mRNA_Ecto-sp13_S_contig12452.2036.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12452.2036.1
Unique NamemRNA_Ecto-sp13_S_contig12452.2036.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12452.2036.1 vs. uniprot
Match: D8LDI4_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDI4_ECTSI)

HSP 1 Score: 508 bits (1309), Expect = 3.990e-171
Identity = 288/334 (86.23%), Postives = 290/334 (86.83%), Query Frame = 1
Query:    1 QIPVEAAVNKTEVEAYKERLNKRQKCDPKANTXXXXXXXXXXXXXXXEIKPVVPLSACLARLAADETLPDYRSPATGKAGPALKHVRLGNFPRYLLVQLRRYYVDTDWQPKKMDVEVDVPLTLDLESLRSTGMQADEVPMPEGDDAVPPAADDPAAAXXXGSAGSGAQGGAVVPDAELVSQLMAMGFQENGCRRAAVAVNNASAEVAMNWVLEHMGDADFNDPLPAPGASTGTSAAAASGD---AAPDPEALMMLVSLGFTERQASGALKATGGDAARGADWLYSHTDDLDKAVSEASERAASALFQLDPKAAAAGGEGGGSASDASIDDGPGR 993
            QIPVEAAVNKTEVEAYKERLNKRQKCDPKA T               EIKPVVPLSACLARLAADETLPDYRSPATGKAGPALKHVRLGNFPRYLLVQLRRYYVDTDWQPKKMDVEV+VPLTLDLE+LRSTGMQADEVPMPEGDDAVPPAADD    XXX SAGSGAQG AVVPDAELVSQLMAMGFQENGCRRAAVAVNNASAEVAMNWVLEHMGDADFNDPLPAPGASTGT           AAPDPEALMMLVSLGFTERQASGALKATGGDAARGADWLYSHTDDLDKAVSE          QLDPKAAAAGGEGGGSASDA IDDGPGR
Sbjct:  563 QIPVEAAVNKTEVEAYKERLNKRQKCDPKATTTNNEEEVEE------EIKPVVPLSACLARLAADETLPDYRSPATGKAGPALKHVRLGNFPRYLLVQLRRYYVDTDWQPKKMDVEVEVPLTLDLEALRSTGMQADEVPMPEGDDAVPPAADDXXXXXXXXSAGSGAQGRAVVPDAELVSQLMAMGFQENGCRRAAVAVNNASAEVAMNWVLEHMGDADFNDPLPAPGASTGTPXXXXXXXXXXAAPDPEALMMLVSLGFTERQASGALKATGGDAARGADWLYSHTDDLDKAVSE----------QLDPKAAAAGGEGGGSASDAPIDDGPGR 880          
BLAST of mRNA_Ecto-sp13_S_contig12452.2036.1 vs. uniprot
Match: A0A836CMU5_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMU5_9STRA)

HSP 1 Score: 232 bits (592), Expect = 6.910e-66
Identity = 157/334 (47.01%), Postives = 197/334 (58.98%), Query Frame = 1
Query:    1 QIPVEAAVNKTEVEAYKERLNKRQKCDPKANTXXXXXXXXXXXXXXX---EIKPVVPLSACLARLAADETLPDYRSPATGKAGPALKHVRLGNFPRYLLVQLRRYYVDTDWQPKKMDVEVDVPLTLDLESLRSTGMQADEVPMPEGDDAVPPAADDPAAAXXXGSAGSGAQGGAVVPDAELVSQLMAMGFQENGCRRAAVAVNNASAEVAMNWVLEHMGDADFNDPLPAPGASTGTSAAAASGDAAPDPEALMMLVSLGFTERQASGALKATGGDAARGADWLYSHTDDLDKAVSEASERAASALFQLDPKAAAAGGEGGGSASDASIDDGPGR 993
            +IP+EAA NK EVEAYKER++K+QK    A T                  E++P VPLSACL    A E + ++ S A    G A K  RL NFPRYLLVQL+RYYVD  WQPKK++VEVDVP  LDL + R+ G+Q  E  +PE  + V  AAD  AA     +  S       VPD  +V+QL+ MG   NG ++AA+A  NAS+E AM W  EH  DADF+ P+   GA+   +AA A+G A+ DP  +  L   GFTE Q   ALK+TGG A R ADWL+SH DD+D AV+ A+   A         AA AG  GG  A DA+IDDG G+
Sbjct:  540 KIPLEAATNKAEVEAYKERVSKKQKVGDAAQTSAAEDEEASSAHAPFAASEVRPAVPLSACLETFFAPEMVANFISTAVPGRGMASKRQRLANFPRYLLVQLKRYYVDESWQPKKLEVEVDVPDKLDLTAFRAQGLQPGESLLPE--EPVGGAADAAAALAPSPAVAS-------VPDEAIVAQLLDMGLSLNGSKKAALATGNASSEAAMEWYFEHSTDADFDSPVMEAGAAA--AAAPATGGASFDPATVQELCGFGFTEEQVKAALKSTGGAADRAADWLFSHADDMDAAVAAANGAGA--------VAAPAGSAGG--ADDAAIDDGEGK 852          
BLAST of mRNA_Ecto-sp13_S_contig12452.2036.1 vs. uniprot
Match: A0A7S3C7D5_9CHLO (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3C7D5_9CHLO)

HSP 1 Score: 224 bits (571), Expect = 6.010e-63
Identity = 133/296 (44.93%), Postives = 171/296 (57.77%), Query Frame = 1
Query:    4 IPVEAAVNKTEVEAYKERLNKRQKCDPKANTXXXXXXXXXXXXXXXEIKPVVPLSACLARLAADETLPDYRSPATGKAGPALKHVRLGNFPRYLLVQLRRYYVDTDWQPKKMDVEVDVPLTLDLESLRSTGMQADEVPMPEGDDAVPPAADDPAAAXXXGSAGSGAQGGAVVPDAELVSQLMAMGFQENGCRRAAVAVNNASAEVAMNWVLEHMGDADFNDPLPAPGASTGTSAAAASGDAAPDPEALMMLVSLGFTERQASGALKATGGDAARGADWLYSHTDDLDKAVSEASER 891
            +PV  A N  +VE Y++R  KRQK D                    ++ P VP SACL   A D+ + D+ S A  +   A + VR   FP YL+V LRRYYVD  W+P K++V VDVP  +DLE LR +G+ A E  +PE ++ V               AG GA   +V P  E+VSQLMAMGF ENGC+RAA+A+ NASAEV M W+ +HM DA+FNDP+         S A A    A +PE+++ML S+GFTERQ   AL A GG   R ADWL+SH DDLD A++E   R
Sbjct:  562 VPVGQATNAKDVEEYEDRQRKRQKGD------------GGMAAEEPKVVPKVPFSACLNAFAQDDNVDDFYSTALRRKSVAARRVRFKTFPPYLVVYLRRYYVDAAWRPCKLEVSVDVPSEIDLEHLRGSGLAAGEEELPEEEEGV--------------GAGRGAASESVEPSQEIVSQLMAMGFSENGCKRAAIAMQNASAEVCMEWIFQHMEDANFNDPI------IQESRAEAVATKAHNPESIVMLQSMGFTERQCGAALDACGGSVERAADWLFSHADDLDAAIAEVEGR 825          
BLAST of mRNA_Ecto-sp13_S_contig12452.2036.1 vs. uniprot
Match: A0A7S2D451_9STRA (Ubiquitinyl hydrolase 1 (Fragment) n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D451_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.040e-60
Identity = 151/325 (46.46%), Postives = 194/325 (59.69%), Query Frame = 1
Query:    4 IPVEAAVNKTEVEAYKERLN-KRQKCDPKANTXXXXXXXXXXXXXXXEIKPVVPLSACLARLAADETLPDYRSPATG-KAGPALKHVRLGNFPRYLLVQLRRYYVDTDWQPKKMDVEVDVPLTLDLESLR--STGMQADEVPMP--EGDDAVPPAADDPAAAXXXGSAGSGAQGGAVVPDAELVSQLMAMGFQENGCRRAAVAVNNASAEVAMNWVLEHMGDADFNDPLPAPG----ASTGTSAAAASGDAAPDPEALMMLVSLGFTERQASGALKATGGDAARGADWLYSHTDDLDKAVSEASERAASALFQLDPKAAAAGGEG 948
            IP+  A NK ++E Y+E    KR K + K         XXX       + P+VPLSACL + AA E + D++SPA G +   A K +R   FP +LL++ +RYYVD  W PKK++V +DVPLTLDLE LR  STG+ AD  P P  EG+  +P   + PA A         A    + PD  +V+QL++MGF ENGC+RAAVA N  + E +M W+  HM DADFN+PLP PG    A   T A AA GD  P+PE +MML S+GF++  A+GALKAT  D  R ADWL+SH+DDLD AV+            LD  AAA GG G
Sbjct:  534 IPLTEATNKEQIEVYQETQRLKRAKIEEKEGDGKAKEAXXXGEGEA--VLPLVPLSACLEQWAAPEVMADFKSPALGGQITTAEKSIRFTTFPPFLLIKAQRYYVDETWTPKKLEVRLDVPLTLDLEHLRAPSTGVGADGTPSPFQEGEVPMPDEPEVPATAT--------AAPEVIEPDEGVVAQLVSMGFGENGCKRAAVA-NANNVEASMEWIFAHMEDADFNEPLPPPGTTPPADAATGAGAAGGDG-PNPEHVMMLTSMGFSDVHAAGALKATDNDMERAADWLFSHSDDLDGAVAA-----------LDAGAAAGGGGG 835          
BLAST of mRNA_Ecto-sp13_S_contig12452.2036.1 vs. uniprot
Match: A0A090N390_OSTTA (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N390_OSTTA)

HSP 1 Score: 216 bits (549), Expect = 3.280e-60
Identity = 132/301 (43.85%), Postives = 173/301 (57.48%), Query Frame = 1
Query:    1 QIPVEAAVNKTEVEAYKERLNKRQKCDPKANTXXXXXXXXXXXXXXXEIKPVVPLSACLARLAADETLPDYRSPATGKAGPALKHVRLGNFPRYLLVQLRRYYVDTDWQPKKMDVEVDVPLTLDLESLRSTGMQADEVPMPEGDDAVPPAADDPAAAXXXGSAGSGAQGGAVVPDAELVSQLMAMGFQENGCRRAAVAVNNASAEVAMNWVLEHMGDADFNDPLPAPGASTGTSAAAASGDAAPDPEALMMLVSLGFTERQASGALKATGGDAARGADWLYSHTDDLDKAVSEASERAASA 903
            ++P++ A NK  V+A++ER  KR K +                     ++P VP SACL    A ET+ D+ S A  +   A K  R+   P +L VQLRRY+V  DW PKK+DV VDVP T+ LE+LR+ G+Q DE+ +PE + A   A+  P                 V PDA +VS LMAMGF ENG +RAA+A NNAS E++M WV  HM D DFNDPLP        SAA+    AA DPE++ ML S+GF E  A+ ALKA  G+  R ADWL+SH DDL  A++E +  + SA
Sbjct:  484 EVPLDKATNKESVDAFRERELKRAKTES--------------DDVEEIVRPEVPFSACLEAFGATETIEDFYSSALKRRSIASKTTRVKTMPNFLAVQLRRYFVGEDWTPKKLDVLVDVPKTISLENLRAMGLQPDEIVLPEDETANTAASSAPVR---------------VEPDAAIVSALMAMGFSENGSKRAALATNNASTELSMEWVFAHMEDVDFNDPLP------DQSAASEPAMAASDPESVTMLTSMGFDETAANAALKACSGNLERAADWLFSHADDLPSAIAEVNGASTSA 749          
BLAST of mRNA_Ecto-sp13_S_contig12452.2036.1 vs. uniprot
Match: A0A7S3F8Z6_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F8Z6_9EUKA)

HSP 1 Score: 206 bits (524), Expect = 6.920e-60
Identity = 136/295 (46.10%), Postives = 171/295 (57.97%), Query Frame = 1
Query:    1 QIPVEAAVNKTEVEAYK-ERLNKRQKCDPKANTXXXXXXXXXXXXXXXEIKPVVPLSACLARLAADETLPDYRSPATGKAGPALKHVRLGNFPRYLLVQLRRYYVDTDWQPKKMDVEVDVPLTLDLESLRSTGMQADEVPMPEGDDAVPPAADDPAAAXXXGSAGSGAQGGAVVPDAELVSQLMAMGFQENGCRRAAVAVNNASAEVAMNWVLEHMGDADFNDPLPAPGASTGTSAAAASGDAAPDPEALMMLVSLGFTERQASGALKATGGDAARGADWLYSHTDDLDKAVSEA 882
            +IP++ A NK E+ AY+ E   KRQK D  A+                 + P VP  ACLA+  A E +  +R    G++G A K VR   FPRYL+V +RRYY D  W  KK+ V+V VP TLDL +LRSTG    E  +PE D+A    A  PAAA               VP+ ++V+QL+AMGF ENG +RAA+A  NASAE AM WV  H+ DADFNDP+P P A     AAA       DPE + MLV + F+E  A GAL AT G+  R ADWL+SH DDLD AV++A
Sbjct:   59 EIPLDMARNKDELAAYEAESALKRQKLDDGADPTTAAADDP--------VVPNVPFEACLAKFGAPEVIDSFR----GRSG-AQKTVRFKTFPRYLVVNMRRYYAD-GWTMKKLAVQVHVPETLDLTALRSTGPSDGETLLPEADEAT---AAQPAAAGP-------------VPNEDIVAQLIAMGFSENGSKRAALATGNASAETAMEWVFSHLEDADFNDPIPPPNAEPAAPAAA-------DPEKIAMLVGMSFSEEHARGALAATDGNLERAADWLFSHMDDLDSAVAQA 316          
BLAST of mRNA_Ecto-sp13_S_contig12452.2036.1 vs. uniprot
Match: A0A7S0IY10_9EUKA (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IY10_9EUKA)

HSP 1 Score: 212 bits (540), Expect = 1.350e-59
Identity = 138/299 (46.15%), Postives = 174/299 (58.19%), Query Frame = 1
Query:    4 IPVEAAVNKTEVEAYKERLN-KRQK-----CDPKANTXXXXXXXXXXXXXXXEIKPVVPLSACLARLAADETLPDYRSPATGKAGPALKHVRLGNFPRYLLVQLRRYYVDTDWQPKKMDVEVDVPLTLDLESLRSTGMQADEVPMPEGDDAVPPAADDPAAAXXXGSAGSGAQGGAVVPDAELVSQLMAMGFQENGCRRAAVAVNNASAEVAMNWVLEHMGDADFNDPLPAPGASTGTSAAAASGDAAPDPEALMMLVSLGFTERQASGALKATGGDAARGADWLYSHTDDLDKAVSEA 882
            IP++ A N+ EV AY+ER   KRQK      D +A+                 + P+VP  ACLA+ AA E L  +R    G+ G A +  R   FPRYL+V ++RYY D DW  KK+ V V VP TLDL  LR  G+QADE  +PE ++A P AA  P                 V PD  +V+QLMAMGF ENG +RAA+AVNN+SAE AM WV  H+ DADFNDPLP PG        A + D +   E++ +L ++GF+ER A GAL AT G   R ADWL+SH DDLD+AV EA
