prot_Ecto-sp13_S_contig8848.20338.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8848.20338.1
Unique Nameprot_Ecto-sp13_S_contig8848.20338.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length126
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8848.20338.1 vs. uniprot
Match: D8LSM0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM0_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 2.520e-35
Identity = 66/68 (97.06%), Postives = 68/68 (100.00%), Query Frame = 0 
Query:   59 MGVAGLTGYINKNLRGAVAMEDLREGDTLAIDGSGWMFHLLEGQRVDHGGDYDLLHKTVVRKVGRLRQ 126
            MGVAGLTGYINKNLRGAVAMEDL+EGDTLAIDGSGWMFHLLEGQRVDHGGDYDLLHKTVVR+VGRLRQ
Sbjct:    1 MGVAGLTGYINKNLRGAVAMEDLQEGDTLAIDGSGWMFHLLEGQRVDHGGDYDLLHKTVVREVGRLRQ 68
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8848.20338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSM0_ECTSI2.520e-3597.06Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 59..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8848contigEcto-sp13_S_contig8848:3591..6078 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8848.20338.1mRNA_Ecto-sp13_S_contig8848.20338.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8848 3591..6079 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8848.20338.1 ID=prot_Ecto-sp13_S_contig8848.20338.1|Name=mRNA_Ecto-sp13_S_contig8848.20338.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=126bp
LRLGGGRSSSCCNSSRRSCGAEAGGIGSRARFGTPPPPLPQPTTLLGRRP
AGSRGQCLMGVAGLTGYINKNLRGAVAMEDLREGDTLAIDGSGWMFHLLE
GQRVDHGGDYDLLHKTVVRKVGRLRQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029060PIN-like_dom_sf