prot_Ecto-sp13_S_contig88322.20321.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig88322.20321.1
Unique Nameprot_Ecto-sp13_S_contig88322.20321.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length83
Homology
BLAST of mRNA_Ecto-sp13_S_contig88322.20321.1 vs. uniprot
Match: A0A6H5LE38_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE38_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.360e-37
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0
Query:    9 QVRNNSLSTLHAVSALLPVLVLELLVTLAYACVCVVLYHGVKDAPFTTLGSAFMNLFALSTTVNDPDVWLPLYDR 83
            +VRNNSLSTLHAVSALLPVLVLELLVTLAYAC CVVLYHGVKDAPFTTLGSAFMNLFALSTTVNDPDVW+PLYDR
Sbjct:  674 KVRNNSLSTLHAVSALLPVLVLELLVTLAYACGCVVLYHGVKDAPFTTLGSAFMNLFALSTTVNDPDVWMPLYDR 748          
BLAST of mRNA_Ecto-sp13_S_contig88322.20321.1 vs. uniprot
Match: A0A6U4FCQ8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FCQ8_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.230e-11
Identity = 36/79 (45.57%), Postives = 47/79 (59.49%), Query Frame = 0
Query:    3 LYPHRSQVRNNSLSTLHAVSALLPVLVLELLVTLAYACVCVVLYHGVKDAPFTTLGSAFMNLFALSTTVNDPDVWLPLY 81
            LY     VR+ S +    +     ++ +EL + L +AC CV  +  V D+ F  L   F+NLFALSTTVNDPDVWLPLY
Sbjct:  183 LYALDPAVRDGSKNVATMLPMAFAIVGMELYLALVFACACVAFFGTVPDSGFNELSDGFVNLFALSTTVNDPDVWLPLY 261          
BLAST of mRNA_Ecto-sp13_S_contig88322.20321.1 vs. uniprot
Match: A0A7S2WCP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCP3_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.990e-11
Identity = 31/56 (55.36%), Postives = 44/56 (78.57%), Query Frame = 0
Query:   30 LELLVTLAYACVCVVLYHGVK--DAPFTTLGSAFMNLFALSTTVNDPDVWLPLYDR 83
            +EL + +A++C+ + L+ GV   +  F TLG AF++L+ALSTTVNDPDVWLPL+DR
Sbjct:  153 MELFLLVAFSCMALTLFGGVARGEGAFGTLGGAFISLYALSTTVNDPDVWLPLFDR 208          
BLAST of mRNA_Ecto-sp13_S_contig88322.20321.1 vs. uniprot
Match: A0A7R9U3R5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3R5_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 5.840e-11
Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 0
Query:   10 VRNNSLSTLHAVSALLPVLVLELLVTLAYACVCVVLYHGVKDAPFTTLGSAFMNLFALSTTVNDPDVWLPLYDR 83
            +R+++ + L  +  +L ++ LEL +TL +AC CV  +  V ++ F  L  AF+N+FAL+TTVN+PDVWL LY R
Sbjct:  133 IRDSTRNILIMLPIVLAIVGLELFLTLVFACACVAFFGPVPESGFYLLSDAFINIFALATTVNNPDVWLGLYAR 206          
BLAST of mRNA_Ecto-sp13_S_contig88322.20321.1 vs. uniprot
Match: D8LFM4_ECTSI (Similar to two-pore calcium channel [Arabidopsis thaliana] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFM4_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 6.910e-7
Identity = 24/27 (88.89%), Postives = 26/27 (96.30%), Query Frame = 0
Query:   57 LGSAFMNLFALSTTVNDPDVWLPLYDR 83
            L +AFMNLFALSTTVNDPDVW+PLYDR
Sbjct:  306 LYNAFMNLFALSTTVNDPDVWMPLYDR 332          
BLAST of mRNA_Ecto-sp13_S_contig88322.20321.1 vs. uniprot
Match: K8YQT3_NANGC (Two-pore calcium channel n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YQT3_NANGC)

HSP 1 Score: 54.7 bits (130), Expect = 9.460e-7
Identity = 31/87 (35.63%), Postives = 49/87 (56.32%), Query Frame = 0
Query:    1 HPLYPHRSQVRNNSLSTLHAVSALLPVLVLELLVTLAYACVCVVLYHGV------KDAPFTTLGSAFMNLFALSTTVNDPDVWLPLY 81
            +P+  +  + RN  L  L  V +++  + +E L  L +AC  V+LY  V      +   F +L  AF++L+ LS TVNDPD++LP Y
Sbjct:  269 YPIVYYSKKARNAMLDYLRTVPSVIQWIGIEFLSVLVFACFAVILYASVDRGGASEQTAFLSLNRAFISLYELSLTVNDPDIYLPYY 355          
BLAST of mRNA_Ecto-sp13_S_contig88322.20321.1 vs. uniprot
Match: W7TKQ2_9STRA (Two-pore calcium channel n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKQ2_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 2.370e-6
Identity = 31/89 (34.83%), Postives = 49/89 (55.06%), Query Frame = 0
Query:    1 HPLYPHRSQVRNNSLSTLHAVSALLPVLVLELLVTLAYACVCVVLYHGVK------DAPFTTLGSAFMNLFALSTTVNDPDVWLPLYDR 83
            +P+  +    RN  +S +  + ++   + LE  V + YAC CVVLY  +          F    +AF++L++LS TVN+PDV+LP Y R
Sbjct:  227 YPIIYYNQHARNAMISYMKTLPSVTLWIGLEFFVIIIYACFCVVLYAHLDRYGESGQKAFENFAAAFVSLYSLSLTVNNPDVYLPYYKR 315          
BLAST of mRNA_Ecto-sp13_S_contig88322.20321.1 vs. uniprot
Match: A0A4D9D2R4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2R4_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 2.400e-6
Identity = 31/89 (34.83%), Postives = 49/89 (55.06%), Query Frame = 0
Query:    1 HPLYPHRSQVRNNSLSTLHAVSALLPVLVLELLVTLAYACVCVVLYHGVK------DAPFTTLGSAFMNLFALSTTVNDPDVWLPLYDR 83
            +P+  +    RN  +S +  + ++   + LE  V + YAC CVVLY  +          F    +AF++L++LS TVN+PDV+LP Y R
Sbjct:  227 YPIIYYNQHARNAMISYMKTLPSVTLWIGLEFFVIIIYACFCVVLYAHLDRYGESGQKAFQNFSAAFVSLYSLSLTVNNPDVYLPYYKR 315          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig88322.20321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5LE38_9PHAE1.360e-3796.00EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6U4FCQ8_9STRA1.230e-1145.57Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2WCP3_9STRA3.990e-1155.36Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7R9U3R5_9STRA5.840e-1144.59Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
D8LFM4_ECTSI6.910e-788.89Similar to two-pore calcium channel [Arabidopsis t... [more]
K8YQT3_NANGC9.460e-735.63Two-pore calcium channel n=3 Tax=Monodopsidaceae T... [more]
W7TKQ2_9STRA2.370e-634.83Two-pore calcium channel n=1 Tax=Nannochloropsis g... [more]
A0A4D9D2R4_9STRA2.400e-634.83Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.70coord: 9..81
e-value: 1.5E-5
score: 27.2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 47..83
NoneNo IPR availableTMHMMTMhelixcoord: 24..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig88322contigEcto-sp13_S_contig88322:195..443 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig88322.20321.1mRNA_Ecto-sp13_S_contig88322.20321.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig88322 195..443 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig88322.20321.1 ID=prot_Ecto-sp13_S_contig88322.20321.1|Name=mRNA_Ecto-sp13_S_contig88322.20321.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=83bp
HPLYPHRSQVRNNSLSTLHAVSALLPVLVLELLVTLAYACVCVVLYHGVK
DAPFTTLGSAFMNLFALSTTVNDPDVWLPLYDR
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