Sbjct:  433 IPIDQADNRAEVAAYEERSREKRQKVGEAVADKEADKEEP-------------VVPLVPFEACLAKAAASEPLEVFR----GRTG-AERATRFKTFPRYLMVHMQRYYQDVDWTAKKLSVRVPVPETLDLTGLRGGGLQADETLLPEEEEAAPAAAPAP-----------------VAPDEAVVAQLMAMGFSENGSKRAALAVNNSSAEQAMEWVFAHLEDADFNDPLPPPGVRP-----AVADDVSA--ESVSVLEAMGFSERHARGALTATSGSIERAADWLFSHVDDLDRAVDEA 689          
BLAST of mRNA_Ecto-sp13_S_contig12452.2036.1 vs. uniprot
Match: A0A5J4Y737_9CHLO (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y737_9CHLO)

HSP 1 Score: 215 bits (547), Expect = 1.450e-59
Identity = 149/347 (42.94%), Postives = 197/347 (56.77%), Query Frame = 1
Query:    4 IPVEAAVNKTEVEAYKERLNKRQKC-----------DPKANTXXXXXXXXXXXXXXXEIKPVVPLSACLARLAADETLPDYRSPATGKAGPALKHVRLGNFPRYLLVQLRRYYVDTDWQPKKMDVEVDVPLTLDLESLRSTGMQADEVPMPEGDDAVPPAADDPAAAXXX-GSAGSGAQGGAVVPDAELVSQLMAMGFQENGCRRAAVAVNNASAEVAMNWVLEHMGDADFNDPLPAPG-----ASTGTSAAAASGDAAPDPEALMMLVSLGFTERQASGALKATGGDAARGADWLYSHTDDLDKAVSEASERAASALFQLDPKAAAAGGEGGGSASDASIDDGPGR 993
            IPV+AA NK E+E ++ER  KR K            D  AN+                + P VP SACLA+ A +E + DY S A G    A +  R+ NFP YL++Q+ RY+V   W  KK++V VDVP  +DLE LR +G Q  E   PE      PA   PA       +A +  Q  +V PD E+V+QL+ MGF ENG +RAA+A  N  AE AM WVL HM DA+FN+P+  P      + T T+ +A++G AA DPE +MMLVS+GFT+ QA+ ALKA  G   R ADWL+SH DDLD AV+  S  AA       P+AA +  +    A+ + +DDGPG+
Sbjct:  522 IPVDAATNKDELEDFQEREAKRAKLKSENAHAYIQEDTSANSSGQAKHITADNADSEMVLPRVPFSACLAKWAGEEVMADYFSAAVGHKTQAKRFSRIANFPPYLMLQMNRYFVTEQWVAKKLEVLVDVPEQVDLEFLRGSGPQPHEQLQPEE-----PATSSPAGGLGALAAAAAEQQQASVQPDPEIVNQLVGMGFSENGSKRAAIATQNMGAEGAMEWVLGHMEDANFNEPMSQPPETAAPSQTSTAGSASAGPAA-DPETVMMLVSMGFTDAQAAAALKACHGSLERAADWLFSHADDLDFAVAAVSGAAA-------PEAATSTQD----AAPSKLDDGPGQ 851          
BLAST of mRNA_Ecto-sp13_S_contig12452.2036.1 vs. uniprot
Match: A0A7S0NC19_9CRYP (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0NC19_9CRYP)

HSP 1 Score: 212 bits (540), Expect = 2.520e-59
Identity = 133/298 (44.63%), Postives = 172/298 (57.72%), Query Frame = 1
Query:    4 IPVEAAVNKTEVEAYKERLNKRQKCDPKANTXXXXXXXXXXXXXXXEIKPVVPLSACLARLAADETLPDYRSPATGKAGPALKHVRLGNFPRYLLVQLRRYYVDTDWQPKKMDVEVDVPLTLDLESLRSTGMQADEVPMPEGDDAVPPAADDPAAAXXXGSAGSGAQGGAVVPDAELVSQLMAMGFQENGCRRAAVAVNNASAEVAMNWVLEHMGDADFNDPLPAPGASTGTSAAAASGDAAPDPEALMMLVSLGFTERQASGALKATGGDAARGADWLYSHTDDLDKA-VSEASERA 894
            IP++AA NK EV++Y+ER  KRQK +                     +K  +P  AC++    +  + DY SPATG  G A+K  R+  FP+YL V +RRY +  DW+PKK+D  + +P TLDLESLRS   Q  E  +PE                  GSA +G      VPD  +V QL+ MGF ENGC+RAA+A NNASAE AM WVL+HMGD DFN+P+ AP   +G S A   G A  DP+A+ ML S+GF +  A  AL+ TGGD  R +DWL S  D+LD   V EAS+ A
Sbjct:  415 IPLDAATNKDEVQSYEERNAKRQKNE------------ISEAEKEEPVKAHIPFDACISSYMKEVVVEDYLSPATGSKGAAVKSTRIKRFPKYLCVHMRRYVLGEDWRPKKLDAMITLPETLDLESLRSQEHQPGEELLPES---------------ASGSASAGP-----VPDEAIVRQLVDMGFGENGCKRAALATNNASAEAAMEWVLQHMGDPDFNEPISAP---SGQSQA---GSATVDPDAVEMLCSMGFAKHHAERALRETGGDIQRASDWLLSRVDELDAMDVEEASQPA 674          
BLAST of mRNA_Ecto-sp13_S_contig12452.2036.1 vs. uniprot
