prot_Ecto-sp13_S_contig12463.2041.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12463.2041.1
Unique Nameprot_Ecto-sp13_S_contig12463.2041.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length117
Homology
BLAST of mRNA_Ecto-sp13_S_contig12463.2041.1 vs. uniprot
Match: A0A6H5JXR3_9PHAE (AD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXR3_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 6.350e-79
Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 0
Query:    1 DVVPGAPVVDDCMALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLMLGKFRKQLEGPKSG 116
            DVVPGAPVVDDCMALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTAD+CRSLDGDKPGLDRALLMLGKFR QLEGPKSG
Sbjct:   60 DVVPGAPVVDDCMALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADNCRSLDGDKPGLDRALLMLGKFRNQLEGPKSG 175          
BLAST of mRNA_Ecto-sp13_S_contig12463.2041.1 vs. uniprot
Match: A0A7S4A542_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A542_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.050e-19
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 0
Query:   15 LPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLML 103
            LP I      ++E++A +    A A +NP A+  GQA FD  +KTLDCSWS  SI +L+ VR+D PYT D+C SLDG+K  L+R   ++
Sbjct:   88 LPAIDVAACKKRESEAYEAMEAAMAMLNPNASAAGQACFDALSKTLDCSWSGDSINVLDQVRVDAPYTEDACVSLDGNKSSLERIRKIV 176          
BLAST of mRNA_Ecto-sp13_S_contig12463.2041.1 vs. uniprot
Match: A0A8J2SSH3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SSH3_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.870e-18
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 0
Query:   15 LPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLML 103
            LP I      ++E++A +    A A +NP A+  GQA FD  +KTLDCSWS  SI +L+ VR+D PYT D+C SLDG+K  L+R   ++
Sbjct:   88 LPAIDVAACKKRESEAYEAMEAAMAMLNPNASAAGQACFDALSKTLDCSWSGDSINVLDQVRVDAPYTEDACVSLDGNKSSLERIRKIV 176          
BLAST of mRNA_Ecto-sp13_S_contig12463.2041.1 vs. uniprot
Match: A0A397T4J8_9GLOM (Anticodon-binding domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397T4J8_9GLOM)

HSP 1 Score: 82.4 bits (202), Expect = 1.290e-16
Identity = 41/105 (39.05%), Postives = 63/105 (60.00%), Query Frame = 0
Query:   15 LPNISGRELDR---KENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLMLGKFRKQLEGPKSG 116
            +P++    +DR   +E +A++E   A A+I  G T + Q IFD  +KTL C W+ +SI++LE VRIDPPY  D C+++      L +   +L   RK+LE  +SG
Sbjct:  162 VPSVGYVPMDRIQAREIQAVKETQAALARIGVGVTQKAQDIFDALSKTLPCRWAKESIIVLEEVRIDPPYDIDDCKAVPSASGSLTQVRKVLEGERKRLERLESG 266          
BLAST of mRNA_Ecto-sp13_S_contig12463.2041.1 vs. uniprot
Match: A0A150FZM8_GONPE (AD domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FZM8_GONPE)

HSP 1 Score: 79.7 bits (195), Expect = 1.840e-16
Identity = 38/98 (38.78%), Postives = 58/98 (59.18%), Query Frame = 0
Query:   13 MALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLMLGKFRKQL 110
            + LP++      ++E KALQ+A    +++  G T E QAIFD   KT+ C W D+SIV+L++V +D PYT DS RS        +R  ++L   R++L
Sbjct:   61 LELPHVDLERCRKREEKALQQAELESSRVGHGVTKEAQAIFDALVKTMPCVWRDKSIVVLDTVYVDEPYTPDSVRSDKDHTATRERVKMVLRLERERL 158          
BLAST of mRNA_Ecto-sp13_S_contig12463.2041.1 vs. uniprot
Match: A0A836BVG9_9CHLO (AD domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BVG9_9CHLO)

HSP 1 Score: 79.0 bits (193), Expect = 5.830e-16
Identity = 37/98 (37.76%), Postives = 59/98 (60.20%), Query Frame = 0
Query:   13 MALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLMLGKFRKQL 110
            + LP +      ++E +ALQ+A    A++  G T E QAIFD   KT+   W ++SIV+L+SV +D PYT D+CRS +  +   +R  ++L   R++L
Sbjct:   77 LTLPLVDLERCRKREERALQQAELESARVGEGVTKEAQAIFDALVKTMPTVWRNKSIVVLDSVYVDEPYTPDTCRSDEEHRATRERVKMVLKLERQRL 174          
BLAST of mRNA_Ecto-sp13_S_contig12463.2041.1 vs. uniprot
Match: K0TED1_THAOC (AD domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TED1_THAOC)

HSP 1 Score: 77.4 bits (189), Expect = 3.040e-15
Identity = 41/94 (43.62%), Postives = 60/94 (63.83%), Query Frame = 0
Query:   13 MALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTL-DCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLMLGK 105
            + LPN++ R L+ +E +AL+ A +A+++IN  A+ EGQ IFD   K   +  W   SI++L+ +R+DPPYTADSC SL     GLD   L+  K
Sbjct:   95 LPLPNVNRRALEDRERRALRIAEEAFSKINDKASVEGQQIFDKLLKACNEVEWRGNSILVLKEIRVDPPYTADSC-SLIKKSGGLDAHSLVRVK 187          
BLAST of mRNA_Ecto-sp13_S_contig12463.2041.1 vs. uniprot
Match: M1V5U3_CYAM1 (AD domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1V5U3_CYAM1)

HSP 1 Score: 75.9 bits (185), Expect = 1.510e-14
Identity = 34/97 (35.05%), Postives = 59/97 (60.82%), Query Frame = 0
Query:   14 ALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLMLGKFRKQL 110
            +LP +S   L ++E+++L  A +  +++  G +  GQ +FD   +TL C W + +I++L+SV + PPYTA+  RSLD D+    R  L+L +   +L
Sbjct:  100 SLPALSIEALRQRESRSLARARERSSKLGRGVSVLGQLVFDALDRTLPCRWDEPNIIVLDSVYVPPPYTAEGVRSLDDDEAAAQRVRLVLERELPRL 196          
BLAST of mRNA_Ecto-sp13_S_contig12463.2041.1 vs. uniprot
Match: A0A4P9XH48_9FUNG (Anticodon-binding domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XH48_9FUNG)

HSP 1 Score: 76.6 bits (187), Expect = 1.600e-14
Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query:   15 LPNISGRELDR---KENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLMLGKFRKQLE 111
            +P +    LDR   +E KA++EA +A A+   G   E Q IFD  +KTL C W +Q+IV+L+ V ++PPYT +SC++       L R   + G+ RK+L+
Sbjct:  155 MPTVGPLPLDRLRAREAKAIKEAHQAEARRGVGVDKEAQDIFDALSKTLPCRWHEQTIVVLDEVLVEPPYTVESCKANASSSSSLARVKKLEGE-RKRLK 253          
BLAST of mRNA_Ecto-sp13_S_contig12463.2041.1 vs. uniprot
Match: A0A077WPF1_9FUNG (AD domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WPF1_9FUNG)

HSP 1 Score: 75.5 bits (184), Expect = 2.120e-14
Identity = 35/101 (34.65%), Postives = 55/101 (54.46%), Query Frame = 0
Query:   11 DCMALPNISGRELDRKENKALQEATKAWAQINPGATNEGQAIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRALLMLGKFRKQLE 111
            D + +  +    LD +E+  ++   +  A++  G T E Q IFD  +KTL C WS+ +IV+L+ V I PPY  DSC++       L R   +L   R++LE
Sbjct:  105 DFLPINYVDTNRLDARESSGVKNMRQRVAKMGVGVTKEAQDIFDALSKTLPCRWSNDTIVVLDEVLIQPPYDVDSCKANSSSASSLARVKKVLEGERRRLE 205          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12463.2041.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXR3_9PHAE6.350e-7998.28AD domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S4A542_9STRA1.050e-1946.07Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J2SSH3_9STRA1.870e-1846.07Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A397T4J8_9GLOM1.290e-1639.05Anticodon-binding domain-containing protein n=1 Ta... [more]
A0A150FZM8_GONPE1.840e-1638.78AD domain-containing protein n=1 Tax=Gonium pector... [more]
A0A836BVG9_9CHLO5.830e-1637.76AD domain-containing protein n=1 Tax=Edaphochlamys... [more]
K0TED1_THAOC3.040e-1543.62AD domain-containing protein n=1 Tax=Thalassiosira... [more]
M1V5U3_CYAM11.510e-1435.05AD domain-containing protein n=2 Tax=cellular orga... [more]
A0A4P9XH48_9FUNG1.600e-1439.00Anticodon-binding domain-containing protein n=1 Ta... [more]
A0A077WPF1_9FUNG2.120e-1434.65AD domain-containing protein n=1 Tax=Lichtheimia r... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019181Anticodon-binding domainSMARTSM00995AD_2coord: 14..106
e-value: 8.1E-19
score: 78.5
IPR019181Anticodon-binding domainPFAMPF09793ADcoord: 17..93
e-value: 8.7E-22
score: 77.1
IPR039683Protein Lsm12-likePANTHERPTHR13542LSM12 HOMOLOGcoord: 14..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12463contigEcto-sp13_S_contig12463:1..2186 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12463.2041.1mRNA_Ecto-sp13_S_contig12463.2041.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12463 1..2186 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12463.2041.1 ID=prot_Ecto-sp13_S_contig12463.2041.1|Name=mRNA_Ecto-sp13_S_contig12463.2041.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=117bp
DVVPGAPVVDDCMALPNISGRELDRKENKALQEATKAWAQINPGATNEGQ
AIFDLFTKTLDCSWSDQSIVILESVRIDPPYTADSCRSLDGDKPGLDRAL
LMLGKFRKQLEGPKSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019181Anticodon-binding_dom
IPR039683Lsm12-like