prot_Ecto-sp13_S_contig8843.20332.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8843.20332.1
Unique Nameprot_Ecto-sp13_S_contig8843.20332.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length718
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8843.20332.1 vs. uniprot
Match: A0A6H5K2P5_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P5_9PHAE)

HSP 1 Score: 434 bits (1116), Expect = 1.690e-129
Identity = 328/341 (96.19%), Postives = 329/341 (96.48%), Query Frame = 0 
Query:  379 TGEAGEEEAALALGGGQGGAEVVVPGGDTDGTVVRTYTEVDFTNGELPSGATMFEAVQMLMLKHARETAGGEVPITSSGDRFPHRSMPMPREQWGKTITLEFSPRSCSSHSAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RRDRQGKDKKEKPLEVLELPGVLAPGATPLDARLAVVHGLMEKGGGGGIGAGFRFGEHLCLLSALQAVCEEWSGLRRSLVSHGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRKQACNPLALCTGSLPSWCVGLP 718
            TGE GEEEAALALGGGQGGAEVVV GGD  GTVVR YTEVDFTNGELPSGATMFEAVQMLMLKHARETAGGEVPITSSGDRFPHRSMPMPREQWGK ITLEFSPRSCSSHSAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RRDR+G DKK K LEVLELPGVLAPGATPLDARLAVVHGLMEKGGGGGIGAGFRFGEHLCLLSALQAVCEEW GLRRSLVSHGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRK ACNPLALCTGSLPSWCVGLP
Sbjct: 1150 TGETGEEEAALALGGGQGGAEVVVAGGDAGGTVVRRYTEVDFTNGELPSGATMFEAVQMLMLKHARETAGGEVPITSSGDRFPHRSMPMPREQWGKAITLEFSPRSCSSHSAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRDRKGMDKKGKALEVLELPGVLAPGATPLDARLAVVHGLMEKGGGGGIGAGFRFGEHLCLLSALQAVCEEWLGLRRSLVSHGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRK-ACNPLALCTGSLPSWCVGLP 1489
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BLAST of mRNA_Ecto-sp13_S_contig8843.20332.1 vs. uniprot
Match: D7FHF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF2_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 5.560e-5
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 0 
Query:  697 KQACNPLALCTGSLPSWCVGLP 718
            KQACNPLALCTGSLPSWCVGLP
Sbjct:    7 KQACNPLALCTGSLPSWCVGLP 28
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8843.20332.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2P5_9PHAE1.690e-12996.19HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FHF2_ECTSI5.560e-5100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8843contigEcto-sp13_S_contig8843:2..5415 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8843.20332.1mRNA_Ecto-sp13_S_contig8843.20332.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8843 2..6466 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8843.20332.1 ID=prot_Ecto-sp13_S_contig8843.20332.1|Name=mRNA_Ecto-sp13_S_contig8843.20332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=718bp
MAAPGPPAAASSSSNPSTRKASSSSSRGRGSSIGGRAGRRKSSAAPSPLP
SAAEAASASNAAEAAKGGGVAARSSSSSSSSNKRRRVSSPPSTSAAAGGA
AASAADSGRSKRTTGTATAGATRVVRGGGGGGGGGNPRRSSRVVPAAAAA
KSKRGGTTNKLPATGGEGDAAAVASSTAGSAKTKRQSKSKSKSKKTPSPR
QRQQPQQRQPAKRVSGKDSTGGGGRNSSRGVASPGTAPMTPVTSRASGSG
SSLGGRASGGGGGSGLPATAGGGGWQPPWRAGGSATAAAAAAAAAAAAAA
AATSVGSSSAAGGGSSTRNRSSSSSSSSSKLPLLQWTLSGGGGGGGGGGS
RKRNGKGRAGGAAEENQGKGRGHNHNSSTGEAGEEEAALALGGGQGGAEV
VVPGGDTDGTVVRTYTEVDFTNGELPSGATMFEAVQMLMLKHARETAGGE
VPITSSGDRFPHRSMPMPREQWGKTITLEFSPRSCSSHSAKPPPATSAAS
ASPGGAAGRAASAAPPASASGGPAGSGAAASSSSGSGDSATAAGSLPPAE
VSSSSSAHAGPPSAVGSAADSSSRRVGGGGGGSRRDRQGKDKKEKPLEVL
ELPGVLAPGATPLDARLAVVHGLMEKGGGGGIGAGFRFGEHLCLLSALQA
VCEEWSGLRRSLVSHGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRKQAC
NPLALCTGSLPSWCVGLP
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