prot_Ecto-sp13_S_contig1245.2032.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1245.2032.1
Unique Nameprot_Ecto-sp13_S_contig1245.2032.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length223
Homology
BLAST of mRNA_Ecto-sp13_S_contig1245.2032.1 vs. uniprot
Match: D8LKI7_ECTSI (White-brown-complex ABC transporter family (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI7_ECTSI)

HSP 1 Score: 359 bits (921), Expect = 5.970e-118
Identity = 194/213 (91.08%), Postives = 199/213 (93.43%), Query Frame = 0
Query:    1 MLLPRVLQLLIASSFLFSTTSAVDKLDVEWKDVSFSVGRGKKKAILDGVSGRANAGKVLAVMGPSGSGKTTLLNALAGQVPYSKKTQLHGTLTVGGAERAPDQEQASAFLAWHAFVKQEDVFYSQLTVRETLLMAARLRLPSSVPLEEKSAMVDRLISKLGLSKVASTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDAFQA 213
            MLLPRVL LLIASS LFSTTSAVDKLDVEWKDVS SVGR KK AILDGVSGRANAGKVLAVMGPSGSGKTTLLNALAGQ+PYSK+T+LHGTLTVGGAERAPDQEQA        FVKQEDVFYSQLTVRETLLMAARLRLPSSVPLEEKSAMVD+LISKLGLSKVASTIVGDEKTRGISGGEKKRLS+ CQLFGTPSLIFCDEPTTGLDAFQA
Sbjct:    1 MLLPRVLPLLIASSCLFSTTSAVDKLDVEWKDVSCSVGRSKKNAILDGVSGRANAGKVLAVMGPSGSGKTTLLNALAGQLPYSKRTRLHGTLTVGGAERAPDQEQA--------FVKQEDVFYSQLTVRETLLMAARLRLPSSVPLEEKSAMVDKLISKLGLSKVASTIVGDEKTRGISGGEKKRLSMGCQLFGTPSLIFCDEPTTGLDAFQA 205          
BLAST of mRNA_Ecto-sp13_S_contig1245.2032.1 vs. uniprot
Match: A0A6H5K880_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K880_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 9.150e-85
Identity = 150/186 (80.65%), Postives = 152/186 (81.72%), Query Frame = 0
Query:   31 KDVSFSVGRGKKKAILDGVSGRANAGKVLAVMGPSGSGKTTLLNALAGQVPYSKKTQLHGTLTVGGAERAPDQEQASAFLAWHAFVKQEDVFYSQLTVRETLLMAARLRLPSSVPLEEKSAMVDRLISKLGLSKVASTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDAFQASAA 216
            +DVSFSVGRGKKKAILDGVSGRANAGKVLAVMGPSGSGKTTLLNALAGQ                                  AFVKQEDVFYSQLTVRETLLMAARLRLPSSVPLEEKSAMVD+LISKLGLSKVASTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDAFQASAA
Sbjct:    3 RDVSFSVGRGKKKAILDGVSGRANAGKVLAVMGPSGSGKTTLLNALAGQ----------------------------------AFVKQEDVFYSQLTVRETLLMAARLRLPSSVPLEEKSAMVDKLISKLGLSKVASTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDAFQASAA 154          
BLAST of mRNA_Ecto-sp13_S_contig1245.2032.1 vs. uniprot
Match: A0A7S0QJW9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QJW9_9CRYP)

HSP 1 Score: 194 bits (494), Expect = 2.860e-57
Identity = 104/187 (55.61%), Postives = 135/187 (72.19%), Query Frame = 0
Query:   28 VEWKDVSFSVGRGKK-KAILDGVSGRANAGKVLAVMGPSGSGKTTLLNALAGQVPYSKKTQLHGTLTVGGAERAPDQEQASAFLAWHAFVKQEDVFYSQLTVRETLLMAARLRLPSSVPLEEKSAMVDRLISKLGLSKVASTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDAFQA 213
            ++W  VS ++   K  + +L+ ++GRA  GK+L +MGPSGSGKTTLLN+LAGQ+  SK  +L G + V G E         A     A+V+QED+FYSQ+TVRETLL AARLRLP ++PL  K A+V+ ++ KL L+K A+TIVG  + RGISGGEKKRLSI C+L  +PSLIF DEPTTGLD+FQA
Sbjct:   35 LDWSQVSCTLNTKKGVRHLLNNINGRAMPGKILGIMGPSGSGKTTLLNSLAGQLVSSKGLRLEGNMAVNGVEVTD-----GAAGIRKAYVRQEDIFYSQMTVRETLLFAARLRLPRTMPLASKEALVEEILGKLSLTKCANTIVGSNRVRGISGGEKKRLSIGCELIASPSLIFLDEPTTGLDSFQA 216          
BLAST of mRNA_Ecto-sp13_S_contig1245.2032.1 vs. uniprot
Match: A0A4D9D0J8_9STRA (ABC transporter domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0J8_9STRA)

