prot_Ecto-sp13_S_contig1245.2033.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1245.2033.1
Unique Nameprot_Ecto-sp13_S_contig1245.2033.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length81
Homology
BLAST of mRNA_Ecto-sp13_S_contig1245.2033.1 vs. uniprot
Match: A0A6H5K880_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K880_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 1.930e-46
Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0
Query:    1 MATLRQLAQDGHTVICSIHQPRSSIYGMFDDVLLLSEGRVMFQGPAKRIGSYFRSKGYPMPSNTNPGDFAVDVVSVDNTSK 81
            MATLRQLAQDGHTVICSIHQPRSSIYGMFDDVLLLSEGRVMFQGPAKRIGSYFRSKGYPMPS+TNPGDFAVDVVSVD TSK
Sbjct:  158 MATLRQLAQDGHTVICSIHQPRSSIYGMFDDVLLLSEGRVMFQGPAKRIGSYFRSKGYPMPSHTNPGDFAVDVVSVDYTSK 238          
BLAST of mRNA_Ecto-sp13_S_contig1245.2033.1 vs. uniprot
Match: D8LKI7_ECTSI (White-brown-complex ABC transporter family (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI7_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 5.330e-45
Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0
Query:    1 MATLRQLAQDGHTVICSIHQPRSSIYGMFDDVLLLSEGRVMFQGPAKRIGSYFRSKGYPMPSNTNPGDFAVDVVSVDNTSK 81
            MATLRQLAQDGHTVICSIHQPRSSI+GMFDDVLLLSEGRVMFQGPAKRIGSYFRSKGYPMPSNTNPGDFAVDVVSVD TSK
Sbjct:  209 MATLRQLAQDGHTVICSIHQPRSSIFGMFDDVLLLSEGRVMFQGPAKRIGSYFRSKGYPMPSNTNPGDFAVDVVSVDYTSK 289          
BLAST of mRNA_Ecto-sp13_S_contig1245.2033.1 vs. uniprot
Match: I0Z251_COCSC (ABC transporter domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z251_COCSC)

HSP 1 Score: 108 bits (269), Expect = 1.290e-25
Identity = 46/80 (57.50%), Postives = 66/80 (82.50%), Query Frame = 0
Query:    1 MATLRQLAQDGHTVICSIHQPRSSIYGMFDDVLLLSEGRVMFQGPAKRIGSYFRSKGYPMPSNTNPGDFAVDVVSVDNTS 80
            M TL+ LA +G TV+CSIHQPRSSI+ MFDD+LLLSEG++++ GPAK + S+F S GYP+P+N NP +F  D++S+D+++
Sbjct:  252 MQTLKDLANEGKTVVCSIHQPRSSIFSMFDDLLLLSEGQIVYSGPAKGVISHFESLGYPIPANYNPAEFIADLISIDSSA 331          
BLAST of mRNA_Ecto-sp13_S_contig1245.2033.1 vs. uniprot
Match: A0A8J9REU9_9CHLO (Protein white n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9REU9_9CHLO)

HSP 1 Score: 106 bits (264), Expect = 6.120e-25
Identity = 46/80 (57.50%), Postives = 65/80 (81.25%), Query Frame = 0
Query:    1 MATLRQLAQDGHTVICSIHQPRSSIYGMFDDVLLLSEGRVMFQGPAKRIGSYFRSKGYPMPSNTNPGDFAVDVVSVDNTS 80
            M TL+ LA DG TV+CSIHQPRSSI+ MFDD+LLLSEG +++ GPAK + S+F S G+P+P+N NP +F  D++S++++S
Sbjct:  253 MQTLKDLAMDGKTVVCSIHQPRSSIFSMFDDLLLLSEGSIIYSGPAKGVISHFESLGHPIPANYNPAEFIADLISINSSS 332          
BLAST of mRNA_Ecto-sp13_S_contig1245.2033.1 vs. uniprot
Match: A0A8J5V418_ZIZPA (AAA domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5V418_ZIZPA)

HSP 1 Score: 105 bits (263), Expect = 8.360e-25
Identity = 50/81 (61.73%), Postives = 61/81 (75.31%), Query Frame = 0
Query:    1 MATLRQLAQDGHTVICSIHQPRSSIYGMFDDVLLLSEGRVMFQGPAKRIG-SYFRSKGYPMPSNTNPGDFAVDVVSVDNTS 80
            M TLRQLA+DGHTVICSIHQPR S+YG FDD+ LLSEG V++ GPAK    +YF S GY  P + NP +F  D++SVD +S
Sbjct:  241 METLRQLAEDGHTVICSIHQPRGSVYGKFDDIALLSEGEVVYMGPAKEEPLTYFASLGYQCPDHVNPAEFLADLISVDYSS 321          
BLAST of mRNA_Ecto-sp13_S_contig1245.2033.1 vs. uniprot
Match: A0A833R2I4_9POAL (ABC transporter G family member 7 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R2I4_9POAL)

HSP 1 Score: 105 bits (261), Expect = 1.570e-24
Identity = 50/81 (61.73%), Postives = 62/81 (76.54%), Query Frame = 0
Query:    1 MATLRQLAQDGHTVICSIHQPRSSIYGMFDDVLLLSEGRVMFQGPAKRIG-SYFRSKGYPMPSNTNPGDFAVDVVSVDNTS 80
            M TLRQLA+DGHTVICSIHQPRSS+Y  FDD++LLSEG V++ GPAK    SYF + GY  P + NP +F  D++SVD +S
Sbjct:  244 METLRQLAEDGHTVICSIHQPRSSVYAKFDDIILLSEGLVVYAGPAKEEPLSYFATLGYECPEHVNPAEFLADLISVDYSS 324          
BLAST of mRNA_Ecto-sp13_S_contig1245.2033.1 vs. uniprot
Match: A0A843VVE1_COLES (ABC transporter domain-containing protein (Fragment) n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843VVE1_COLES)

HSP 1 Score: 104 bits (259), Expect = 1.600e-24
Identity = 49/81 (60.49%), Postives = 61/81 (75.31%), Query Frame = 0
Query:    1 MATLRQLAQDGHTVICSIHQPRSSIYGMFDDVLLLSEGRVMFQGPAKRIG-SYFRSKGYPMPSNTNPGDFAVDVVSVDNTS 80
            M TL+QLAQDGHTVICSIHQPR S+Y  FDD++LLSEG V++ GPAK    SYF + GY  P + NP +F  D++S+D TS
Sbjct:  263 METLQQLAQDGHTVICSIHQPRGSVYAKFDDIILLSEGAVVYMGPAKEEPLSYFANFGYNCPDHVNPAEFLADLISIDYTS 343          
BLAST of mRNA_Ecto-sp13_S_contig1245.2033.1 vs. uniprot
Match: A0A804UFI4_MAIZE (ABC transporter domain-containing protein n=2 Tax=Zea mays TaxID=4577 RepID=A0A804UFI4_MAIZE)

HSP 1 Score: 103 bits (257), Expect = 1.910e-24
Identity = 47/78 (60.26%), Postives = 59/78 (75.64%), Query Frame = 0
Query:    1 MATLRQLAQDGHTVICSIHQPRSSIYGMFDDVLLLSEGRVMFQGPAKRIG-SYFRSKGYPMPSNTNPGDFAVDVVSVD 77
            M TLRQLAQDGHTVICSIHQPR S+YG FDD++LLS+G  ++ GPAK    +YF S GY  P + NP +F  D++S+D
Sbjct:  243 METLRQLAQDGHTVICSIHQPRGSVYGKFDDIVLLSDGETVYMGPAKEEPLTYFSSLGYQCPDHMNPAEFLADLISID 320          
BLAST of mRNA_Ecto-sp13_S_contig1245.2033.1 vs. uniprot
Match: A0A446KZC6_TRITD (ABC2_membrane_7 domain-containing protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446KZC6_TRITD)

