prot_Ecto-sp13_S_contig10175.204.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10175.204.1
Unique Nameprot_Ecto-sp13_S_contig10175.204.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length84
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10175.204.1 vs. uniprot
Match: A0A6H5KN97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN97_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 1.100e-43
Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 0 
Query:    1 MSINARAREQPNGGLVLQAAVPDDDASEALGGGLRKHKGTRNAGKSPGGWNNFSKRRDKKPDKKRKKSMPRPASAPPANTAAA 83
            MSINARAREQPNGGLVLQAAVPDDDA+EALGGGLRKHKGTRNAGKSP GWNNFSKRRDKKPDKKRKKSMPRPASAPPANTAAA
Sbjct:  483 MSINARAREQPNGGLVLQAAVPDDDATEALGGGLRKHKGTRNAGKSPDGWNNFSKRRDKKPDKKRKKSMPRPASAPPANTAAA 565
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BLAST of mRNA_Ecto-sp13_S_contig10175.204.1 vs. uniprot
Match: D8LHJ6_ECTSI (tRNA (Guanine-n(7)-)-methyltransferase complex subunit, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ6_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 8.230e-25
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0 
Query:    1 MSINARAREQPNGGLVLQAAVPDDDASEALGGGLRKHKGTRNAGKSPGGWNNFSK 55
            MSINARAREQPNGGLVLQAAVPD+DA+EALGGGLRKHKGTR+AGKSP GWNNFSK
Sbjct:  403 MSINARAREQPNGGLVLQAAVPDEDATEALGGGLRKHKGTRSAGKSPDGWNNFSK 457
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10175.204.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KN97_9PHAE1.100e-4397.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHJ6_ECTSI8.230e-2592.73tRNA (Guanine-n(7)-)-methyltransferase complex sub... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10175contigEcto-sp13_S_contig10175:4165..5938 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10175.204.1mRNA_Ecto-sp13_S_contig10175.204.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10175 3804..5967 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10175.204.1 ID=prot_Ecto-sp13_S_contig10175.204.1|Name=mRNA_Ecto-sp13_S_contig10175.204.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp
MSINARAREQPNGGLVLQAAVPDDDASEALGGGLRKHKGTRNAGKSPGGW
NNFSKRRDKKPDKKRKKSMPRPASAPPANTAAA*
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