HSP 1 Score: 202 bits (514), Expect = 3.110e-57
Identity = 105/173 (60.69%), Postives = 134/173 (77.46%), Query Frame = 0
Query:   43 KAILDGVSGRANAGKVLAVMGPSGSGKTTLLNALAGQVPYSKKTQLHGTLTVGGA--ERAPDQEQASAFLAWHAFVKQEDVFYSQLTVRETLLMAARLRLPSSVPLEEKSAMVDRLISKLGLSKVASTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDAFQA 213
            K +L  V+G A  G++LA++GPSGSGKTTLLN LAGQVP S    L G L V G     +P    +S+     A+V+Q+D+FYSQLTVRETL+MAARLRLP S+ L EK+++VDRL+ +LGL+K A TIVGD+K RGISGGEKKRLS+AC+L G+PSLIF DEPT+GLD++Q+
Sbjct:   89 KNLLSQVTGHAEPGRLLAILGPSGSGKTTLLNVLAGQVPASNALTLSGRLYVNGQLLSASPSSSFSSSVDYTQAYVRQQDLFYSQLTVRETLVMAARLRLPPSLTLREKTSLVDRLLKRLGLAKAADTIVGDDKVRGISGGEKKRLSLACELLGSPSLIFADEPTSGLDSYQS 261          
BLAST of mRNA_Ecto-sp13_S_contig1245.2032.1 vs. uniprot
Match: A0A7S3RUE9_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RUE9_EMIHU)

HSP 1 Score: 192 bits (488), Expect = 8.310e-57
Identity = 107/186 (57.53%), Postives = 131/186 (70.43%), Query Frame = 0
Query:   28 VEWKDVSFSVGRGKKKAILDGVSGRANAGKVLAVMGPSGSGKTTLLNALAGQVPYSKKTQLHGTLTVGGAERAPDQEQASAFLAWHAFVKQEDVFYSQLTVRETLLMAARLRLPSSVPLEEKSAMVDRLISKLGLSKVASTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDAFQA 213
            V ++ ++FS G  K K IL G SG A  G++LA+MGPSGSGKTTLLNALAGQ+    K  L G LTVGG       E +   +A   +V+QEDVFY+Q+TVRETLL AARLRLP+S  L EK   V+ +IS+L L + A TIVGD K RGISGGE+KRL+I C+L   P L+F DEPT+GLDAF A
Sbjct:   74 VSFEGLTFSTGGEKGKTILHGCSGEAAPGRMLAIMGPSGSGKTTLLNALAGQLKAGPKATLTGRLTVGGDLCGGAGEVSGLRVA---YVRQEDVFYTQMTVRETLLFAARLRLPASTSLAEKERRVEEIISRLDLGRAADTIVGDGKRRGISGGERKRLAIGCELLSDPRLLFLDEPTSGLDAFAA 256          
BLAST of mRNA_Ecto-sp13_S_contig1245.2032.1 vs. uniprot
Match: A0A1Y1ITG6_KLENI (ABC transporter G family n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ITG6_KLENI)

HSP 1 Score: 197 bits (500), Expect = 1.480e-55
Identity = 115/203 (56.65%), Postives = 147/203 (72.41%), Query Frame = 0
Query:   20 TSAVDKLD----VEWKDVSFSV----GRGKKKAILDGVSGRANAGKVLAVMGPSGSGKTTLLNALAGQVPYSKKTQLHGTLTVGGAERAPDQEQASAFLAWHAFVKQEDVFYSQLTVRETLLMAARLRLPSSVPLEEKSAMVDRLISKLGLSKVASTIVGDEK-TRGISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDAFQA 213
            +S VD++     +EW+DV  ++    GR KK  IL GV+G+A+ G++LA+MGPSGSGKT+LLNALAGQ   +K+ +L G L V G E A  +E   A+      V+Q+D+FYSQLTVRETL MAA+L+LP S P EEK A V+ LI  LGL   A TIVGD++  RGISGGE+KRLSIAC+L  +PS+IF DEPTTGLD+FQA
Sbjct:   48 SSVVDEVSTGVALEWQDVRMTLLDKKGRAKKH-ILRGVNGKASPGRLLAIMGPSGSGKTSLLNALAGQTQKAKRVKLVGCLLVNGKESASLKEHKVAY------VRQDDIFYSQLTVRETLRMAAQLQLPQSQPDEEKDAYVEELILHLGLVACADTIVGDDRRVRGISGGERKRLSIACELISSPSIIFADEPTTGLDSFQA 243          
BLAST of mRNA_Ecto-sp13_S_contig1245.2032.1 vs. uniprot
Match: A0A7S1UAZ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAZ7_9STRA)

