prot_Ecto-sp13_S_contig12450.2034.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12450.2034.1
Unique Nameprot_Ecto-sp13_S_contig12450.2034.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length225
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12450.2034.1 vs. uniprot
Match: A0A6H5K771_9PHAE (PIPK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K771_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 3.790e-30
Identity = 113/116 (97.41%), Postives = 113/116 (97.41%), Query Frame = 0 
Query:   76 VSTTDGVDGGHGRVGAEPPAADVETAGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTESVLNQPPVLSSSLGVDFGESPPFLQLSKGKNSAPAAAAVEGSGMT 191
            VSTTDGVDGGHGRVGAEPPAADVETAGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   TESVLNQPPVLSSSLGVDFGESPPFLQLSKGKNSAPAAAAVEGSGMT
Sbjct:  138 VSTTDGVDGGHGRVGAEPPAADVETAGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TESVLNQPPVLSSSLGVDFGESPPFLQLSKGKNSAPAAAAVEGSGMT 250
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12450.2034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K771_9PHAE3.790e-3097.41PIPK domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..225
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12450contigEcto-sp13_S_contig12450:2114..2788 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12450.2034.1mRNA_Ecto-sp13_S_contig12450.2034.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12450 2114..2790 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12450.2034.1 ID=prot_Ecto-sp13_S_contig12450.2034.1|Name=mRNA_Ecto-sp13_S_contig12450.2034.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=225bp
AAAFSAALAGVPFSAAASSGEKDGDGPDTAGGTSAAATAPVAAGDEKSAA
AVEGGGAHGLPAGGHHHPETAAKAVVSTTDGVDGGHGRVGAEPPAADVET
AGEGGGGGGGGAAALRRHAGGTDDNDDDDDDDDDDDDEDEDEDDTESVLN
QPPVLSSSLGVDFGESPPFLQLSKGKNSAPAAAAVEGSGMTAAAAAAAAG
KKKQAGGAATAGAPGGAAASTMVGI
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