prot_Ecto-sp13_S_contig8845.20333.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8845.20333.1
Unique Nameprot_Ecto-sp13_S_contig8845.20333.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length640
Homology
BLAST of mRNA_Ecto-sp13_S_contig8845.20333.1 vs. uniprot
Match: A0A6H5JWC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC9_9PHAE)

HSP 1 Score: 950 bits (2456), Expect = 0.000e+0
Identity = 571/640 (89.22%), Postives = 584/640 (91.25%), Query Frame = 0
Query:    2 DAQDVRRLPSSRDLRLLKKPPIAHVLTNTTATATTAEIDSMFSGNLSSGGTNSNPSSNSTSQAKQEYGLETVPTKLGGAALSASAVGPRSPDSSNGQFTAPPSTNRSTARAPSTPPSPAALGTVSLTTRPYSPRRSMSIRTPRALAPLLTDVRRVSWRLKSSRRSSVGGGGRKDRAKDGLSSGFFSSSPSPSATPRNASSQKRATGSLNPWGGGTPGGKPSRMMSRTRSMINNTFGRMSLRVPVISPRSVVPETQXXXXXXX--DATCMPPSPAAAXXXXXXASPLGEVSLEIPCREQCLSGAVGGGEAAGRCALHVGGGDKEYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAQGDCDGDGDRWVEARGRRTEASEEGKQHHLAGVRAAGGVGKEGELPTATVSARQDTFSEQSGGEVPLMDREEEEEEIVALSSYLACARGRGWPWSGKNILWAEYVSLNGHHRWVRAEHCRHALLLVRGWLYLLELPTEAVTRHQTKGLTTSARGSWYVGLNACDLSHLSVPLAPTEPRGASGARSDLEAPSCGLILHKRGVLGALAWVECRSAASRDALVDQVSAWARTAGTKGTASRSFRVEPRSSAHLSAEFGGERRGRKVASLTDERQACPLW 639
            DAQDVRRLPSS D+RLLK PPIAHV+T      TTA+IDSMF GNLSSGGTNSN SSNS SQAKQEYGL TVP  LGGAALSASAVGPRSP SSNGQ+TAPPSTNRSTARAPSTPPSPAALGT+S TTRPYSPRRS+SIRTPRALAPLLTDVRRVSWRLKSSRRSSVGGGGRK+RAKDGLSSGFFS  PSPSATPRNASSQK+ATGSLNPWGGGTPGGKPSR MSRTRSMINNTFGRMSLRVPVISPRSVVPET+XXXXXXX  DATCMPPSPAAAXXXXXX SPLGEVS E PCRE+ L GAVGG                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAQGDCDGDGD WVEAR RRTEASE+GKQHHLAGVRAAGG GK  ELP  TVSARQDTFSEQS GEVP +DREEEEEEIVALSSYLACARGRGWPWSGK+ILWAEYVSLNGHHRWVRAEHCRHALLLVRGWLYLLELPTEAVTRHQTKGLTTSARGSWYVGLNACDLSHLSVPLAPTEPRGASGARSDLEAPSCGLILHKRGVLGALAWVECRSAASRDALVD VSAWAR AGTKGTASRSFRVEPRSSAHLSAEFGGERRGRKVASLTDERQACPLW
Sbjct:  152 DAQDVRRLPSSGDVRLLK-PPIAHVIT------TTAKIDSMFRGNLSSGGTNSNNSSNSHSQAKQEYGLGTVPRTLGGAALSASAVGPRSPGSSNGQYTAPPSTNRSTARAPSTPPSPAALGTISPTTRPYSPRRSISIRTPRALAPLLTDVRRVSWRLKSSRRSSVGGGGRKNRAKDGLSSGFFS--PSPSATPRNASSQKQATGSLNPWGGGTPGGKPSRTMSRTRSMINNTFGRMSLRVPVISPRSVVPETEXXXXXXXGADATCMPPSPAAAXXXXXXXSPLGEVSSETPCRERRLLGAVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAQGDCDGDGDWWVEARDRRTEASEKGKQHHLAGVRAAGGAGKGAELPMVTVSARQDTFSEQSRGEVPRLDREEEEEEIVALSSYLACARGRGWPWSGKDILWAEYVSLNGHHRWVRAEHCRHALLLVRGWLYLLELPTEAVTRHQTKGLTTSARGSWYVGLNACDLSHLSVPLAPTEPRGASGARSDLEAPSCGLILHKRGVLGALAWVECRSAASRDALVDHVSAWARAAGTKGTASRSFRVEPRSSAHLSAEFGGERRGRKVASLTDERQACPLW 782          
BLAST of mRNA_Ecto-sp13_S_contig8845.20333.1 vs. uniprot
Match: D7FZ63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ63_ECTSI)

HSP 1 Score: 596 bits (1537), Expect = 7.940e-208
Identity = 363/415 (87.47%), Postives = 370/415 (89.16%), Query Frame = 0