HSP 1 Score: 188 bits (477), Expect = 2.280e-55
Identity = 103/190 (54.21%), Postives = 135/190 (71.05%), Query Frame = 0
Query:   28 VEWKDVSFSV--GRGKK-KAILDGVSGRANAGKVLAVMGPSGSGKTTLLNALAGQVPYSKKTQLHGTLTVGGAERAPDQEQASAFLAWHA-FVKQEDVFYSQLTVRETLLMAARLRLPSSVPLEEKSAMVDRLISKLGLSKVASTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDAFQA 213
            + W D+S  +    GKK K +L    G A  G++ A+MGP GSGKT+LL+ALAG+    K  +L G + V G         + +     A +VKQ+D+FY+Q+TVRETL+ AARLRLP  VPLEEK A+V+ L+SKLGL+KVA TIVGD K+RGISGGEKKRL+IAC+L G P+++F DEPT+GLD+FQA
Sbjct:   21 LRWSDLSLRIEGSDGKKDKVVLQRCFGEAAPGRLTALMGPEGSGKTSLLSALAGEAAAGKGVRLEGRVAVNGRSSKRGVRGSGSDGGVRAGYVKQQDLFYAQMTVRETLMFAARLRLPRDVPLEEKRALVEGLLSKLGLAKVADTIVGDAKSRGISGGEKKRLNIACELIGDPTILFLDEPTSGLDSFQA 210          
BLAST of mRNA_Ecto-sp13_S_contig1245.2032.1 vs. uniprot
Match: A0A8J4DGJ1_9CHLO (ABC transporter domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4DGJ1_9CHLO)

HSP 1 Score: 189 bits (480), Expect = 2.890e-55
Identity = 103/174 (59.20%), Postives = 125/174 (71.84%), Query Frame = 0
Query:   40 GKKKAILDGVSGRANAGKVLAVMGPSGSGKTTLLNALAGQVPYSKKTQLHGTLTVGGAERAPDQEQASAFLAWHAFVKQEDVFYSQLTVRETLLMAARLRLPSSVPLEEKSAMVDRLISKLGLSKVASTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDAFQA 213
            G  KAIL GVSG A  G+++ +MGPSGSGKT+LL  LAG+VP   K  L G LTV G   A    +        AFV+QED+FYS L+VRETL +AA LRLP  +  E +   V++L+  LGL+K A+T VGDEKTRG+SGGEKKRLSI C+L G+PSLIFCDEPTTGLD+FQA
Sbjct:   86 GGTKAILRGVSGVARPGRLVGLMGPSGSGKTSLLTVLAGRVPAGSKMDLTGALTVNGLPAAEAGHR-------QAFVQQEDLFYSMLSVRETLSLAAELRLPGHMSDEARDRYVEQLVGVLGLAKAAATRVGDEKTRGLSGGEKKRLSIGCELVGSPSLIFCDEPTTGLDSFQA 252          
BLAST of mRNA_Ecto-sp13_S_contig1245.2032.1 vs. uniprot
Match: A0A7S2S2A1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2A1_9STRA)

HSP 1 Score: 196 bits (497), Expect = 4.430e-55
Identity = 108/179 (60.34%), Postives = 132/179 (73.74%), Query Frame = 0
Query:   36 SVGRGKKKAILDGVSGRANAGKVLAVMGPSGSGKTTLLNALAGQVPYSKKTQLHGTLTVGGAERAPDQEQASAFLAW-HAFVKQEDVFYSQLTVRETLLMAARLRLPSSVPLEEKSAMVDRLISKLGLSKVASTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDAFQA 213
            + GR  KK ILDG+ GRA  G++LAVMGPSG GK++LLNA+AGQ+  SK   L G+L V G      +  AS  L    A+V Q D FYSQ+TVRETLL AARLRLP SV L+E   +VD L+ KLGL+K A TIVGD+K RGISGGE+KRL+IAC+L  +PS+IF DEPT+GLD+FQA
Sbjct:   91 AAGRAAKKVILDGIDGRATPGRMLAVMGPSGCGKSSLLNAVAGQMKQSKGLVLEGSLAVNG------KAVASGHLGVPFAYVTQYDTFYSQMTVRETLLFAARLRLPRSVKLKENKRIVDELMEKLGLTKSADTIVGDQKIRGISGGERKRLNIACELISSPSVIFLDEPTSGLDSFQA 263          
BLAST of mRNA_Ecto-sp13_S_contig1245.2032.1 vs. uniprot
Match: A0A388K8C4_CHABU (ABC transporter domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K8C4_CHABU)

HSP 1 Score: 197 bits (502), Expect = 1.020e-54
Identity = 106/191 (55.50%), Postives = 140/191 (73.30%), Query Frame = 0
Query:   28 VEWKDVSFSVGRGKK-----KAILDGVSGRANAGKVLAVMGPSGSGKTTLLNALAGQVPYSKKTQLHGTLTVGGAERAPDQEQASAFLAWHAFVKQEDVFYSQLTVRETLLMAARLRLPSSVPLEEKSAMVDRLISKLGLSKVASTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDAFQA 213
            +EW+++S  + + +K     K ILD +SG+A  G++LA++GPSGSGKTTLL+ALAGQV  S+   L G+L V G +      +        AFV+Q+D+FYSQLTVRETL+MAA+L+LP ++  EEK   ++ L+  LGL+ VA TIVGDEKTRGISGGE+KRLSIAC+L   PS++F DEPTTGLDAFQA
Sbjct:   86 LEWENISCELKKRQKGEVSTKKILDNISGKAFPGQLLAILGPSGSGKTTLLSALAGQVAKSENLGLTGSLKVNGKKNGTSTHR-------QAFVRQDDIFYSQLTVRETLMMAAKLQLPRTMTEEEKERHIESLMQHLGLTGVADTIVGDEKTRGISGGERKRLSIACELIAAPSVVFADEPTTGLDAFQA 269          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1245.2032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKI7_ECTSI5.970e-11891.08White-brown-complex ABC transporter family (Partia... [more]
A0A6H5K880_9PHAE9.150e-8580.65ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S0QJW9_9CRYP2.860e-5755.61Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A4D9D0J8_9STRA3.110e-5760.69ABC transporter domain-containing protein n=2 Tax=... [more]
A0A7S3RUE9_EMIHU8.310e-5757.53Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A1Y1ITG6_KLENI1.480e-5556.65ABC transporter G family n=1 Tax=Klebsormidium nit... [more]
A0A7S1UAZ7_9STRA2.280e-5554.21Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A8J4DGJ1_9CHLO2.890e-5559.20ABC transporter domain-containing protein n=1 Tax=... [more]
A0A7S2S2A1_9STRA4.430e-5560.34Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A388K8C4_CHABU1.020e-5455.50ABC transporter domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 27..217
e-value: 7.3E-42
score: 145.5
NoneNo IPR availablePANTHERPTHR19241ATP-BINDING CASSETTE TRANSPORTERcoord: 23..213
NoneNo IPR availablePANTHERPTHR19241:SF606coord: 23..213
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..222
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.804
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 46..205
e-value: 8.4E-24
score: 84.6
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 178..192
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 22..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1245contigEcto-sp13_S_contig1245:13757..17562 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1245.2032.1mRNA_Ecto-sp13_S_contig1245.2032.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1245 13757..17562 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1245.2032.1 ID=prot_Ecto-sp13_S_contig1245.2032.1|Name=mRNA_Ecto-sp13_S_contig1245.2032.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=223bp
MLLPRVLQLLIASSFLFSTTSAVDKLDVEWKDVSFSVGRGKKKAILDGVS
GRANAGKVLAVMGPSGSGKTTLLNALAGQVPYSKKTQLHGTLTVGGAERA
PDQEQASAFLAWHAFVKQEDVFYSQLTVRETLLMAARLRLPSSVPLEEKS
AMVDRLISKLGLSKVASTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIF
CDEPTTGLDAFQASAAFFFFYE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase