prot_Ecto-sp13_S_contig890.20415.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig890.20415.1
Unique Nameprot_Ecto-sp13_S_contig890.20415.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length80
Homology
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BLAST of mRNA_Ecto-sp13_S_contig890.20415.1 vs. uniprot
Match: D8LPF7_ECTSI (EsV-1-131 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPF7_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 1.640e-40
Identity = 65/78 (83.33%), Postives = 69/78 (88.46%), Query Frame = 0 
Query:    1 MRRAAHRPMEEDPDIDDCFGYFRRKESVVDVQWVKEQIYRTSCVPEKCPATRSFVEIFVGLDREDGEPVVKKDVGFRF 78
            MRRAAHR MEEDPDIDDCF YFRRK+S+VDVQWVKEQIYRTSCVPEK PATRS VEIF+GLDR   E VVK +VGFRF
Sbjct:    1 MRRAAHRQMEEDPDIDDCFAYFRRKDSLVDVQWVKEQIYRTSCVPEKFPATRSLVEIFLGLDRPCEETVVKNEVGFRF 78
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BLAST of mRNA_Ecto-sp13_S_contig890.20415.1 vs. uniprot
Match: Q8QNE8_ESV1K (EsV-1-131 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNE8_ESV1K)

HSP 1 Score: 132 bits (332), Expect = 9.590e-39
Identity = 65/82 (79.27%), Postives = 68/82 (82.93%), Query Frame = 0 
Query:    1 MRRAAHRPMEEDPDIDDCFGYFRRKESVVDVQWVKEQIYRTSCVPEKCPATRSFVEIFV----GLDREDGEPVVKKDVGFRF 78
            MRRAA R MEEDPDID CF YFRRKESVVDVQWVKEQIYRTSCVPE+CPATRS VEIF+    G   +DGE VVK DVGFRF
Sbjct:    4 MRRAAQRQMEEDPDIDGCFAYFRRKESVVDVQWVKEQIYRTSCVPERCPATRSLVEIFLRLGLGAGGQDGEAVVKNDVGFRF 85
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig890.20415.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPF7_ECTSI1.640e-4083.33EsV-1-131 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q8QNE8_ESV1K9.590e-3979.27EsV-1-131 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig890contigEcto-sp13_S_contig890:14171..14410 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig890.20415.1mRNA_Ecto-sp13_S_contig890.20415.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig890 14171..14410 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig890.20415.1 ID=prot_Ecto-sp13_S_contig890.20415.1|Name=mRNA_Ecto-sp13_S_contig890.20415.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=80bp
MRRAAHRPMEEDPDIDDCFGYFRRKESVVDVQWVKEQIYRTSCVPEKCPA
TRSFVEIFVGLDREDGEPVVKKDVGFRFK*
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