HSP 1 Score: 99.0 bits (245), Expect = 3.250e-24
Identity = 47/81 (58.02%), Postives = 58/81 (71.60%), Query Frame = 0
Query:    1 MATLRQLAQDGHTVICSIHQPRSSIYGMFDDVLLLSEGRVMFQGPAKRIG-SYFRSKGYPMPSNTNPGDFAVDVVSVDNTS 80
            M TLRQLA+DGHTVICSIHQPR S+Y   DD++LLSEG V++ GPAK     YF S GY  P + NP +F  D++S D +S
Sbjct:   22 METLRQLAEDGHTVICSIHQPRGSVYSKCDDIVLLSEGEVVYMGPAKEEPLKYFASLGYQCPGHENPAEFLADLISTDYSS 102          
BLAST of mRNA_Ecto-sp13_S_contig1245.2033.1 vs. uniprot
Match: A0A453DQQ0_AEGTS (ABC transporter domain-containing protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453DQQ0_AEGTS)

HSP 1 Score: 102 bits (253), Expect = 3.450e-24
Identity = 48/81 (59.26%), Postives = 59/81 (72.84%), Query Frame = 0
Query:    1 MATLRQLAQDGHTVICSIHQPRSSIYGMFDDVLLLSEGRVMFQGPAKRIG-SYFRSKGYPMPSNTNPGDFAVDVVSVDNTS 80
            M TLRQLA+DGHTVICSIHQPR S+Y  FDD++LLSEG V++ GPAK     YF S GY  P + NP +F  D++S D +S
Sbjct:  188 METLRQLAEDGHTVICSIHQPRGSVYSKFDDIVLLSEGEVVYMGPAKEEPLKYFASLGYQCPDHENPAEFLADLISTDYSS 268          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1245.2033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K880_9PHAE1.930e-4697.53ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LKI7_ECTSI5.330e-4597.53White-brown-complex ABC transporter family (Partia... [more]
I0Z251_COCSC1.290e-2557.50ABC transporter domain-containing protein n=1 Tax=... [more]
A0A8J9REU9_9CHLO6.120e-2557.50Protein white n=1 Tax=Coccomyxa sp. Obi TaxID=2315... [more]
A0A8J5V418_ZIZPA8.360e-2561.73AAA domain-containing protein n=1 Tax=Zizania palu... [more]
A0A833R2I4_9POAL1.570e-2461.73ABC transporter G family member 7 n=1 Tax=Carex li... [more]
A0A843VVE1_COLES1.600e-2460.49ABC transporter domain-containing protein (Fragmen... [more]
A0A804UFI4_MAIZE1.910e-2460.26ABC transporter domain-containing protein n=2 Tax=... [more]
A0A446KZC6_TRITD3.250e-2458.02ABC2_membrane_7 domain-containing protein n=2 Tax=... [more]
A0A453DQQ0_AEGTS3.450e-2459.26ABC transporter domain-containing protein n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..56
e-value: 2.0E-7
score: 32.7
NoneNo IPR availablePANTHERPTHR19241ATP-BINDING CASSETTE TRANSPORTERcoord: 1..79
NoneNo IPR availablePANTHERPTHR19241:SF450ABC TRANSPORTER G FAMILY MEMBER 1coord: 1..79
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1245contigEcto-sp13_S_contig1245:17903..18145 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1245.2033.1mRNA_Ecto-sp13_S_contig1245.2033.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1245 17891..18145 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1245.2033.1 ID=prot_Ecto-sp13_S_contig1245.2033.1|Name=mRNA_Ecto-sp13_S_contig1245.2033.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=81bp
MATLRQLAQDGHTVICSIHQPRSSIYGMFDDVLLLSEGRVMFQGPAKRIG
SYFRSKGYPMPSNTNPGDFAVDVVSVDNTSK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase