mRNA_Ecto-sp13_S_contig88522.20345.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig88522.20345.1
Unique NamemRNA_Ecto-sp13_S_contig88522.20345.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig88522.20345.1 vs. uniprot
Match: G3G485_9PHAE (78 kDa glucose-regulated protein (Fragment) n=23 Tax=Fucaceae TaxID=3010 RepID=G3G485_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 9.680e-34
Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 1 
Query:    1 QELESTINEALDWLDETPDAELEDLEDKKKEVEQIANPIMKDLYQQAPQGGPEEDFDFGDDEL 189
            +ELESTINEALDWLDETPDA+LEDLEDKKKEVEQIANPIMKDLYQQAPQGG E+DFDFGDDE 
Sbjct:    1 EELESTINEALDWLDETPDADLEDLEDKKKEVEQIANPIMKDLYQQAPQGGAEDDFDFGDDEF 63
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BLAST of mRNA_Ecto-sp13_S_contig88522.20345.1 vs. uniprot
Match: D7FQC8_ECTSI (Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQC8_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 4.500e-32
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 1 
Query:    1 QELESTINEALDWLDETPDAELEDLEDKKKEVEQIANPIMKDLYQQAPQGGPEEDFDFGDDEL 189
            +ELESTINEALDWLDETPDAELEDLEDKKKEVEQIANPIMKDLYQQAPQGGPEEDFDFGDDEL
Sbjct:  595 EELESTINEALDWLDETPDAELEDLEDKKKEVEQIANPIMKDLYQQAPQGGPEEDFDFGDDEL 657
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BLAST of mRNA_Ecto-sp13_S_contig88522.20345.1 vs. uniprot
Match: A0A6V2YLG4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2YLG4_HETAK)

HSP 1 Score: 89.4 bits (220), Expect = 2.720e-19
Identity = 45/66 (68.18%), Postives = 58/66 (87.88%), Query Frame = 1 
Query:    1 QELESTINEALDWLDETPDAELEDLEDKKKEVEQIANPIMKDLYQ-QAPQGG--PEEDFDFGDDEL 189
            +ELESTIN+ALDWLD+TP+ + +D +DK+KEVEQIA+PIMK+LYQ QAP GG   ++D+DFGDDEL
Sbjct:  592 EELESTINDALDWLDDTPEGDAQDYKDKQKEVEQIASPIMKELYQGQAPSGGRDDDDDYDFGDDEL 657
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BLAST of mRNA_Ecto-sp13_S_contig88522.20345.1 vs. uniprot
Match: A0A7S2FNC6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FNC6_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.810e-17
Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 1 
Query:    1 QELESTINEALDWLDETPDAELEDLEDKKKEVEQIANPIMKDLYQQAPQGGP-------EEDFDFGDDEL 189
            +EL++TINEALDWLDE P+AE E+ ++K+KEVEQ+ANPIM++LYQ A  GGP          +DFGDDEL
Sbjct:  126 EELDNTINEALDWLDENPEAEAEEFDEKQKEVEQVANPIMRELYQSA--GGPGGXXXXXXXXYDFGDDEL 193
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BLAST of mRNA_Ecto-sp13_S_contig88522.20345.1 vs. uniprot
Match: D7FZ60_ECTSI (BiP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ60_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 4.850e-16
Identity = 42/67 (62.69%), Postives = 49/67 (73.13%), Query Frame = 1 
Query:    1 QELESTINEALDWLDETPDAELEDLEDKKKEVEQIANPIMKDLYQQAPQGGPEE----DFDFGDDEL 189
            +ELESTINEALDWLDETP+AE E  + + K++EQIANPIM  LY Q   GG       D+DFGDDEL
Sbjct:  768 EELESTINEALDWLDETPNAETEQFQSRMKDIEQIANPIMSRLYSQDSTGGXXXXXXYDYDFGDDEL 834
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BLAST of mRNA_Ecto-sp13_S_contig88522.20345.1 vs. uniprot
Match: A0A7S2FHR6_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FHR6_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 5.860e-15
Identity = 38/59 (64.41%), Postives = 47/59 (79.66%), Query Frame = 1 
Query:   31 LDWLDETPDAELEDLEDKKKEVEQIANPIMKDLYQQAPQGGP------EEDFDFGDDEL 189
            LDWLDE P+A+ ED E+K+KEVEQ+ANPIM++LYQQA  GG       +ED+DFGDDEL
Sbjct:  625 LDWLDENPEADAEDYEEKQKEVEQVANPIMRELYQQAGAGGAGGMPDDDEDYDFGDDEL 683
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BLAST of mRNA_Ecto-sp13_S_contig88522.20345.1 vs. uniprot
Match: A0A7S4AFT0_9STRA (Hypothetical protein n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A7S4AFT0_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.040e-14
Identity = 38/64 (59.38%), Postives = 51/64 (79.69%), Query Frame = 1 
Query:    1 QELESTINEALDWLDETPDAELEDLEDKKKEVEQIANPIMKDLYQQAPQGGPEEDF-DFGDDEL 189
            +EL+  I+EALDW+DE P+A+ ED ++K KEVEQ+ANPIM+++Y  A  GG +ED  DFGDDEL
Sbjct:  595 KELQDMIDEALDWMDENPEADKEDYDEKMKEVEQVANPIMRNVYAGAGGGGGDEDAGDFGDDEL 658
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BLAST of mRNA_Ecto-sp13_S_contig88522.20345.1 vs. uniprot
Match: A0A6H5JRK6_9PHAE (HSP70 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK6_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 7.120e-14
Identity = 40/67 (59.70%), Postives = 49/67 (73.13%), Query Frame = 1 
Query:    1 QELESTINEALDWLDETPDAELEDLEDKKKEVEQIANPIMKDLYQQAPQGG----PEEDFDFGDDEL 189
            +ELESTINEALDWLDET +AE E L+ + +++EQIA PIM  LY Q   GG     + D+DFGDDEL
Sbjct:  623 EELESTINEALDWLDETTNAETELLQSRMEDIEQIAKPIMSRLYSQDSTGGRGGGDDYDYDFGDDEL 689
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BLAST of mRNA_Ecto-sp13_S_contig88522.20345.1 vs. uniprot
Match: B7FUB7_PHATC (ER luminal binding protein n=6 Tax=Bacillariophycidae TaxID=33850 RepID=B7FUB7_PHATC)

HSP 1 Score: 72.8 bits (177), Expect = 1.810e-13
Identity = 34/63 (53.97%), Postives = 47/63 (74.60%), Query Frame = 1 
Query:    1 QELESTINEALDWLDETPDAELEDLEDKKKEVEQIANPIMKDLYQQAPQGGPEEDFDFGDDEL 189
            +EL+  I+E LDW+D  P+A+ ED ++K KEVEQ+ANPIM+++Y     GG E+D DF DDEL
Sbjct:  597 KELQDMIDETLDWMDGNPEADKEDYDEKLKEVEQVANPIMRNVYSGGAGGGAEDDADFADDEL 659
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BLAST of mRNA_Ecto-sp13_S_contig88522.20345.1 vs. uniprot
Match: A0A7S2UT55_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UT55_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.360e-13
Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 1 
Query:    1 QELESTINEALDWLDETPDAELEDLEDKKKEVEQIANPIMKDLYQQAPQGGP-EEDF-DFGDDEL 189
            +EL   I+EALDW+DE P+AE ED ++K+KEVEQ+ANPIM+  Y     GG  EED  DFGDDEL
Sbjct:  459 KELVDMIDEALDWMDENPEAEKEDYDEKQKEVEQVANPIMRQFYAAGAGGGAAEEDMGDFGDDEL 523
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig88522.20345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G3G485_9PHAE9.680e-3492.0678 kDa glucose-regulated protein (Fragment) n=23 T... [more]
D7FQC8_ECTSI4.500e-3298.41Molecular chaperones GRP78/BiP/KAR2, HSP70 superfa... [more]
A0A6V2YLG4_HETAK2.720e-1968.18Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2FNC6_9STRA1.810e-1760.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
D7FZ60_ECTSI4.850e-1662.69BiP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A7S2FHR6_9STRA5.860e-1564.41Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S4AFT0_9STRA2.040e-1459.38Hypothetical protein n=2 Tax=Bacillariaceae TaxID=... [more]
A0A6H5JRK6_9PHAE7.120e-1459.70HSP70 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
B7FUB7_PHATC1.810e-1353.97ER luminal binding protein n=6 Tax=Bacillariophyci... [more]
A0A7S2UT55_9STRA3.360e-1360.00Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig88522contigEcto-sp13_S_contig88522:331..522 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score75.1
Seed ortholog evalue1.3e-11
Seed eggNOG ortholog2850.Phatr54246
Preferred nameHSPA5
Model size192
KEGG koko:K03283,ko:K09490
KEGG TC1.A.33,1.A.33.1
KEGG Pathwayko03040,ko03060,ko04010,ko04141,ko04144,ko04213,ko04612,ko04915,ko04918,ko05020,ko05134,ko05145,ko05162,ko05164,ko05169,map03040,map03060,map04010,map04141,map04144,map04213,map04612,map04915,map04918,map05020,map05134,map05145,map05162,map05164,map05169
KEGG ModuleM00353,M00355
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000082,GO:0000166,GO:0000271,GO:0000278,GO:0000323,GO:0000325,GO:0000741,GO:0000742,GO:0000746,GO:0000747,GO:0000902,GO:0000904,GO:0000974,GO:0001085,GO:0001655,GO:0001664,GO:0001822,GO:0001910,GO:0001912,GO:0001914,GO:0001916,GO:0001917,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002703,GO:0002705,GO:0002706,GO:0002708,GO:0002709,GO:0002711,GO:0002819,GO:0002821,GO:0002822,GO:0002824,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005102,GO:0005488,GO:0005504,GO:0005509,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005615,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005764,GO:0005765,GO:0005773,GO:0005774,GO:0005775,GO:0005776,GO:0005783,GO:0005788,GO:0005789,GO:0005790,GO:0005791,GO:0005793,GO:0005794,GO:0005829,GO:0005856,GO:0005874,GO:0005882,GO:0005886,GO:0005911,GO:0005938,GO:0005975,GO:0005976,GO:0006073,GO:0006355,GO:0006357,GO:0006457,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006518,GO:0006605,GO:0006606,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006620,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006897,GO:0006913,GO:0006914,GO:0006915,GO:0006928,GO:0006950,GO:0006983,GO:0006984,GO:0006986,GO:0006996,GO:0006997,GO:0007017,GO:0007018,GO:0007033,GO:0007040,GO:0007049,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007517,GO:0007519,GO:0007568,GO:0007600,GO:0007606,GO:0007608,GO:0008021,GO:0008088,GO:0008104,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008289,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009250,GO:0009266,GO:0009267,GO:0009272,GO:0009314,GO:0009408,GO:0009410,GO:0009506,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009628,GO:0009636,GO:0009653,GO:0009705,GO:0009719,GO:0009725,GO:0009735,GO:0009790,GO:0009792,GO:0009826,GO:0009856,GO:0009860,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009932,GO:0009966,GO:0009968,GO:0009986,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010042,GO:0010045,GO:0010212,GO:0010243,GO:0010332,GO:0010383,GO:0010466,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0010656,GO:0010660,GO:0010662,GO:0010664,GO:0010665,GO:0010667,GO:0010720,GO:0010941,GO:0010951,GO:0010970,GO:0010975,GO:0010976,GO:0012501,GO:0012505,GO:0014069,GO:0014070,GO:0014074,GO:0014706,GO:0014823,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0016051,GO:0016191,GO:0016192,GO:0016246,GO:0016310,GO:0016441,GO:0016458,GO:0016462,GO:0016592,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017015,GO:0017038,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0019904,GO:0019941,GO:0019953,GO:0021549,GO:0021575,GO:0021577,GO:0021587,GO:0021589,GO:0021680,GO:0021695,GO:0022008,GO:0022037,GO:0022402,GO:0022411,GO:0022414,GO:0023051,GO:0023052,GO:0023057,GO:0030054,GO:0030100,GO:0030133,GO:0030154,GO:0030162,GO:0030163,GO:0030176,GO:0030182,GO:0030312,GO:0030334,GO:0030335,GO:0030424,GO:0030425,GO:0030431,GO:0030433,GO:0030496,GO:0030512,GO:0030554,GO:0030705,GO:0030900,GO:0030902,GO:0030968,GO:0031047,GO:0031090,GO:0031204,GO:0031224,GO:0031227,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031341,GO:0031343,GO:0031344,GO:0031346,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031406,GO:0031410,GO:0031625,GO:0031667,GO:0031668,GO:0031669,GO:0031685,GO:0031686,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0031984,GO:0032091,GO:0032268,GO:0032269,GO:0032270,GO:0032279,GO:0032355,GO:0032501,GO:0032502,GO:0032504,GO:0032507,GO:0032541,GO:0032553,GO:0032555,GO:0032559,GO:0032570,GO:0032879,GO:0032940,GO:0032984,GO:0032989,GO:0032991,GO:0033036,GO:0033218,GO:0033267,GO:0033293,GO:0033365,GO:0033554,GO:0033692,GO:0033993,GO:0034097,GO:0034099,GO:0034406,GO:0034504,GO:0034605,GO:0034613,GO:0034620,GO:0034637,GO:0034641,GO:0034645,GO:0034663,GO:0034975,GO:0034976,GO:0035194,GO:0035437,GO:0035639,GO:0035690,GO:0035966,GO:0035967,GO:0036003,GO:0036094,GO:0036211,GO:0036335,GO:0036465,GO:0036477,GO:0036498,GO:0036499,GO:0036500,GO:0036503,GO:0040007,GO:0040012,GO:0040017,GO:0040019,GO:0040029,GO:0042026,GO:0042149,GO:0042175,GO:0042220,GO:0042221,GO:0042277,GO:0042493,GO:0042546,GO:0042592,GO:0042594,GO:0042623,GO:0042698,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043021,GO:0043022,GO:0043025,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043086,GO:0043154,GO:0043161,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043195,GO:0043197,GO:0043198,GO:0043202,GO:0043204,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043230,GO:0043231,GO:0043232,GO:0043233,GO:0043279,GO:0043281,GO:0043393,GO:0043412,GO:0043496,GO:0043531,GO:0043603,GO:0043618,GO:0043620,GO:0043624,GO:0043632,GO:0043679,GO:0043933,GO:0044036,GO:0044038,GO:0044042,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044262,GO:0044264,GO:0044265,GO:0044267,GO:0044297,GO:0044306,GO:0044309,GO:0044389,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044432,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044448,GO:0044451,GO:0044456,GO:0044463,GO:0044464,GO:0044703,GO:0044706,GO:0044743,GO:0044764,GO:0044770,GO:0044772,GO:0044843,GO:0044849,GO:0044877,GO:0045047,GO:0045111,GO:0045121,GO:0045184,GO:0045185,GO:0045202,GO:0045471,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045807,GO:0045861,GO:0045862,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0045995,GO:0046677,GO:0046683,GO:0046686,GO:0046689,GO:0046777,GO:0046872,GO:0046903,GO:0046907,GO:0048284,GO:0048468,GO:0048471,GO:0048488,GO:0048511,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048532,GO:0048545,GO:0048583,GO:0048584,GO:0048585,GO:0048588,GO:0048589,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048868,GO:0048869,GO:0048872,GO:0050542,GO:0050764,GO:0050766,GO:0050767,GO:0050769,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050896,GO:0051049,GO:0051050,GO:0051082,GO:0051087,GO:0051094,GO:0051098,GO:0051100,GO:0051128,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051261,GO:0051270,GO:0051272,GO:0051273,GO:0051274,GO:0051278,GO:0051336,GO:0051346,GO:0051402,GO:0051591,GO:0051592,GO:0051603,GO:0051641,GO:0051649,GO:0051651,GO:0051704,GO:0051716,GO:0051787,GO:0051960,GO:0051962,GO:0052547,GO:0052548,GO:0055044,GO:0055085,GO:0060255,GO:0060284,GO:0060322,GO:0060359,GO:0060537,GO:0060538,GO:0060548,GO:0060560,GO:0060627,GO:0060904,GO:0061024,GO:0061061,GO:0061077,GO:0061083,GO:0061635,GO:0061684,GO:0061741,GO:0061919,GO:0065002,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070062,GO:0070382,GO:0070589,GO:0070592,GO:0070670,GO:0070727,GO:0070848,GO:0070879,GO:0070880,GO:0070887,GO:0070972,GO:0070997,GO:0071214,GO:0071216,GO:0071236,GO:0071241,GO:0071248,GO:0071276,GO:0071277,GO:0071287,GO:0071310,GO:0071320,GO:0071345,GO:0071353,GO:0071363,GO:0071407,GO:0071417,GO:0071478,GO:0071479,GO:0071480,GO:0071495,GO:0071496,GO:0071554,GO:0071702,GO:0071704,GO:0071705,GO:0071782,GO:0071806,GO:0071840,GO:0071852,GO:0071944,GO:0071966,GO:0072001,GO:0072318,GO:0072319,GO:0072321,GO:0072347,GO:0072594,GO:0072595,GO:0072599,GO:0072657,GO:0080090,GO:0080134,GO:0080135,GO:0080171,GO:0090074,GO:0090092,GO:0090101,GO:0090150,GO:0090287,GO:0090288,GO:0090559,GO:0097038,GO:0097159,GO:0097212,GO:0097213,GO:0097214,GO:0097305,GO:0097367,GO:0097447,GO:0097458,GO:0097501,GO:0097708,GO:0098588,GO:0098589,GO:0098657,GO:0098793,GO:0098794,GO:0098805,GO:0098827,GO:0098852,GO:0098857,GO:0098984,GO:0099003,GO:0099020,GO:0099021,GO:0099080,GO:0099081,GO:0099111,GO:0099503,GO:0099504,GO:0099512,GO:0099513,GO:0099522,GO:0099523,GO:0099524,GO:0099568,GO:0099572,GO:0104004,GO:0120025,GO:0120035,GO:0120038,GO:0150034,GO:1900101,GO:1900102,GO:1900407,GO:1900408,GO:1901031,GO:1901032,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901567,GO:1901575,GO:1901576,GO:1901654,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901998,GO:1902074,GO:1902679,GO:1902680,GO:1902882,GO:1902883,GO:1903047,GO:1903201,GO:1903202,GO:1903205,GO:1903206,GO:1903320,GO:1903322,GO:1903332,GO:1903334,GO:1903506,GO:1903507,GO:1903508,GO:1903561,GO:1903573,GO:1903844,GO:1903845,GO:1903891,GO:1903894,GO:1903895,GO:1903897,GO:1904313,GO:1904592,GO:1904593,GO:1904764,GO:1905710,GO:1905897,GO:1990089,GO:1990090,GO:1990124,GO:1990440,GO:1990832,GO:1990833,GO:1990834,GO:1990836,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000116,GO:2000117,GO:2000145,GO:2000147,GO:2001023,GO:2001024,GO:2001038,GO:2001039,GO:2001141
Exons1
EggNOG free text desc.Belongs to the heat shock protein 70 family
EggNOG OGs2XAUE@2836,COG0443@1,KOG0100@2759
Cds size192
COG Functional cat.O
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01009,ko03009,ko03029,ko03041,ko03051,ko03110,ko04131,ko04147,ko04516
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464157.4486854-CDS-Ecto-sp13_S_contig88522:330..5221681464157.4486854-CDS-Ecto-sp13_S_contig88522:330..522Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig88522 331..522 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig88522.20345.1prot_Ecto-sp13_S_contig88522.20345.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig88522 331..522 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig88522.20345.1

>prot_Ecto-sp13_S_contig88522.20345.1 ID=prot_Ecto-sp13_S_contig88522.20345.1|Name=mRNA_Ecto-sp13_S_contig88522.20345.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=64bp
QELESTINEALDWLDETPDAELEDLEDKKKEVEQIANPIMKDLYQQAPQG
GPEEDFDFGDDEL*
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mRNA from alignment at Ecto-sp13_S_contig88522:331..522-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig88522.20345.1 ID=mRNA_Ecto-sp13_S_contig88522.20345.1|Name=mRNA_Ecto-sp13_S_contig88522.20345.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=192bp|location=Sequence derived from alignment at Ecto-sp13_S_contig88522:331..522- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGAGCTCGAGTCCACCATCAACGAGGCGTTGGATTGGCTGGACGAGAC
CCCCGACGCGGAGCTCGAGGACTTGGAGGACAAGAAGAAGGAGGTGGAGC
AGATCGCGAACCCGATCATGAAGGACTTGTACCAGCAGGCACCGCAGGGT
GGCCCGGAGGAGGACTTCGACTTCGGAGATGACGAGTTGTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig88522:331..522-

>mRNA_Ecto-sp13_S_contig88522.20345.1 ID=mRNA_Ecto-sp13_S_contig88522.20345.1|Name=mRNA_Ecto-sp13_S_contig88522.20345.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=192bp|location=Sequence derived from alignment at Ecto-sp13_S_contig88522:331..522- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGAGCTCGAGTCCACCATCAACGAGGCGTTGGATTGGCTGGACGAGAC
CCCCGACGCGGAGCTCGAGGACTTGGAGGACAAGAAGAAGGAGGTGGAGC
AGATCGCGAACCCGATCATGAAGGACTTGTACCAGCAGGCACCGCAGGGT
GGCCCGGAGGAGGACTTCGACTTCGGAGATGACGAGTTGTAA
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