mRNA_Ecto-sp13_S_contig8856.20352.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8856.20352.1 vs. uniprot
Match: D7FNI1_ECTSI (Ferrochelatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNI1_ECTSI) HSP 1 Score: 464 bits (1195), Expect = 4.280e-152 Identity = 257/267 (96.25%), Postives = 258/267 (96.63%), Query Frame = 1
Query: 37 QVLFSAHGVPKSYIDAGDPYKAQIESCVKLISEKVDGINAEGGPGAKPGSSGAAAGGVTYHLSYQSRVGPVEWLQPYTDAKIHELADKGCKNLVVVPVSFVSEHIETLEEIDMEYREVAEEAGITNWRRVPALNTDPAFIEDMADMVVEALALPTLTVSEAFTRNNCDRKEAEGFLEKALDGMYGMPKTGGKPPKSGKVGGAGXXXXNAXXXXXXXXXXXXDGEASGDKREEAARVLSTLSGAAFAADGVGREIAGLFTATSDGIFF 837
QVLFSAHGVPKSYIDAGDPYKAQIESCVKLISEKVDGINAEGGPGAKPGSSGAAAGGVTYHLSYQSRVGPVEWLQPYTDAKIHELAD GCKNLVVVPVSFVSEHIETLEEIDMEYREVAEEAGITNWRRVPALNTDPAFIEDMADMVVEALALPTLTVSEAFTRNNCDRKEAEGFLEKALDGMYGMPKTGGKPPKSGKVGGA XXXX XXXXXXXXXXXX G DKR+EAARVLSTLSGAAFAADGVGREIAGLFTATSDGIFF
Sbjct: 320 QVLFSAHGVPKSYIDAGDPYKAQIESCVKLISEKVDGINAEGGPGAKPGSSGAAAGGVTYHLSYQSRVGPVEWLQPYTDAKIHELADNGCKNLVVVPVSFVSEHIETLEEIDMEYREVAEEAGITNWRRVPALNTDPAFIEDMADMVVEALALPTLTVSEAFTRNNCDRKEAEGFLEKALDGMYGMPKTGGKPPKSGKVGGAXXXXXXXXXXXXXXXXXXXXG----DKRKEAARVLSTLSGAAFAADGVGREIAGLFTATSDGIFF 582
BLAST of mRNA_Ecto-sp13_S_contig8856.20352.1 vs. uniprot
Match: A0A7S2FZ17_9STRA (Ferrochelatase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FZ17_9STRA) HSP 1 Score: 208 bits (530), Expect = 1.170e-56 Identity = 109/179 (60.89%), Postives = 131/179 (73.18%), Query Frame = 1
Query: 40 VLFSAHGVPKSYIDAGDPYKAQIESCVKLISEKVDGINAEGGPGAKPGSSGAAAGGVTYHLSYQSRVGPVEWLQPYTDAKIHELADKGCKNLVVVPVSFVSEHIETLEEIDMEYREVAEEAGITNWRRVPALNTDPAFIEDMADMVVEALALPTLTVSEAFTRNNCDRKEAEGFLEKAL 576
VLFSAHGVP+SYI+AGDPY+ QI+ CV+LI ++ G V HLSYQSRVGPVEWL+PYTD + +L G KNLVVVP+SFVSEHIETLEEID+EYRE+AEE GI+NWRR PALNTD AFIED+A++V +ALA PTL+VS A +NNC+ + EGF E L
Sbjct: 200 VLFSAHGVPQSYIEAGDPYQRQIQKCVELIGNELPGD-------------------VEVHLSYQSRVGPVEWLRPYTDTMLEDLGASGVKNLVVVPISFVSEHIETLEEIDIEYRELAEENGISNWRRCPALNTDSAFIEDLAEIVEDALAEPTLSVSAACIQNNCE-VDMEGFDEPQL 358
BLAST of mRNA_Ecto-sp13_S_contig8856.20352.1 vs. uniprot
Match: K0T559_THAOC (Ferrochelatase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T559_THAOC) HSP 1 Score: 202 bits (513), Expect = 2.650e-56 Identity = 107/172 (62.21%), Postives = 125/172 (72.67%), Query Frame = 1
Query: 40 VLFSAHGVPKSYIDAGDPYKAQIESCVKLISEKVDGINAEGGPGAKPGSSGAAAGGVTYHLSYQSRVGPVEWLQPYTDAKIHELADKGCKNLVVVPVSFVSEHIETLEEIDMEYREVAEEAGITNWRRVPALNTDPAFIEDMADMVVEALALPTLTVSEAFTRNNCDRKEAE 555
VLFSAHGVP SYI+AGDPYKAQIE CV+ I + P K G V HLS+QSRVGPVEWL+PYTD + EL ++G KNLVVVP+SFVSEHIETLEEID+EYRE+A E+GITNWRR PALNTDP FI+DMADMV +AL P+ +++EA NN E E
Sbjct: 49 VLFSAHGVPASYIEAGDPYKAQIEDCVERIKALL--------PSEKDG--------VKIHLSFQSRVGPVEWLRPYTDDVLPELGEQGVKNLVVVPISFVSEHIETLEEIDIEYRELALESGITNWRRSPALNTDPTFIDDMADMVADALNEPSQSITEACVANNVGNIELE 204
BLAST of mRNA_Ecto-sp13_S_contig8856.20352.1 vs. uniprot
Match: A0A7S2ULQ5_9STRA (Ferrochelatase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULQ5_9STRA) HSP 1 Score: 207 bits (526), Expect = 7.250e-55 Identity = 116/202 (57.43%), Postives = 139/202 (68.81%), Query Frame = 1
Query: 40 VLFSAHGVPKSYIDAGDPYKAQIESCVKLISEKVDGINAEGGPGAKPGSSGAAAGGVTYHLSYQSRVGPVEWLQPYTDAKIHELADKGCKNLVVVPVSFVSEHIETLEEIDMEYREVAEEAGITNWRRVPALNTDPAFIEDMADMVVEALALPTLTVSEAFTRNNCDRKEAEGFLEKALDGMYGMPKTGGKPPKSGKVGGAG 645
VLFSAHGVP+SYI+AGDPY++QI CV+ I + + G A GV HLSYQSRVGP+EWL+PYTD + L + G KNLVVVP+SFVSEHIETLEEID+EYRE+AEE+GITNWRR PALNTD AFI+DMADMV+EALA P +V+EA NNC ++ G L + M G+ TG VGG G
Sbjct: 298 VLFSAHGVPQSYIEAGDPYQSQIIDCVEKIKKTLPGD----------------AEGVEIHLSYQSRVGPIEWLRPYTDDVLPSLGESGVKNLVVVPISFVSEHIETLEEIDIEYRELAEESGITNWRRCPALNTDVAFIDDMADMVMEALAEPAQSVTEACVANNCG--DSGGAL--IDEQMLGISATG--------VGGVG 471
BLAST of mRNA_Ecto-sp13_S_contig8856.20352.1 vs. uniprot
Match: A0A7S2A1H9_TRICV (Ferrochelatase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A1H9_TRICV) HSP 1 Score: 204 bits (519), Expect = 1.270e-54 Identity = 106/170 (62.35%), Postives = 124/170 (72.94%), Query Frame = 1
Query: 40 VLFSAHGVPKSYIDAGDPYKAQIESCVKLISEKVDGINAEGGPGAKPGSSGAAAGGVTYHLSYQSRVGPVEWLQPYTDAKIHELADKGCKNLVVVPVSFVSEHIETLEEIDMEYREVAEEAGITNWRRVPALNTDPAFIEDMADMVVEALALPTLTVSEAFTRNNCDRKE 549
VLFSAHGVP+SYI+AGDPY+ QI CV+ I E++ + GV HLSYQSRVGP+EWL+PYTD + EL KG KNLVVVP+SFVSEHIETLEEID+EYRE+AEE+GI NWRR PALNTD AFI+DMADMV+EAL+ P TV+EA NN E
Sbjct: 291 VLFSAHGVPRSYIEAGDPYQRQIVECVEKIKERLP----------------SEEEGVQVHLSYQSRVGPIEWLRPYTDDVLPELGQKGVKNLVVVPISFVSEHIETLEEIDIEYRELAEESGIENWRRCPALNTDAAFIDDMADMVMEALSEPCQTVTEACVANNVGNVE 444
BLAST of mRNA_Ecto-sp13_S_contig8856.20352.1 vs. uniprot
Match: A0A7S1U6Q6_9STRA (Ferrochelatase n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6Q6_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.990e-54 Identity = 110/200 (55.00%), Postives = 137/200 (68.50%), Query Frame = 1
