mRNA_Ecto-sp13_S_contig8853.20346.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8853.20346.1
Unique NamemRNA_Ecto-sp13_S_contig8853.20346.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8853.20346.1 vs. uniprot
Match: A0A6H5L4R0_9PHAE (RNase H type-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4R0_9PHAE)

HSP 1 Score: 662 bits (1708), Expect = 7.130e-231
Identity = 396/408 (97.06%), Postives = 397/408 (97.30%), Query Frame = 1 
Query:   85 MVKKVPACYGIRKGRGAPVVVHSWAEVVAKTNGFPGADFRKFKTPEEATDYANLVDEGGGLNPAPAGWSTLWFDGGCRGNPGPSGAGAVIFNDSEKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKSMDEIYDPSTGVVNTAPNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXIVPTLPGIGGSAGTTVASTSAAPAPVTLPPPSLKPLSILPGATDAYPHAPASAASASAVPRSIEEAXXXXXXXXXXXXXXXXXXDARASIAAGGGVTSTSGLKVPDGQAARAMWASLATGSLAESSPPRFLVHLASWRKTGADLGAVAAIVQEEGMFKRLT 1308
            MVKK+PACYGIRKGRGAPVVVHSWAEVVAKTNGFPGADFRKFKTPEEATDYANLVDEGGGLNPAPAGWSTLWFDGGCRGNPGPSGAGAVIFNDSEKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKSMDEIYDPSTGVVNTAPNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXIVPTLPGIGGSAGTTVASTSAAPAPVTLPPPSLK  SILPGATDAYP  PASAAS SAVPRSIEEA  XXXXXXXXXXXXXXXXDARASIAAGGGVTSTSGLKVPDGQAARAMWASLATGSL ESSPPRFLVHLASWRKT  DLGAVAAIVQEE MFKRLT
Sbjct:    1 MVKKLPACYGIRKGRGAPVVVHSWAEVVAKTNGFPGADFRKFKTPEEATDYANLVDEGGGLNPAPAGWSTLWFDGGCRGNPGPSGAGAVIFNDSEKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKSMDEIYDPSTGVVNTAPNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXIVPTLPGIGGSAGTTVASTSAAPAPVTLPPPSLKXPSILPGATDAYPPPPASAASVSAVPRSIEEAREXXXXXXXXXXXXXXXXDARASIAAGGGVTSTSGLKVPDGQAARAMWASLATGSLTESSPPRFLVHLASWRKTETDLGAVAAIVQEERMFKRLT 408
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BLAST of mRNA_Ecto-sp13_S_contig8853.20346.1 vs. uniprot
Match: D7FZY9_ECTSI (Ribonuclease H n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY9_ECTSI)

HSP 1 Score: 590 bits (1521), Expect = 4.590e-207
Identity = 359/392 (91.58%), Postives = 360/392 (91.84%), Query Frame = 1 
Query:  163 VVAKTNGFPGADFRKFKTPEEATDYANLVDEGGGLNPAPAGWSTLWFDGGCRGNPGPSGAGAVIFNDSEKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKSMDEIYDPSTGVVNTAPNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXIVPT----------LPGIGGSAGTTVASTSAAPAPVTLPPPSLKPLSILPGATDAYPHAPASAASASAVPRSIEEAXXXXXXXXXXXXXXXXXXDARASIAAGGGVTSTSGLKVPDGQAARAMWASLATGSLAESSPPRFLVHLASWRKTGADLGAVAAIVQEEGMFKRLT 1308
            +V  TNGFPGADFRKFKTPEEATDYANLVDEGGGLNPAPAGWSTLWFDGGCRGNPGPSGAGAVIFNDSEKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKSMDEIYDPSTGVVNTAPNAA XXXXXXXXXXXXXXXXXXXX   XXX              LPGIGGSAGTTVASTSAAPAPVTLPP SLKP SILPGATDAYP  P SAASASAVPRSIEEA     XXXXXXXXXXXXXDARASIAAGGGVTSTSGLKVPDGQAARAMWASLATGSLAESSPPRFLVHLASWRKT  DLGAVAAIVQEEGMFKRLT
Sbjct:    4 LVRLTNGFPGADFRKFKTPEEATDYANLVDEGGGLNPAPAGWSTLWFDGGCRGNPGPSGAGAVIFNDSEKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKSMDEIYDPSTGVVNTAPNAAAXXXXXXXXXXXXXXXXXXXXPAAXXXXXXXXXXXXXXXXXLPGIGGSAGTTVASTSAAPAPVTLPPASLKPPSILPGATDAYPPPPVSAASASAVPRSIEEAREVAAXXXXXXXXXXXXXDARASIAAGGGVTSTSGLKVPDGQAARAMWASLATGSLAESSPPRFLVHLASWRKTETDLGAVAAIVQEEGMFKRLT 395
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BLAST of mRNA_Ecto-sp13_S_contig8853.20346.1 vs. uniprot
Match: A0A6U1LVX6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LVX6_9STRA)

HSP 1 Score: 134 bits (337), Expect = 4.740e-33
Identity = 91/235 (38.72%), Postives = 118/235 (50.21%), Query Frame = 1 
Query:  109 YGIRKGRGAPVVVHSWAEVVAKTNGFPGADFRKFKTPEEATDYANLVDEGGGLNPAPA-------------GW---------------------------STLWFDGGCRGNPGPSGAGAVIF-NDS-EKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKS 687
            Y I  GR  P +V +W E   +  GF GA F+ F    EA  +  +      L  +P               W                             ++FDG  RGNPG  GAGAVI+ +DS E +L+ GY+YLGE  TNNEAEY + +LGL+AAA   I  L V GDSMLVI Q  GKW+V+A  L+ LH  A ++++      +  HVPR+ N  AD LAN A+DSKS
Sbjct:    7 YAIANGRNGPKIVRTWKECSQEVQGFSGAVFKGFSEQAEAETFLLMYGVSADLQESPGEENKSSQRPNLAKAWVEQHGGARDPLEDEMEEKAPEKPAQDRPVMFFDGASRGNPGEGGAGAVIYTSDSFENQLWRGYRYLGEC-TNNEAEYTAFLLGLQAAADAGIQNLKVCGDSMLVINQATGKWKVNAENLMPLHENAKKLIRTMP-GLSLRHVPREENTVADGLANQALDSKS 239
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BLAST of mRNA_Ecto-sp13_S_contig8853.20346.1 vs. uniprot
Match: A0A535LZB1_9CHLR (Ribonuclease HI family protein n=3 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535LZB1_9CHLR)

HSP 1 Score: 116 bits (290), Expect = 4.500e-27
Identity = 64/130 (49.23%), Postives = 87/130 (66.92%), Query Frame = 1 
Query:  295 LWFDGGCRGNPGPSGAGAVIFNDSEKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSK 684
            L  DGG RGNPGP+  G VI +D  ++L + +K+LG   TNN+AEY+++I GLKA        L V  DS LV++Q+ GKW+V  P+L GLHRQA++++KQ   K T  HV R+ N RAD L N+A+D K
Sbjct:   41 LRADGGARGNPGPAALGVVIEDDQGEKLRTFHKWLGVA-TNNQAEYQALIEGLKAMKDWEFDHLDVYMDSKLVVEQVNGKWKVKEPELQGLHRQATDLLKQFGDKVTVQHVAREENRRADKLVNMAIDEK 169
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BLAST of mRNA_Ecto-sp13_S_contig8853.20346.1 vs. uniprot
Match: A0A7S2KCF7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF7_9STRA)

HSP 1 Score: 115 bits (288), Expect = 4.970e-27
Identity = 60/143 (41.96%), Postives = 88/143 (61.54%), Query Frame = 1 
Query:  265 LNPAPAGWSTLWFDGGCRGNPGPSGAGAVIFNDSEKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKSMD 693
            LN +P     L FDGG RGNPG +GAG V++++   E++ G  YLGE  TNNEAEY  ++ GLK A  + ++ +VV+GDS L+++Q+ GK++  + KL+        ++K         H+PR+ N RAD LAN AMD +  D
Sbjct:    3 LNVSPYRTYVLQFDGGSRGNPGTAGAGMVLYDEVGHEVWHGRHYLGEHSTNNEAEYTGLLAGLKCARAIGVSNIVVQGDSELIVKQLQGKYKCKSSKLIPYFTSVKSLIKGFN-SFEVRHIPREQNFRADELANEAMDWREND 144
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BLAST of mRNA_Ecto-sp13_S_contig8853.20346.1 vs. uniprot
Match: A0A2G6F7E9_9BACT (RNase H type-1 domain-containing protein n=1 Tax=bacterium DOLZORAL124_38_8 TaxID=2044884 RepID=A0A2G6F7E9_9BACT)

HSP 1 Score: 115 bits (287), Expect = 5.820e-27
Identity = 71/148 (47.97%), Postives = 91/148 (61.49%), Query Frame = 1 
Query:  235 YANLVDEGGGLNPAPAGWSTLWFDGGCRGNPGPSGAGAVIFNDSEKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMD 678
            +AN+ D        P     L  DGG RGNPG SGAGAVI+N  ++ L+ G KY G   TNN AEY  +ILGL+ A KL IT L V  DS L I+QM G W+V  P++  L +QA E+  Q+ L+ ++ H+PR  N +AD LAN AMD
Sbjct:    4 FANIDDR---FKEKPKKTGFLCADGGSRGNPGVSGAGAVIYNQDKEILWQGGKYTGIN-TNNFAEYHGLILGLQQAQKLEITHLQVFLDSKLAIEQMNGNWKVKHPQIKILFQQAKELA-QNFLEISFTHIPRAKNKKADELANRAMD 146
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BLAST of mRNA_Ecto-sp13_S_contig8853.20346.1 vs. uniprot
Match: A0A481ZGX4_9VIRU (Ribonuclease H n=1 Tax=Pithovirus LCPAC406 TaxID=2506599 RepID=A0A481ZGX4_9VIRU)

HSP 1 Score: 114 bits (285), Expect = 6.310e-27
Identity = 66/130 (50.77%), Postives = 89/130 (68.46%), Query Frame = 1 
Query:  292 TLWFDGGCRGNPGPSGAGAVIF--NDSEKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAM 675
            TL+FDG  +GNPGPSG G VI   +D +KELY G ++LG   TNN AEY+++I GLK A K +ITQLVVKGDS L+I+Q+  +W+  A  L  L ++  ++VKQ   K T+  +PR  N RAD L N+A+
Sbjct:    3 TLYFDGCSKGNPGPSGTGYVIIYDDDDDKELYFGMEFLGHA-TNNVAEYKALIFGLKDAQKNNITQLVVKGDSKLIIKQVSLQWKCKAEHLKPLLKECLQLVKQIG-KVTFEWIPRSENKRADNLCNLAL 130
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BLAST of mRNA_Ecto-sp13_S_contig8853.20346.1 vs. uniprot
Match: A0A4D9D7L8_9STRA (RNase H type-1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7L8_9STRA)

HSP 1 Score: 115 bits (289), Expect = 5.670e-25
Identity = 60/130 (46.15%), Postives = 86/130 (66.15%), Query Frame = 1 
Query:  295 LWFDGGCRGNPGPSGAGAVIFNDSEKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSK 684
            L+FDGG RGNPG SG GAV+F+   K+L++   +LG  KTNN+AEY ++  GL+ AA+  +  L  +GDS+LVI+QM G W+V    ++ LH Q   + ++ +   T+ HVPR  N  AD LAN+AMD +
