prot_Ecto-sp13_S_contig88462.20335.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig88462.20335.1
Unique Nameprot_Ecto-sp13_S_contig88462.20335.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length39
Homology
BLAST of mRNA_Ecto-sp13_S_contig88462.20335.1 vs. uniprot
Match: D8LRY6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY6_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.250e-14
Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 0
Query:    1 MLSLVCSVEISRFSHRFRTVLRTLGAVNQISTDGQVSR 38
            MLSLVCSVEISRFSHRFRTVLRTLGAVNQISTDGQV+R
Sbjct:  172 MLSLVCSVEISRFSHRFRTVLRTLGAVNQISTDGQVTR 209          
BLAST of mRNA_Ecto-sp13_S_contig88462.20335.1 vs. uniprot
Match: A0A7S3L569_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L569_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 4.800e-10
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 0
Query:    1 MLSLVCSVEISRFSHRFRTVLRTLGAVNQISTDGQVSR 38
            ++S+VC VEIS FSHRFRTVLRTLGA+NQ+STD QV R
Sbjct:  201 VVSIVCVVEISIFSHRFRTVLRTLGAINQVSTDSQVRR 238          
BLAST of mRNA_Ecto-sp13_S_contig88462.20335.1 vs. uniprot
Match: A0A448Z6T5_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6T5_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.290e-9
Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    3 SLVCSVEISRFSHRFRTVLRTLGAVNQISTDGQVSR 38
            S+VC VEIS FSHRFRTVL+TLGA+NQ+STD QV R
Sbjct:  216 SIVCVVEISIFSHRFRTVLKTLGAINQVSTDSQVKR 251          
BLAST of mRNA_Ecto-sp13_S_contig88462.20335.1 vs. uniprot
Match: A0A835ZB76_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB76_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.730e-9
Identity = 28/38 (73.68%), Postives = 34/38 (89.47%), Query Frame = 0
Query:    1 MLSLVCSVEISRFSHRFRTVLRTLGAVNQISTDGQVSR 38
            +L+LVCS+EIS  SHRFRTVL+TLGAVNQ+ST+ QV R
Sbjct:  145 LLALVCSIEISMLSHRFRTVLQTLGAVNQVSTETQVKR 182          
BLAST of mRNA_Ecto-sp13_S_contig88462.20335.1 vs. uniprot
Match: A0A7S3QAU3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QAU3_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.050e-8
Identity = 25/36 (69.44%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    3 SLVCSVEISRFSHRFRTVLRTLGAVNQISTDGQVSR 38
            S++C VEIS FSH+FRTVL+TLGA+NQ+ST+ QV R
Sbjct:   44 SIICVVEISIFSHKFRTVLQTLGAINQVSTESQVKR 79          
BLAST of mRNA_Ecto-sp13_S_contig88462.20335.1 vs. uniprot
Match: A0A7S2YGE5_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YGE5_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.140e-8
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 MLSLVCSVEISRFSHRFRTVLRTLGAVNQISTDGQVSR 38
            ++SLVC  EI+ FSHRFRTVL+TLGA+NQ+STD QV R
Sbjct:  196 VVSLVCVCEITIFSHRFRTVLQTLGAINQVSTDSQVRR 233          
BLAST of mRNA_Ecto-sp13_S_contig88462.20335.1 vs. uniprot
Match: A0A7S2LIW5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LIW5_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.570e-8
Identity = 26/38 (68.42%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 MLSLVCSVEISRFSHRFRTVLRTLGAVNQISTDGQVSR 38
            ++SLVC  EI+ FSHRFRTVL+TLGA+NQ+ST+ QV R
Sbjct:  190 LVSLVCVCEITIFSHRFRTVLKTLGAINQVSTESQVKR 227          
BLAST of mRNA_Ecto-sp13_S_contig88462.20335.1 vs. uniprot
Match: A0A7S4MTN3_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MTN3_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 5.420e-8
Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    3 SLVCSVEISRFSHRFRTVLRTLGAVNQISTDGQVSR 38
            S+VC  EI+ FSHRFRTVL+TLGA+NQ+ST+ QV R
Sbjct:  184 SIVCVCEITIFSHRFRTVLKTLGAINQVSTESQVKR 219          
BLAST of mRNA_Ecto-sp13_S_contig88462.20335.1 vs. uniprot
Match: A0A7R9VQ88_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VQ88_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 5.560e-8
Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    3 SLVCSVEISRFSHRFRTVLRTLGAVNQISTDGQVSR 38
            S+VC  EI+ FSHRFRTVL+TLGA+NQ+ST+ QV R
Sbjct:  207 SIVCVCEITIFSHRFRTVLKTLGAINQVSTESQVKR 242          
BLAST of mRNA_Ecto-sp13_S_contig88462.20335.1 vs. uniprot
Match: A0A7S2HB75_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HB75_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 5.600e-8
Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    3 SLVCSVEISRFSHRFRTVLRTLGAVNQISTDGQVSR 38
            S+VC  EI+ FSHRFRTVL+TLGA+NQ+ST+ QV R
Sbjct:  212 SIVCVYEITVFSHRFRTVLKTLGAINQVSTESQVKR 247          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig88462.20335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D8LRY6_ECTSI1.250e-1497.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3L569_9STRA4.800e-1076.32Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A448Z6T5_9STRA1.290e-977.78Uncharacterized protein n=2 Tax=Pseudo-nitzschia m... [more]
A0A835ZB76_9STRA1.730e-973.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3QAU3_9STRA1.050e-869.44Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2YGE5_9STRA1.140e-871.05Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S2LIW5_9STRA1.570e-868.42Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S4MTN3_9STRA5.420e-869.44Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7R9VQ88_9STRA5.560e-869.44Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2HB75_9STRA5.600e-869.44Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig88462contigEcto-sp13_S_contig88462:86..202 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig88462.20335.1mRNA_Ecto-sp13_S_contig88462.20335.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig88462 86..217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig88462.20335.1 ID=prot_Ecto-sp13_S_contig88462.20335.1|Name=mRNA_Ecto-sp13_S_contig88462.20335.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=39bp
MLSLVCSVEISRFSHRFRTVLRTLGAVNQISTDGQVSR*
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