Match: A0A7S1SZS2_9CHLO (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SZS2_9CHLO)

HSP 1 Score: 213 bits (541), Expect = 6.480e-59
Identity = 134/307 (43.65%), Postives = 177/307 (57.65%), Query Frame = 1
Query:    4 IPVEAAVNKTEVEAYKERLNKRQK-CDPKANTXXXXXXXXXXXXXXXEIKPVVPLSACLARLAADETLPDYRSPATGKAGPALKHVRLGNFPRYLLVQLRRYYVDTDWQPKKMDVEVDVPLTLDLESLRSTGMQADEVPMPEGDDAVPPAADDPAAAXXXGSAGSGAQGGAVVPDAELVSQLMAMGFQENGCRRAAVAVNNASAEVAMNWVLEHMGDADFNDPLPAPGASTGTSAAAASGDAAPDPEALMMLVSLGFTERQASGALKATGGDAARGADWLYSHTDDLDKAVSEASERAASALFQLDP 921
            IP+E AVN+ E+EAYKER  KRQK  +  A+                 + P VP  ACLA+L  +  + DY S A GK   A   VRL   P  L+VQ+RRY+VDTDW PKKM+V V+VP TL LE+ RS G Q D+   PE ++A+P             S  S A   A  P+ E+VSQLM+MGF ENG +RAA+A  N+SAE +M WV  HM D DFN PLP P      + A+ + DA     A+  L ++GFTE QA  ALK++ G+  R  DWL+SH D+LD  V++ +  A++     +P
Sbjct:  497 IPLEDAVNRDELEAYKERELKRQKLAEEGADAYIGEETQAAATEKEDPVIPQVPFQACLAQLGRESIMEDYFSAALGKKVQASHSVRLATMPPLLVVQMRRYFVDTDWTPKKMNVLVEVPETLSLEAFRSAGPQPDDKLQPEVEEALP---------TGHASVSSSA---APQPNPEIVSQLMSMGFSENGSKRAALATGNSSAEASMEWVFGHMEDPDFNSPLPDPADVASANGASDALDAV----AMSSLTAMGFTEEQAKAALKSSDGNVERAGDWLFSHMDNLDSEVAKVNSAASATANPTEP 787          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12452.2036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDI4_ECTSI3.990e-17186.23Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ecto... [more]
A0A836CMU5_9STRA6.910e-6647.01Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Trib... [more]
A0A7S3C7D5_9CHLO6.010e-6344.93Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Chlo... [more]
A0A7S2D451_9STRA1.040e-6046.46Ubiquitinyl hydrolase 1 (Fragment) n=2 Tax=Florenc... [more]
A0A090N390_OSTTA3.280e-6043.85Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ostr... [more]
A0A7S3F8Z6_9EUKA6.920e-6046.10Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S0IY10_9EUKA1.350e-5946.15Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Calcidi... [more]
A0A5J4Y737_9CHLO1.450e-5942.94Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Treb... [more]
A0A7S0NC19_9CRYP2.520e-5944.63Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Gemi... [more]
A0A7S1SZS2_9CHLO6.480e-5943.65Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tetr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12452contigEcto-sp13_S_contig12452:468..4877 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score513.1
Seed ortholog evalue9.9e-143
Seed eggNOG ortholog2880.D8LDI4
Model size993
KEGG koko:K11836
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0004843,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010604,GO:0016579,GO:0016787,GO:0019222,GO:0019538,GO:0019783,GO:0030162,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0032182,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0036211,GO:0036459,GO:0042176,GO:0043130,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045732,GO:0045862,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0061136,GO:0065007,GO:0070011,GO:0070646,GO:0070647,GO:0071108,GO:0071704,GO:0080090,GO:0101005,GO:0140096,GO:1901564,GO:1901800,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:2000058,GO:2000060