Sbjct:  252 LFFDGGARGNPGVSGGGAVMFDCDNKQLWTLSVFLGSDKTNNQAEYLALYHGLEEAARRGVRTLHARGDSLLVIRQMEGVWKVKNKAIMRLHAQVKALARRFRA-LTFQHVPRAENTVADALANVAMDKR 380
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BLAST of mRNA_Ecto-sp13_S_contig8853.20346.1 vs. uniprot
Match: A0A481ZBR2_9VIRU (Ribonuclease H n=1 Tax=Pithovirus LCPAC401 TaxID=2506595 RepID=A0A481ZBR2_9VIRU)

HSP 1 Score: 109 bits (272), Expect = 9.110e-25
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1 
Query:  292 TLWFDGGCRGNPGPSGAGAVIFNDSEKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAM 675
            TL+FDG  +GNPGP+GAG VI ND  +E+ SG K+LG   TNN AEY+++I GLK A   +IT L VKGDS L+I+Q+  +W+  +  L  L ++  E VK      T+  +PR  N RAD+L N+A+
Sbjct:   30 TLYFDGCSKGNPGPAGAGYVIVNDEGEEMMSGRKFLGNA-TNNIAEYKALIFGLKNAVSNNITNLNVKGDSKLIIEQVTLRWKCKSENLKPLLKKCLEYVKLFD-DVTFEWIPRDENKRADILCNLAL 155
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BLAST of mRNA_Ecto-sp13_S_contig8853.20346.1 vs. uniprot
Match: A0A6C0CSI6_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CSI6_9ZZZZ)

HSP 1 Score: 109 bits (272), Expect = 9.630e-25
Identity = 68/131 (51.91%), Postives = 85/131 (64.89%), Query Frame = 1 
Query:  292 TLWFDGGCRGNPGPSGAGAVIFNDSEKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQ-HQLKC-TWHHVPRKLNVRADLLANIAMD 678
            TL FDGG RGNPG +GAG VI+ D  +E+YSG   LG   TNN AEY+ + LGL  A K  I  L++KGDS+LV+ Q+  KW+V   K + L  Q + V K  +QL+  T  HV RK N RAD LAN+AMD
Sbjct:   27 TLMFDGGSRGNPGTAGAGFVIYKDM-REIYSGCAPLGHA-TNNYAEYKGLELGLTCAIKKGIESLIIKGDSLLVLNQITNKWKV---KSISLKEQYTNVKKLLNQLRSYTVEHVKRKYNKRADELANMAMD 152
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8853.20346.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4R0_9PHAE7.130e-23197.06RNase H type-1 domain-containing protein n=1 Tax=E... [more]
D7FZY9_ECTSI4.590e-20791.58Ribonuclease H n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6U1LVX6_9STRA4.740e-3338.72Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A535LZB1_9CHLR4.500e-2749.23Ribonuclease HI family protein n=3 Tax=Chloroflexi... [more]
A0A7S2KCF7_9STRA4.970e-2741.96Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A2G6F7E9_9BACT5.820e-2747.97RNase H type-1 domain-containing protein n=1 Tax=b... [more]
A0A481ZGX4_9VIRU6.310e-2750.77Ribonuclease H n=1 Tax=Pithovirus LCPAC406 TaxID=2... [more]
A0A4D9D7L8_9STRA5.670e-2546.15RNase H type-1 domain-containing protein n=2 Tax=M... [more]
A0A481ZBR2_9VIRU9.110e-2547.66Ribonuclease H n=1 Tax=Pithovirus LCPAC401 TaxID=2... [more]