Query:  224 MMSRTRSMINNTFGRMSLRVPVISPRSVVPETQXXXXXXXDATCMPPSPAAAXXXXXXASPLGEVSLEIPCREQCLSGAVGGGEAAGRCALHVGGGDKEYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAQGDCDGDGDRWVEARGRRTEASEEGKQHHLAGVRAAGGVGKEGELPTATVSARQDTFSEQSGGEVPLMDREEEEEEIVALSSYLACARGRGWPWSGKNILWAEYVSLNGHHRWVRAEHCRHALLLVRGWLYLLELPTEAVTRHQTKGLTTSARGSWYVGLNACDLSHLSVPLAPTEPRGASGARSDLEAPSCGLILHKRGVLGALAWVECRSAASRDALVDQVSAWARTAGTKGTASRSFRVEPRSSAHLSAEFGGERRGRKVASLTDERQACPL 638
            MM RTRSMINNTFGRMSLRVPVISPRSVVPET+       DATCMPPSPAAAXXXXXX SP GEVS EIPCREQ L G VGGGE                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAQGDCDGDGD WV+AR RRTEASE+G +H LAGVRAAGG G   EL TATVSARQDTFSEQSGGEVP +DREEEEEEIVALSSYLACARGRGWPWSGK+ILWAEYVSLNGHHRWVRAEHCRHALLLVRGWLYLLELPTEAVTRH+TKGLTTSARGSWYVGLNACDLSHLSVPLAPTEP GA GARSDLEAPSCGLILHKRGVLGALAWVECRSAASRDALVDQVSAWAR AGTKGTASRSFRVEPRSSAHLSA FGGERRGRKVASLTDERQACPL
Sbjct:    1 MMRRTRSMINNTFGRMSLRVPVISPRSVVPETETET----DATCMPPSPAAAXXXXXXXSPPGEVSPEIPCREQRLLGTVGGGEXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAQGDCDGDGDGWVDARDRRTEASEKGNKHDLAGVRAAGGAGTGAELLTATVSARQDTFSEQSGGEVPRLDREEEEEEIVALSSYLACARGRGWPWSGKDILWAEYVSLNGHHRWVRAEHCRHALLLVRGWLYLLELPTEAVTRHRTKGLTTSARGSWYVGLNACDLSHLSVPLAPTEPWGACGARSDLEAPSCGLILHKRGVLGALAWVECRSAASRDALVDQVSAWARAAGTKGTASRSFRVEPRSSAHLSAGFGGERRGRKVASLTDERQACPL 408          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8845.20333.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JWC9_9PHAE0.000e+089.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ63_ECTSI7.940e-20887.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8845contigEcto-sp13_S_contig8845:1854..4211 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8845.20333.1mRNA_Ecto-sp13_S_contig8845.20333.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8845 1806..4402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8845.20333.1 ID=prot_Ecto-sp13_S_contig8845.20333.1|Name=mRNA_Ecto-sp13_S_contig8845.20333.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=640bp
MDAQDVRRLPSSRDLRLLKKPPIAHVLTNTTATATTAEIDSMFSGNLSSG
GTNSNPSSNSTSQAKQEYGLETVPTKLGGAALSASAVGPRSPDSSNGQFT
APPSTNRSTARAPSTPPSPAALGTVSLTTRPYSPRRSMSIRTPRALAPLL
TDVRRVSWRLKSSRRSSVGGGGRKDRAKDGLSSGFFSSSPSPSATPRNAS
SQKRATGSLNPWGGGTPGGKPSRMMSRTRSMINNTFGRMSLRVPVISPRS
VVPETQTETETETDATCMPPSPAAAPPSPATASPLGEVSLEIPCREQCLS
GAVGGGEAAGRCALHVGGGDKEYDDGEDNNESSALLRKPPMGSSMTSSSA
FFPPDTASDDDQAQGDCDGDGDRWVEARGRRTEASEEGKQHHLAGVRAAG
GVGKEGELPTATVSARQDTFSEQSGGEVPLMDREEEEEEIVALSSYLACA
RGRGWPWSGKNILWAEYVSLNGHHRWVRAEHCRHALLLVRGWLYLLELPT
EAVTRHQTKGLTTSARGSWYVGLNACDLSHLSVPLAPTEPRGASGARSDL
EAPSCGLILHKRGVLGALAWVECRSAASRDALVDQVSAWARTAGTKGTAS
RSFRVEPRSSAHLSAEFGGERRGRKVASLTDERQACPLW*
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