Query: 40 VLFSAHGVPKSYIDAGDPYKAQIESCVKLISEKVDGINAEGGPGAKPGSSGAAAGGVTYHLSYQSRVGPVEWLQPYTDAKIHELADKGCKNLVVVPVSFVSEHIETLEEIDMEYREVAEEAGITNWRRVPALNTDPAFIEDMADMVVEALALPTLTVSEAFTRNNCDRKEAEGFLEKALDGMYGMPKTGGKPPKSGKVGG 639
VLFSAHGVPKSY++AGDPY+AQIE CV+LIS G+ + VT HLS+QSRVGP+EWL+PYTD K+ EL G KNLV VP+SFVSEHIETLEE+DMEYREVAEEAGI WRR PALNTD F++DMA V+EAL P ++++EA NN + +E + + M G+ +G +SG+ GG
Sbjct: 315 VLFSAHGVPKSYVEAGDPYEAQIERCVELISA---GLPED----------------VTSHLSFQSRVGPIEWLRPYTDDKLRELGTGGVKNLVAVPISFVSEHIETLEEMDMEYREVAEEAGINGWRRAPALNTDQEFVDDMASAVIEALCSPAVSIAEACAANNVELEEKPLYQRYGMQNMPGVYDSG--DDRSGRSGG 493
BLAST of mRNA_Ecto-sp13_S_contig8856.20352.1 vs. uniprot
Match: A0A7S1BAA5_9STRA (Ferrochelatase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BAA5_9STRA) HSP 1 Score: 196 bits (498), Expect = 2.550e-54 Identity = 102/166 (61.45%), Postives = 121/166 (72.89%), Query Frame = 1
Query: 40 VLFSAHGVPKSYIDAGDPYKAQIESCVKLISEKVDGINAEGGPGAKPGSSGAAAGGVTYHLSYQSRVGPVEWLQPYTDAKIHELADK-GCKNLVVVPVSFVSEHIETLEEIDMEYREVAEEAGITNWRRVPALNTDPAFIEDMADMVVEALALPTLTVSEAFTRNN 534
VLFSAHGVP SYI AGDPY+ QI+ CV I + + VT HLSYQSRVGP+EWL+PYTD K+ EL ++ G KNLVVVP+SFVSEHIETLEE+DMEY+EVAEEAGITNW+R PALNT PAF+ DMAD++ E+L+ PT +VSEA NN
Sbjct: 9 VLFSAHGVPASYIAAGDPYQEQIQECVDAIGKTLPDD-------------------VTVHLSYQSRVGPIEWLRPYTDDKLVELGEEMGVKNLVVVPISFVSEHIETLEEMDMEYKEVAEEAGITNWKRCPALNTSPAFLSDMADLIAESLSGPTQSVSEACVANN 155
BLAST of mRNA_Ecto-sp13_S_contig8856.20352.1 vs. uniprot
Match: A0A7S4MD98_9STRA (Ferrochelatase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MD98_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.410e-53 Identity = 112/189 (59.26%), Postives = 130/189 (68.78%), Query Frame = 1
Query: 40 VLFSAHGVPKSYIDAGDPYKAQIESCVKLISEKVDGINAEGGPGAKPGSSGAAAGGVTYHLSYQSRVGPVEWLQPYTDAKIHELADKGCKNLVVVPVSFVSEHIETLEEIDMEYREVAEEAGITNWRRVPALNTDPAFIEDMADMVVEALALPTLTVSEAFTRNNCDRKEAEGFLEKALDGMYGMPKTG 606
VLFSAHGVP+SYI AGDPY+ QI CV+ ISE + P K G V HLSYQSRVGP+EWL+PYTD + EL G KNLVVVP+SFVSEHIETLEEID+EYRE+AEE+GI+NWRR PALNTD FI+DMADMV+EAL+ P TV+EA NN E K +D G+ TG
Sbjct: 275 VLFSAHGVPQSYIQAGDPYQKQIVDCVEKISELL--------PKEKDG--------VQVHLSYQSRVGPIEWLRPYTDDVLPELGQNGVKNLVVVPISFVSEHIETLEEIDIEYRELAEESGISNWRRCPALNTDKTFIDDMADMVLEALSEPVQTVTEACVANNVGNIEL-----KEIDERMGISVTG 442
BLAST of mRNA_Ecto-sp13_S_contig8856.20352.1 vs. uniprot
Match: A0A7S2Q4U7_9STRA (Ferrochelatase n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q4U7_9STRA) HSP 1 Score: 202 bits (515), Expect = 2.040e-53 Identity = 105/172 (61.05%), Postives = 124/172 (72.09%), Query Frame = 1
Query: 40 VLFSAHGVPKSYIDAGDPYKAQIESCVKLISEKVDGINAEGGPGAKPGSSGAAAGGVTYHLSYQSRVGPVEWLQPYTDAKIHELADKGCKNLVVVPVSFVSEHIETLEEIDMEYREVAEEAGITNWRRVPALNTDPAFIEDMADMVVEALALPTLTVSEAFTRNNCDRKEAE 555
VLFSAHGVP SYI+AGDPYKAQIE CV+ I + + GV HLS+QSRVGPVEWL+PYTD + L ++G KNLVVVP+SFVSEHIETLEEID+EYRE+A E+GITNWRR PALNTDP FI+DMADMV +AL+ P+ T++EA NN E E
Sbjct: 290 VLFSAHGVPASYIEAGDPYKAQIEDCVERIKALLP----------------SEEDGVKVHLSFQSRVGPVEWLRPYTDDVLPSLGEQGVKNLVVVPISFVSEHIETLEEIDIEYRELALESGITNWRRSPALNTDPTFIDDMADMVADALSEPSQTITEACVANNVGNLELE 445
BLAST of mRNA_Ecto-sp13_S_contig8856.20352.1 vs. uniprot
Match: A0A835Z157_9STRA (Ferrochelatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z157_9STRA) HSP 1 Score: 200 bits (509), Expect = 2.180e-53 Identity = 103/167 (61.68%), Postives = 125/167 (74.85%), Query Frame = 1
Query: 40 VLFSAHGVPKSYIDAGDPYKAQIESCVKLISEKVDGINAEGGPGAKPGSSGAAAGGVTYHLSYQSRVGPVEWLQPYTDAKIHELADKGCKNLVVVPVSFVSEHIETLEEIDMEYREVAEEAGITNWRRVPALNTDPAFIEDMADMVVEALALPTLTVSEAFTRNNCD 540
VLFSAHGVP+SYI+AGDPYK IE CV LI ++ A GV LSYQSRVGP+EWL+PYT+ K+ EL G KNLVVVP+SFVSEHIETLEEID+EYRE+AEE GI +WRRVPALNTDPAF+EDMAD+ ++AL P++++SEA ++NN D
Sbjct: 234 VLFSAHGVPQSYIEAGDPYKGHIEECVGLIRKEY------------------ADCGVKTELSYQSRVGPIEWLRPYTEDKVVELGKAGVKNLVVVPISFVSEHIETLEEIDIEYRELAEENGIEHWRRVPALNTDPAFLEDMADLCLQALQEPSVSLSEACSQNNVD 382 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8856.20352.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8856.20352.1 >prot_Ecto-sp13_S_contig8856.20352.1 ID=prot_Ecto-sp13_S_contig8856.20352.1|Name=mRNA_Ecto-sp13_S_contig8856.20352.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=156bp MEYREVAEEAGITNWRRVPALNTDPAFIEDMADMVVEALALPTLTVSEAFback to top mRNA from alignment at Ecto-sp13_S_contig8856:73..3666+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8856.20352.1 ID=mRNA_Ecto-sp13_S_contig8856.20352.1|Name=mRNA_Ecto-sp13_S_contig8856.20352.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3594bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8856:73..3666+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8856:73..3666+ >mRNA_Ecto-sp13_S_contig8856.20352.1 ID=mRNA_Ecto-sp13_S_contig8856.20352.1|Name=mRNA_Ecto-sp13_S_contig8856.20352.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=468bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8856:73..3666+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |