEFAGRLGECRG-----QASP------AAIAALCWAVESAVSDNV----------------RISTPT-VDIFVRENLF---------------PDAISCSQ-ERLA------AAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWG 245
            P +  S+  + +T+GPQC GKT++L+ L                            A     DITIDD   VY  +P  L L   A    +  T +  +  + + DR+ DP   E +LV  RL G ++A +F  RL   +      Q++P      A +A L  AVE  +  N                 +++ P  +D+FV E++F               P + +  + +RL       ++  D    +AWGNTNT+ R++  A+E A  +GRPV F+ +G
Sbjct:   94 PPSTQSKGPIYITVGPQCCGKTTILKRL---------------FGTVFHNNEEEGGASTGGLDITIDDQELVYFPVPIQLFLPDAALPSEQRSTSNQSILGKSVRDRVVDPSNNELKLVIQRLAGKLTAGDFIERLNNPQKNGQQQQSAPLQKNQKAVVADLVSAVEEVIKINTDPKGETTENSMFFAATKLTLPKQIDLFVVESIFRPRPLELMRNTKNNTPSSSALDEAQRLIKSISTDSSVHDSAAPLAWGNTNTRPREFLSAMEAATLSGRPVEFIVFG 361          
BLAST of mRNA_Ecto-sp13_S_contig12465.2043.1 vs. uniprot
Match: A0A4D9D5F8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5F8_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.890e-11
Identity = 49/105 (46.67%), Postives = 61/105 (58.10%), Query Frame = 0
Query:  189 NLFPDAISCSQERLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHEL-PFLSLEELSRRNVCRFACTGRYVETAAIENALARVGKLYASTAG 292
            +L P AI  S +RL+ +     G VAWGNTN++ARD++ A+  A + GR VRFLRWG EL   +  EEL  RNV R    G+YV   AI  AL R   L    AG
Sbjct:  102 DLLPQAIRRSYQRLSRSLCGP-GPVAWGNTNSKARDFKEAILLAGKAGRRVRFLRWGKELGKEVGKEELILRNVWRAYREGKYVPVRAISAALERTKVLLDGRAG 205          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12465.2043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JPA7_9PHAE2.900e-17094.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LAX8_ECTSI1.570e-15182.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z5Q0_9STRA5.570e-5443.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YGB3_9STRA5.490e-4740.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TBP9_9STRA9.560e-1630.21Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
B8C738_THAPS1.880e-1226.86Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A4D9D5F8_9STRA3.890e-1146.67Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12465contigEcto-sp13_S_contig12465:2..2779 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12465.2043.1mRNA_Ecto-sp13_S_contig12465.2043.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12465 2..2782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12465.2043.1 ID=prot_Ecto-sp13_S_contig12465.2043.1|Name=mRNA_Ecto-sp13_S_contig12465.2043.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=302bp
MVRGDPTAVRMGAVAGPEAATSRPALLVTIGPQCAGKTSLLRALAAKSEA
AREERRSSGGGGMTSGDTAAAAAVPSVADITIDDHPSVYHKIPTALLLGG
CARGRTEDLLLARRPLSDRLGDPGCVETRLVAFRLEGHISAEEFAGRLGE
CRGQASPAAIAALCWAVESAVSDNVRISTPTVDIFVRENLFPDAISCSQE
RLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPF
LSLEELSRRNVCRFACTGRYVETAAIENALARVGKLYASTAGGDPARLAL
AA
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