Exons6
EggNOG free text desc.Pfam Zn-finger in ubiquitin-hydrolases and other protein
EggNOG OGsCOG5207@1,KOG0944@2759
Ec32 ortholog descriptionUBA-like
Ec32 orthologEc-15_000480.2
EC3.4.19.12
Cds size993
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12452.2036.1prot_Ecto-sp13_S_contig12452.2036.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12452 468..4877 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462663.2124844-CDS-Ecto-sp13_S_contig12452:467..5511681462663.2124844-CDS-Ecto-sp13_S_contig12452:467..551Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12452 468..551 -
1681462663.2254543-CDS-Ecto-sp13_S_contig12452:1295..15911681462663.2254543-CDS-Ecto-sp13_S_contig12452:1295..1591Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12452 1296..1591 -
1681462663.2352872-CDS-Ecto-sp13_S_contig12452:1838..19461681462663.2352872-CDS-Ecto-sp13_S_contig12452:1838..1946Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12452 1839..1946 -
1681462663.2451544-CDS-Ecto-sp13_S_contig12452:2876..29791681462663.2451544-CDS-Ecto-sp13_S_contig12452:2876..2979Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12452 2877..2979 -
1681462663.2555976-CDS-Ecto-sp13_S_contig12452:3983..40831681462663.2555976-CDS-Ecto-sp13_S_contig12452:3983..4083Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12452 3984..4083 -
1681462663.2683642-CDS-Ecto-sp13_S_contig12452:4575..48771681462663.2683642-CDS-Ecto-sp13_S_contig12452:4575..4877Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12452 4576..4877 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12452.2036.1

>prot_Ecto-sp13_S_contig12452.2036.1 ID=prot_Ecto-sp13_S_contig12452.2036.1|Name=mRNA_Ecto-sp13_S_contig12452.2036.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=331bp
QIPVEAAVNKTEVEAYKERLNKRQKCDPKANTTTTANNNEEEAEEEEEIK
PVVPLSACLARLAADETLPDYRSPATGKAGPALKHVRLGNFPRYLLVQLR
RYYVDTDWQPKKMDVEVDVPLTLDLESLRSTGMQADEVPMPEGDDAVPPA
ADDPAAAPAAGSAGSGAQGGAVVPDAELVSQLMAMGFQENGCRRAAVAVN
NASAEVAMNWVLEHMGDADFNDPLPAPGASTGTSAAAASGDAAPDPEALM
MLVSLGFTERQASGALKATGGDAARGADWLYSHTDDLDKAVSEASERAAS
ALFQLDPKAAAAGGEGGGSASDASIDDGPGR
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mRNA from alignment at Ecto-sp13_S_contig12452:468..4877-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12452.2036.1 ID=mRNA_Ecto-sp13_S_contig12452.2036.1|Name=mRNA_Ecto-sp13_S_contig12452.2036.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4410bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12452:468..4877- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGATCCCGGTGGAAGCAGCCGTCAACAAGACCGAGGTCGAGGCCTACAA AGAACGCCTCAACAAGAGGCAGAAGTGCGACCCCAAGGCCAACACCACCA CCACCGCCAACAACAACGAGGAGGAGGCGGAGGAGGAGGAGGAGATCAAG CCGGTCGTTCCCCTGTCGGCGTGCCTGGCGAGGCTAGCGGCAGACGAAAC CCTACCTGACTACCGTAGCCCCGCGACTGGGAAGGCCGGGCCCGCCCTCA AGCACGTCCGCCTGGGGAACTTTCCCAGATATCTCTTGGTGCAGCTGCGC AGGTGCGAGAAGAACGGGGATGGGTGGTTGTGGTGTTGTTGTTGTTGTGG TGGTTTGCTTGGTTGACATGCGTACGTGTTGTTGCTTTCTTGACATTAAA ACCTTTCCGATCTCTCTACCCAGTACCTACCCTTCGCGAAGCTGCATCTT TTTCTTGGTTTTCCACGCGTAAGTCCTCCGGATCTTCAGAGGTCCCATGT GCTTGGAACCCCCCCTCCCCTGGTCCAGCGAGAACCCGGCGTGCTCCGTC CCGGATTTGTAGGGATGCAAGGTCAATGGTCTAACGACTACGGCATGCAC GGCTTAAGAGTTTTGTGTGTTTTCGTCCTTTTTATCATGGCGACAGTACT CCTATTTTTCGTGGTGAGATGTGTACCACACTCGTCAGTGTATGTAGACT ACTAAACTTTCAGTGTACTTTTTTCGTACAACTGCAACCATCAAGGGTCA CACAGTTCACGCTCAAATACCCGCCGGCATCGTTTGTGGGCCAGGTACTA CGTGGACACTGACTGGCAGCCGAAGAAGATGGACGTGGAGGTGGACGTCC CTCTCACTCTAGACCTCGAGTCACTGAGGTCAACGGGAATGCAGGTGGGC GCGAAAGCGATCTGGTGACTTGAGATAATACCCCCCCCCCCCCTCGATGG CACTATAAGTCAACCCATGACATATCTGGTTTGGCACAGCAAAACGCAAG GATGGCGACCAGCTCCTGGGTCGGATGGCTTCTTCAAAGGCCGTTATCTC TGCAGCACAATACAGCAGTGATGGCGTGGGAAATGATCCAATGATGGCGT TGGAAGCGTCTCGTCGAGAGCGTGCCGAGAAATGTGGCGTTTGATTTTGG CATCCTCTTTGAAGTTGTGTATTGGAGCTTTGACAGTGGTATGTCCACGG GGTGTGGTATCTTAAGTCATGTCGCCTACGGTTAGCACATCGCATGGACG AGCGCCGTGAGAGGTGTGTAGTCTGTGCTTTGTTGGCGGCTCAGATGTCC TGCCGAAACCAGGAACATAAATACTTCCCAAAACAAAAACAAAACCCACA CATATCCTTCATTTCCCACAAACCAAAACACAAAGTAATTTGCTCATGAA TACGGTTTCACAATAGGAAAAGTAGTTACGACCAAACGTCTGTAGACCGG ATATTGCACTGACCCTCGTACTGATTCTCACGGCAGAAGGATCCGAACGG TCAAAGGTGATGGGGCAAAACCAGTAATGTTGCTTTTGATATGCATGTGA ATCGGCTACATGTACACGTCGCTTTTTGTTTTACCGCAAGTTGCCGTGCA TCTGCCTTACACTGCTTGGTGCCCATCACAAATAAACCATGAAGGGGTGT CACGCAGTTTTCTGGTTTAGCCACAAACGGGGTCAGGTTGCATCATCGCG TGCGCGGCCTGGGTATCAAAGAAACGTTTGTCCACTGCGTTGCATTTTCT GTGGATATTCCTTGTCTCGTTGCCTGTCTTTATAAAATGCAGTGCATGTT TTTCAAAAAAACGTCCATCTATCATGTTGAATTGTATCTTGTGTCCGCGT TGCTTGTCGTGAATGGGTTTTCTGTGTTTGCGGTTGACAACGGCTTAGGC GGATGAGGTGCCTATGCCGGAGGGGGACGATGCGGTGCCCCCCGCGGCGG ACGACCCTGCTGCTGCTCCTGCTGCTGGTTCTGCTGGTTCTGGCGCTCAA GGTGAGAACCTGTTAACCGTTAAACAACATGCTCAAAGTGATGAATCTCT AACCTGAATTAAGTATGCTTTATTCTTTTTCTCAAGGTGAGAGCCTTTGG ATTTTGATTGAGCTATCCCGCTCAAGGTGATAACCTTTCAACCTTGTTTT GAGCATTTTTGCTGAAGGTTCTAAACCTTTTTTACCCTTGAGCATACCCC CCCTAGGCCGACTGTTGTTTCCTGTACCGGCACTTTCACGGCACAGCAGT CCTGTGTTCCCCAGATCCTCCCGCCGAAAAGAAAAAGAGAGCGGGAAAAC CCATGCGTGTGGTCTTCCTCCCTCTGTGTCACCCCGACTGATGCTCCGGG AAGAATCGCATGCATGTAAGGAAAGGTGCAGAAACACTGAAAAGGTGTCC AGAACGACCGAGGCAGCACGCACAAGCACGGGGTGTGTGATGACGGTGCC GTTTGTTTTTGCTCTCGACTCTCACGTTTGTTTTCACCCGTGTTCATGGA TGGACCTGCCATCGCTTTTCTAGAAGCCGCGCCGCTTGGTTGGTGCGCCA TTATGCCTGCCCTTGTTCATGTGGTGGATGCGGCGACGGTTTTACTCTGG CGACCATTCAGCCACTATAGCTGCCTTTTGTGTCTGGATTTCTTCGTCCT CTGCGTCTGCGGGCAGTGCCCTTCACCGCAATCTGGTGTTGTCGTCGTTG ACCGCTTTGAGGTCAGACCATGTTCGACACCTTGGACATTCTGCCGTAAT TTCTGTTGTGCTTTTTTTGTTCGCTTTTTTTTTTTCAGACTTTTTTCGCG AGGCTGACGACCTTGCCGCACAAAGCCAATCTTTCCTCTAAGTGCGCTGG CGTGTAGACTAGTGTGTCGTGCTTGACCATATTTGCGTGTTTCTTCGGTT CCGTTTTTACCCCGACATGCACGCACATCAGGAGGAGCGGTGGTCCCTGA TGCCGAGCTGGTGTCACAGCTGATGGCCATGGGGTTCCAGGAGAACGGGT GCAGAAGGGCGGCTGTGGCAGTCAACAACGCCTCTGCAGGTAAGTATGGA AACCTTGATCTTTTTTCTTTTTTTGGGTGGTTTTGCGGAAGTTGTTGTCT TACGTCTTCCCTCCGACTTTACAAAGGTACCGTAGTTGTGAGGGAGGTTT AGGATGGTGGGATGTTGGGTATGCTGTTCTTGCGGTATAGGTTCTGACGC AGCTGTCGGGGCATGTTGATTCTACGCTCGAAACTGTTGAATTTTAGACT GACAGTTACATCTATCCCCCACGTCGCAACAACCAGAGGTGGCGATGAAC TGGGTGCTGGAGCACATGGGCGACGCCGACTTCAATGACCCCCTCCCCGC ACCCGGCGCATCCACCGGGACCTCCGCCGCCGCCGCCAGCGGTGATGCGG CGCCAGACCCCGAAGCTTTGATGATGCTGGTCAGCCTGGGTTTCACGGAG AGGCAGGCGTCGGGAGCGTTGAAGGCTACGGGGGGGGACGCGGCCAGGGG AGCGGACTGGCTGTACAGCCACACAGACGACCTGGACAAGGCCGTTTCGG AGGCGAGCGAGCGAGCAGCTAGCGCCCTGTTTGTTTGATTTTTTTCACGA GGTTCCTTGGTATTGACGAGACTATCCGAATAGTCGTTATATTTCTCAAC AGTCACGATTATGTATCGATGACCGCCGCGCGCCGATTCACACGCGAGTT GCTGGGAACGGGTGGATAGCAAGGTAATGCCGTATTTTTTTTTCGTTGTC TTCATTCCGTCAGCGCTCACAACCTGTATATGCCTTTTACTCCAACCCGT GGTCACACAGGAGGGTTCCTCTGCCTGAGGCCCCCTACCCACCCCTCCTT CGTTGCTTTGCCTTCGATTTTAATGCGAGAAGAGTGCATTCTCTTCGCAC CGTGTTACACGGTCACCTTCTCCCTCTGCGTACACTCTGTATGCCTAGAC AGTTAGGTGTGGAATGTAAAAGTGTGCAGCGAGGATGTTATCAATACCCT CGCGAATGAGAGTAGAGACTAGTGTTAAGCTCACGCAAGTCTCCGCTGTT ATTGATGTTGTTGTTGTCGCCTTCGCGTAACAAACCGTTCCGGTCTCTGC TCGGTACCTTCTACTGTCCGTACTGGTCCAACTCACGTAGGCCCTTTCTG TGGTGCCAAGCCAGCGTAAAGAGGGTACACCTTTCTAGCAGTCAAACGTG ATGGTTTTGATTGATTGCGGCCAATTAGCTGTGCTCTGCGACGGTTCGAA TCGCACGCTCAATGTTCATGGCCTTACACCTCTCGCGCTCGCCTTGCACC TTTTTTCTCTCGGTGCCGCCGCTCAGCAACTCGACCCGAAGGCAGCTGCG GCTGGAGGAGAAGGGGGTGGTTCAGCTAGCGACGCTTCCATCGACGATGG TCCCGGAAGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12452:468..4877-

>mRNA_Ecto-sp13_S_contig12452.2036.1 ID=mRNA_Ecto-sp13_S_contig12452.2036.1|Name=mRNA_Ecto-sp13_S_contig12452.2036.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=993bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12452:468..4877- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGATCCCGGTGGAAGCAGCCGTCAACAAGACCGAGGTCGAGGCCTACAA
AGAACGCCTCAACAAGAGGCAGAAGTGCGACCCCAAGGCCAACACCACCA
CCACCGCCAACAACAACGAGGAGGAGGCGGAGGAGGAGGAGGAGATCAAG
CCGGTCGTTCCCCTGTCGGCGTGCCTGGCGAGGCTAGCGGCAGACGAAAC
CCTACCTGACTACCGTAGCCCCGCGACTGGGAAGGCCGGGCCCGCCCTCA
AGCACGTCCGCCTGGGGAACTTTCCCAGATATCTCTTGGTGCAGCTGCGC
AGGTACTACGTGGACACTGACTGGCAGCCGAAGAAGATGGACGTGGAGGT
GGACGTCCCTCTCACTCTAGACCTCGAGTCACTGAGGTCAACGGGAATGC
AGGCGGATGAGGTGCCTATGCCGGAGGGGGACGATGCGGTGCCCCCCGCG
GCGGACGACCCTGCTGCTGCTCCTGCTGCTGGTTCTGCTGGTTCTGGCGC
TCAAGGAGGAGCGGTGGTCCCTGATGCCGAGCTGGTGTCACAGCTGATGG
CCATGGGGTTCCAGGAGAACGGGTGCAGAAGGGCGGCTGTGGCAGTCAAC
AACGCCTCTGCAGAGGTGGCGATGAACTGGGTGCTGGAGCACATGGGCGA
CGCCGACTTCAATGACCCCCTCCCCGCACCCGGCGCATCCACCGGGACCT
CCGCCGCCGCCGCCAGCGGTGATGCGGCGCCAGACCCCGAAGCTTTGATG
ATGCTGGTCAGCCTGGGTTTCACGGAGAGGCAGGCGTCGGGAGCGTTGAA
GGCTACGGGGGGGGACGCGGCCAGGGGAGCGGACTGGCTGTACAGCCACA
CAGACGACCTGGACAAGGCCGTTTCGGAGGCGAGCGAGCGAGCAGCTAGC
GCCCTGTTTCAACTCGACCCGAAGGCAGCTGCGGCTGGAGGAGAAGGGGG
TGGTTCAGCTAGCGACGCTTCCATCGACGATGGTCCCGGAAGG
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