A0A6C0CSI6_9ZZZZ9.630e-2551.91RNase H type-1 domain-containing protein n=1 Tax=v... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8853contigEcto-sp13_S_contig8853:494..6082 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score596.3
Seed ortholog evalue1.2e-167
Seed eggNOG ortholog2880.D7FZY9
Model size1308
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.RNase H
EggNOG OGs2S89Z@2759,COG0328@1
Ec32 ortholog descriptionRibonuclease H1, N-terminal
Ec32 orthologEc-22_003570.1
Cds size1308
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464157.479529-CDS-Ecto-sp13_S_contig8853:493..12251681464157.479529-CDS-Ecto-sp13_S_contig8853:493..1225Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8853 494..1225 -
1681464157.503709-CDS-Ecto-sp13_S_contig8853:1848..19021681464157.503709-CDS-Ecto-sp13_S_contig8853:1848..1902Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8853 1849..1902 -
1681464157.5172765-CDS-Ecto-sp13_S_contig8853:3120..32591681464157.5172765-CDS-Ecto-sp13_S_contig8853:3120..3259Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8853 3121..3259 -
1681464157.5320606-CDS-Ecto-sp13_S_contig8853:3449..36581681464157.5320606-CDS-Ecto-sp13_S_contig8853:3449..3658Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8853 3450..3658 -
1681464157.5507166-CDS-Ecto-sp13_S_contig8853:5908..60821681464157.5507166-CDS-Ecto-sp13_S_contig8853:5908..6082Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8853 5909..6082 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8853.20346.1prot_Ecto-sp13_S_contig8853.20346.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8853 494..6082 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8853.20346.1

>prot_Ecto-sp13_S_contig8853.20346.1 ID=prot_Ecto-sp13_S_contig8853.20346.1|Name=mRNA_Ecto-sp13_S_contig8853.20346.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=436bp
MRAHSRQAEHTSLSSPAIYLHARRWLRTMVKKVPACYGIRKGRGAPVVVH
SWAEVVAKTNGFPGADFRKFKTPEEATDYANLVDEGGGLNPAPAGWSTLW
FDGGCRGNPGPSGAGAVIFNDSEKELYSGYKYLGEGKTNNEAEYESVILG
LKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQH
QLKCTWHHVPRKLNVRADLLANIAMDSKSMDEIYDPSTGVVNTAPNAAAA
AAAAAAAAAAAAAAAAASAPAALPGIVPTLPGIGGSAGTTVASTSAAPAP
VTLPPPSLKPLSILPGATDAYPHAPASAASASAVPRSIEEAREVAAVAAA
TAAYAAVAADARASIAAGGGVTSTSGLKVPDGQAARAMWASLATGSLAES
SPPRFLVHLASWRKTGADLGAVAAIVQEEGMFKRLT
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mRNA from alignment at Ecto-sp13_S_contig8853:494..6082-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8853.20346.1 ID=mRNA_Ecto-sp13_S_contig8853.20346.1|Name=mRNA_Ecto-sp13_S_contig8853.20346.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5589bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8853:494..6082- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGAGCACACAGCCGGCAAGCAGAGCACACGTCTCTCTCGTCCCCAGC
TATATATCTCCACGCGCGGCGTTGGCTAAGGACCATGGTGAAGAAGGTGC
CGGCGTGCTACGGCATTCGGAAGGGGCGAGGTGCCCCTGTCGTGGTGCAC
TCGTGGGCGGAGGTGGTTGCCAAAGTGAGCGACCGCGCGCGTTTGAGTTT
TTTCGCCAGGGTCCTCCCCCCCACGAGACTCGTGTTTTGTTTTTCGCGGG
GCAGGAGGGGGGGGAGGTGGTGGTACGGGAGCTAGAGAGTCCGGGGGGGG
GGGCGCCGCGGCGCTAAGGATTCGTACGCGTTTGAAATCTGCCTTGATGT
AGCCATCTCTCTCGCAGGCAATGCGTGTGTCTGTCTCTCGTTTATGCCCG
TACGTGCTCACGGGGCGTTCGTCTGTCACTGCTGGTGCAAAAAGGAAGTT
TATTCTATGTAATGCCGAGAAGAGCCATATGCATCGCAGATTGCCCATAT
ACGACGATGCCTGCTTCCCGTTTGGGGAGATCGTGCGAACTGACTCATAG
CAATCATCCTCAGGATTGCTGTACGTCCAGCTCGCTATACAGCAGTGCAT
CGAGACGGGGTGCGGCTTCGGTCATTTCTCTTTCCCGCGGTTGTCCCTAT
ACCCGAGTCGGCCAACTCAAAGATGGAAACAAAACAATCTGCAGATGGAT
GACTTGATGACTTGAAAATAGCACTGCTTTTTTCAAAATTTGCCCTCATT
TGGGGCAATTTGGCGTCCTCGTCAGTTGGACCAGCACCCACATCTTAGGC
TGAAGTACGTAGGCGCGGGGACCCGAACGGTTTTTAATGTGAAGACGACA
ACAACAAAATAACAACAATAACGACACTATCCACTGCTGTCGTCTGGTAT
TTTGAACGTATTTTCTCAAGGTTGTTGTGACGGCGATACAAACTGACCGC
CGTCGGCGATCTACATATATTAAGGAGAAATAAATACACGCACAGAGAGA
CTACCCATTCGAGATATACCCACAGTCGAACGGGATGTGGTGGAGTCTTT
TCAGTAAGTGGTATGTTTTATCCACATGAGAGCGACGATATTTCATTTTG
CTTTTTGCAACAGCTGGCTGCAGTTTCAAATGTACCTGCTGCTGTAGCTA
GATGTGCGGCACGGCAACCTATCGTATCACGGATTTGCAGCAGCTATAGT
CTACATAGGTGTGTGAAGGCAAGCTGCTACACTGGGGGATCGACCAGGCA
GGTATTCGGTAGCAGAGCACGCAAGACCGGATGTTGGACCAACATGGTGT
TGTGACAAGTACAGGTCGTGTGTGGGACAACACTGGAAAATTGGTACCAT
CCGATACCCCCGTTGCTCAGACTCGCGCTCGTGTGGATGCACTACAAGTA
CATACGAACCCTCAACTGTATTCGACTAAAAATCCTCTTCTCTCAACATT
TTCGTACCCCTGAAAGGCATCACATATCTTCCGTAGGGGGGTTGACCAAC
GCGAAAGGACTGCTGTACGCGGAATTACTATTTCATAGATTCGGGATAAT
CACATGCTTTATTTGCACCCCCGCCTTCGGCGACAGTCCGCGAAGGGGGT
CGGGTCTCTCTGGCACAGCAGTAGTTGCGGCCCGCCGTTAAGAAAAATCA
AGTGAAAAAGAAAAAAACTCAAATGCTCACGAAAAACAAGAGAAGTGACC
AAGACAAAGATACACACCTCAGCCGTGGATCCTACACTAATCTCTATACA
ATGAACAACCATGCTCGACGGTGGTGATAACGAAATATGAAATTGAGCCT
CGACCCCAAGTGGACTCGGCTTATTCGCGGGCCGCAACTGCTGTATGTGG
AATGGATACCCTCGCCGTCAAGACTTTGTACCACCGTTGTTTCCGATGCG
GGGCACAAGCCAAAGCCCCCGGCTGCCCGAGCTGGATACACAGCAACGAC
TTCGAGTTGGTTCCGTGCTGCACCCCATGCCTTACCTTGTTCGCTTGGCA
ACATGATGATCTACACCATCTGCTTGATTTTGTTTACAGAAATGCAAAAG
CTCGTTGAGTGGAATTCCTCGTGTGTGACCCTGGGTGACCCGTCTAAAAA
TATCCCGCAAGCAGACTGACGGTTCACAAAAAGTGAGGCAGCACACACGT
TCTCCTTTAAGCACCCCAACCTCAAACACGCACAGAGAGAGACAGAGAAA
GAGAAAGAGAGATAGAGACACACAGACAGACAGACAGACAGAGAGAGGGC
CCTCCGCGTGCCGAACGATTGACCGCCCCTTCTAGTAGCAAGGAACGAGC
GGCCTTCGGTGATCGGTCTTGTGGGAACAATGCTCTGTCCTCTCGAGGAC
GTGTGGTCAATGGTCCAACCACTAGGGCATGCAAAACATAAGAGTACGCC
TCCCTCCCCCCCCCTCGAAAATAGACGAACGGCTTCCCGGGCGCCGACTT
CAGGAAATTCAAGACGCCGGAGGAAGCTACGGATTACGCCAACCTGGTCG
ATGAGGGCGGGGGGCTTAACCCCGCTCCGGCGGGATGGTCGACCCTGTGG
TTCGATGGCGGCTGTCGAGGCAATCCCGGCCCGTCTGGGGCGGGCGCGGT
TATCTTTAACGACAGCGAGAAGGAGCTATACAGGTGGGGTTGGTAGGGTT
ATGTTGCTGTGATTTTTTGGGGGAGGGAACGCTAGTGGTTGTACGAGGGG
GGGGTTGCTGCTGCTGATGGTTTGTCTGAGGAGGTTAACAGGCGAACGAC
ATATCTCGTCGCGCTAACGGTGGAATTGCTACCCCATCGCCCCTTTCGGC
GTACTGTTGTTGTTGTTCTCCAGCGGGTATAAGTACCTGGGCGAAGGGAA
GACCAACAACGAAGCTGAGTATGAGAGCGTCATCCTCGGACTCAAAGCCG
CCGCTAAGCTTAGCATCACGCAACTCGTGGTCAAGGGCGATTCTATGCTG
GTTATTCAGCAGGTAAAAAATACTGAAACTTTCTTTTTTTCTGTTGGGGT
GAGCTGTTGAGGATGGTCCATTGTATTTCCGTTCTATGATTTATAGAAAG
GCGTTTCGGTACCGTGTACGACATGACACAAGATAACACAACCCTTGGAC
GGATTTCCAAAGCTCGATTACTCCACGACTACATATAAGAGGACGCATAA
ACGAAACCATACGTTTTCGGAGAGCTTTCGACGAGACGGCTTCAGCACCG
CCGTTTTCGGCGCTGTGGCTCGTGCTGCTGTTGATAGATCGAGCTCTGAA
AATCCATCCAGGGGGTGTGTCATCGTGTGTCGTATACGGTAGTTGGCTTT
TGTCATGGAAGGCGTCCGCGTCGGTTGGACATACACGGGTATGTGAGGAT
ACTGAACGGGGACCGTAGTACGGGCATTAGAAGGTACTGAGCGGAGGCCG
GAACGGTTTTTAATGTGACGACAACAACAATTCACGGAAAGAGCGCTCAA
CAATCACATCACCAAAATTTTCATGTTTTTTTTTTAATCGTTTGGTGGTG
ATCTGATGGTTGAGTAGGACCGGCTTCGTGCAGGAAGTGGATAGAGGTTG
GAACGGCCATCCAACGGCTAGCACAACGAGAACATGTGCATCGCCCTCTT
TCACGCGCGACCGTCGCCAACGATGACCCGCGGGCGTTTTTGTTTAATTC
ATTTGCTTGTGTGGAGGGTACTTGCTCGACTGTTCCGGTAGAGGTCCGTC
CGACTTTTTCACCTTTGCCTCTCCCCTGGTGTCTCAATTGAGGCACACAT
ACTCCGCGACGTAGATTGATCAAATGCCACGGGAGCAGCCCGCTTTCGTC
CCTCTAAGCGGTTGTTCATGCCAGATTAAGCACAACTTTTCTAGAAAATG
CTGATCCGTTCCATGCACCATCTAAGCCTGTGTGCCTCCAAGTGATGGCC
ATGTAGCCCGTGTGTTTCCAAGTTCAGGGGTCACGCGGAAGCGAACCACA
CGGACGGGCGGCGGGGGTTGCTTTGTCTTCAGGATGGCGATCGTTGTTGA
GAGCCGTGCGTGCTTTCGGGTTCCTGTTGGCCCAAACGGCTATCGCCTTC
GTTCCGCAGCCTGCGCGCCTGGTGCATGTGCACGAGATTCGTGAGTTTGA
CTTGACACGTAAAAAAAACATACATGTACATCAAATAACATCGCGCCTTT
TCCACGCTGGATTCCACTTTCTTGCTGCAGATGATGGGGAAGTGGCGGGT
GTCGGCACCGAAGCTAGTTGGACTTCACCGCCAGGTAAACCTTAGCCTTA
GCCTTAGCCTTAGCCTTATCCTTGCCACCGCGACATCGCTGATCCACACA
CGTTGACGCTCGAACGGTTCCCTCCGATGAAAACGAGAGAAAATATATGT
ACAATCTCAGCCGTTTCGGGAGAGCGGTAGCGAGGAACGGTGTTTCTCCT
CGCCATCGTGTTTGCTGTGAGTGGTCTCCATGCCCCATTTGTACGTTGTG
GACTGATTTCCCGTACCGAAAGCCGGTTAACCGTATCACCGACTGGTACA
ATCAGCAAGAAATGCCATGTGCTCCGTGCGACAATGGTGGTGGCACTGTG
TCGTTGCTCCTACCGGTTTTTTTTTGGCCGGGAATGCTGAGCTTGACGCT
CTCTCCCTGGCACCTCATTCGTGACTGGAGGCATTCCGTAAAAACATGTG
GTATCCCAAAAAAGGTCCATCCGCCCCAACTCCCGCCTCTCCCATAGCCC
CTTTTCTTGCTGGGTGGGATTCCGTAAATAATGTGGTATCCCATAGAGGT
CCAACTACCCATCTTCCGCCTCTCGCGTTTCCCTTCTCCCTGGTGTCATT
CCGTATAATGATGTGGTACTCCACCACCCCACGTTCCGTGTGTCCTTTCC
CCGCCAGGCATCCGAGGTAGTAAAGCAGCACCAGCTCAAGTGCACCTGGC
ACCACGTGCCCCGCAAGCTCAACGTCCGCGCGGACCTTCTGGCGAACATC
GCCATGGACAGCAAGTCGATGGACGAGATCTACGACCCTTCCACGGGGGT
CGTCAACACCGCCCCCAACGCGGCGGCCGCGGCAGCCGCAGCCGCAGCCG
CAGCCGCCGCTGCCGCCGCAGCCGCTGCCGCTTCCGCCCCTGCCGCGCTG
CCGGGCATCGTCCCCACCCTGCCGGGCATCGGGGGCTCGGCTGGTACGAC
CGTGGCGTCCACTTCGGCCGCACCGGCGCCGGTGACCCTCCCGCCGCCGT
CGCTGAAGCCCCTTTCCATCCTCCCGGGCGCTACCGACGCCTACCCTCAC
GCCCCGGCCTCGGCCGCCTCGGCATCTGCTGTGCCCCGGTCCATCGAAGA
GGCTCGCGAGGTGGCCGCGGTCGCCGCTGCCACCGCTGCCTATGCGGCCG
TTGCCGCGGACGCCCGCGCCTCGATCGCGGCCGGCGGCGGCGTGACGAGC
ACGTCCGGCCTCAAGGTGCCCGACGGGCAGGCTGCCAGGGCGATGTGGGC
GTCGCTTGCCACCGGTAGCCTGGCCGAGTCCTCGCCGCCGCGCTTCTTGG
TGCACCTGGCCTCGTGGAGAAAGACGGGGGCGGATCTCGGGGCCGTCGCG
GCCATCGTGCAAGAGGAGGGAATGTTCAAGCGCCTCACC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8853:494..6082-

>mRNA_Ecto-sp13_S_contig8853.20346.1 ID=mRNA_Ecto-sp13_S_contig8853.20346.1|Name=mRNA_Ecto-sp13_S_contig8853.20346.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1308bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8853:494..6082- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGAGCACACAGCCGGCAAGCAGAGCACACGTCTCTCTCGTCCCCAGC
TATATATCTCCACGCGCGGCGTTGGCTAAGGACCATGGTGAAGAAGGTGC
CGGCGTGCTACGGCATTCGGAAGGGGCGAGGTGCCCCTGTCGTGGTGCAC
TCGTGGGCGGAGGTGGTTGCCAAAACGAACGGCTTCCCGGGCGCCGACTT
CAGGAAATTCAAGACGCCGGAGGAAGCTACGGATTACGCCAACCTGGTCG
ATGAGGGCGGGGGGCTTAACCCCGCTCCGGCGGGATGGTCGACCCTGTGG
TTCGATGGCGGCTGTCGAGGCAATCCCGGCCCGTCTGGGGCGGGCGCGGT
TATCTTTAACGACAGCGAGAAGGAGCTATACAGCGGGTATAAGTACCTGG
GCGAAGGGAAGACCAACAACGAAGCTGAGTATGAGAGCGTCATCCTCGGA
CTCAAAGCCGCCGCTAAGCTTAGCATCACGCAACTCGTGGTCAAGGGCGA
TTCTATGCTGGTTATTCAGCAGATGATGGGGAAGTGGCGGGTGTCGGCAC
CGAAGCTAGTTGGACTTCACCGCCAGGCATCCGAGGTAGTAAAGCAGCAC
CAGCTCAAGTGCACCTGGCACCACGTGCCCCGCAAGCTCAACGTCCGCGC
GGACCTTCTGGCGAACATCGCCATGGACAGCAAGTCGATGGACGAGATCT
ACGACCCTTCCACGGGGGTCGTCAACACCGCCCCCAACGCGGCGGCCGCG
GCAGCCGCAGCCGCAGCCGCAGCCGCCGCTGCCGCCGCAGCCGCTGCCGC
TTCCGCCCCTGCCGCGCTGCCGGGCATCGTCCCCACCCTGCCGGGCATCG
GGGGCTCGGCTGGTACGACCGTGGCGTCCACTTCGGCCGCACCGGCGCCG
GTGACCCTCCCGCCGCCGTCGCTGAAGCCCCTTTCCATCCTCCCGGGCGC
TACCGACGCCTACCCTCACGCCCCGGCCTCGGCCGCCTCGGCATCTGCTG
TGCCCCGGTCCATCGAAGAGGCTCGCGAGGTGGCCGCGGTCGCCGCTGCC
ACCGCTGCCTATGCGGCCGTTGCCGCGGACGCCCGCGCCTCGATCGCGGC
CGGCGGCGGCGTGACGAGCACGTCCGGCCTCAAGGTGCCCGACGGGCAGG
CTGCCAGGGCGATGTGGGCGTCGCTTGCCACCGGTAGCCTGGCCGAGTCC
TCGCCGCCGCGCTTCTTGGTGCACCTGGCCTCGTGGAGAAAGACGGGGGC
GGATCTCGGGGCCGTCGCGGCCATCGTGCAAGAGGAGGGAATGTTCAAGC
GCCTCACC
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