mRNA_Ecto-sp13_S_contig8830.20317.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8830.20317.1 vs. uniprot
Match: D8LCU2_ECTSI (Mitochondrial Processing Peptidase alpha subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCU2_ECTSI) HSP 1 Score: 463 bits (1191), Expect = 7.700e-161 Identity = 266/269 (98.88%), Postives = 267/269 (99.26%), Query Frame = 1
Query: 1 HGESTAEQVDDALHAAAFGDALSLGKPLTPGLSSLSADGLKEFRGARYKAPGITVIGVNVPHEDFKSHAEAALEAADSSAPAARSPAKYVGGELRVKSDVGSTSVSMAFAAPSGSDASAPAYEVLGALLGARAAAAAPSASGFSVSYTDAGLVGVTGTCPNGQAGALSQALASCFSGLATASNAEVASAIASAKVSRALKMEKPLYALLALADSASVGTDPAKAATALDGVTAAAVKKAAAAAIKSGMSMASVGNISEVPQKAEIVAML 807
HGESTAEQVDDALHAAAFGDA SLGKPLTPGLSSLSADGLKEFRGARYKAPGITVIGVNVPHEDFKS AEAALEAADSSAPAARSPAKYVGGELRVKSDVGSTSVSMAFAAPSGSDASAPAYEVLGALLGARAAAAAPSASGFSVSYTDAGLVGVTGTCP+GQAGALSQALASCFSGLATASNAEVASAIASAKVSRALKMEKPLYALLALADSASVGTDPAKAATALDGVTAAAVKKAAAAAIKSGMSMASVGNISEVPQKAEIVAML
Sbjct: 183 HGESTAEQVDDALHAAAFGDAFSLGKPLTPGLSSLSADGLKEFRGARYKAPGITVIGVNVPHEDFKSQAEAALEAADSSAPAARSPAKYVGGELRVKSDVGSTSVSMAFAAPSGSDASAPAYEVLGALLGARAAAAAPSASGFSVSYTDAGLVGVTGTCPDGQAGALSQALASCFSGLATASNAEVASAIASAKVSRALKMEKPLYALLALADSASVGTDPAKAATALDGVTAAAVKKAAAAAIKSGMSMASVGNISEVPQKAEIVAML 451
BLAST of mRNA_Ecto-sp13_S_contig8830.20317.1 vs. uniprot
Match: G5AFD5_PHYSP (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=G5AFD5_PHYSP) HSP 1 Score: 84.0 bits (206), Expect = 9.230e-15 Identity = 85/269 (31.60%), Postives = 134/269 (49.81%), Query Frame = 1
Query: 7 ESTAEQVDDALHAAAFGDALSLGKPLTPG--LSSLSADGLKEFRGARYKAPGITVIGVNVPHEDFKSHAEAALEAADSSAPAARSPAKYVGGELRVKSDVGSTSVSMAFAAPSGSDASAPAYEVLGALLGARAAAAAPSASGFSVSYTDAGLVGVTGTCPNGQAGALSQALASCFSGLATASNAEVASAIASAKVSRALKMEKPLYALLALADSASVGTDPAKAATALDGVTAAAVKKAAAAAIKSGMSMASVGNISEVPQKAEIVAML 807
E + + + +HAAAF D ++LG+PL L +LS + L + ++G V H A A + AA + AKYVGGE RVK + T V++A A A +VL ALL R AS F SY+DA LVG++G +AGAL + A+ A+A + +A+AK + AL+ + L + +A+ G P A+ ++GV+AA +++ A A+K+ S+A++G +S VP + + L
Sbjct: 178 EDASASLLEGIHAAAFYDDVTLGRPLVAAENLGALSPETLFAYYDKYVNTANAALVGAGVAHNTLTDLANAYFGDLTKGSKAASATAKYVGGETRVKKNGKFTHVALALPTVGRDSADFGASQVLRALLSLRLNN--KKASAFLSSYSDAALVGLSGYAAPSEAGALVDSFAAQLKKAASAPATK--EELAAAKTTAALEALEQQSTLSRVGLAATTGVVPKSASELVEGVSAAKLQELAQKALKATPSVAAIGKLSTVPHVDAVASKL 442
BLAST of mRNA_Ecto-sp13_S_contig8830.20317.1 vs. uniprot
Match: K3WRH0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRH0_GLOUD) HSP 1 Score: 81.3 bits (199), Expect = 7.960e-14 Identity = 84/266 (31.58%), Postives = 125/266 (46.99%), Query Frame = 1
Query: 31 DALHAAAFGDALSLGKPL--TPGLSSLSADGLKEFRGARYKAPGITVIGVNVPHEDFKSHAEAALEAADSSAPAARSPAKYVGGELRVKSDVGSTSVSMAFAAPSGSDASAPAYEVLGALLGARAAAAAPSASGFSVSYTDAGLVGVTGTCPNGQAGALSQALASCFSGLAT----ASNAEVASAIASAKVSRALKMEKPLYALLALADSASVGTDPAKAATAL-DGVTAAAVKKAAAAAIKSGMSMASVGNISEVPQKAEIVAML 807
+ +H AA+ D +LG+P+ T L+ + L +F G ++G + H D A A AP R+PAKYVGGE RVK+ T V++ F D A VL ALL R A+ F SY D+G+VG++G N GAL+++ + LAT A VA +A+ +L + + L L V PA + L D T A+++ A A+ S S+AS+G +S VP+ ++A L
Sbjct: 188 EGVHTAAYYDDATLGRPIITTENLAKFDTEELVQFYKKYVNTSGAALLGAGIEHSDLTEIANAYFSELPVGAPIDRTPAKYVGGESRVKTSSPVTHVAIGFETVGKRDPHYGAARVLRALLAGRVNP--KHATAFFGSYNDSGVVGLSGHAANTNVGALAESFIAEIKSLATTPVSAEELAVAKTVAALNAYESLGSREGVLVRLGLLGLHQV---PAPSPLELADSATPQAIQQLAQKALTSRPSVASIGKVSAVPRVDAVIAKL 448
BLAST of mRNA_Ecto-sp13_S_contig8830.20317.1 vs. uniprot
Match: A0A5D6XKE3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKE3_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.080e-13 Identity = 92/273 (33.70%), Postives = 130/273 (47.62%), Query Frame = 1
Query: 10 STAEQVDDALHAAAFGDALSLGKPLTP--GLSSLSADGLKEFRGARYKAPGITVIGVNVPHEDFKSHAEAALEAADSSAPAARSPAKYVGGELRVKSDVGSTSVSMAFAAPSGSDASAPAYEVLGALLGARAAAAAPSASGFSVSYTDAGLVGVTGTCPNGQAGALSQALASCFSGLATAS-NAE---VASAIASAKVSRALKMEKPLYALLALADSASVGTDPAKAATAL-DGVTAAAVKKAAAAAIKSGMSMASVGNISEVPQKAEIVAML 807
S + V + +HAAAF D +SLG+PL L+ A+ L +F + V G + H D + + + + A + AKYVGGE RVK+ T V++ F DA + VL A+L R A AS F Y D GLVG +G N GAL + A+ LAT S +AE VA +AS + + AL+ L V PA A +L + TA +V++ A A+ S S+ASVG +S VP ++A L
Sbjct: 182 SPSSLVAEGVHAAAFYDDVSLGRPLVSVENLAKFGAEDLWKFYETYVNSANAAVFGSGIEHSDLANLVGSYFSDLPAGSAAPHAAAKYVGGESRVKTAAPVTHVALGFETVGKRDALYGSAHVLRAVLAGRLNA--KFASAFYTPYIDGGLVGFSGHAANADVGALVDSFAAEIKSLATTSVSAEELAVAKTVASLNILSTIGSRNGATALVGLL---GVVQAPAPAPLSLAESATAKSVQELAKRALASRPSVASVGKVSAVPHVDALIAKL 449
BLAST of mRNA_Ecto-sp13_S_contig8830.20317.1 vs. uniprot
Match: H3GHN9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHN9_PHYRM) HSP 1 Score: 75.1 bits (183), Expect = 1.050e-11 Identity = 82/263 (31.18%), Postives = 127/263 (48.29%), Query Frame = 1
Query: 4 GESTAEQVDDALHAAAFGDALSLGKPLTPG--LSSLSADGLKEFRGARYKAPGITVIGVNVPHEDFKSHAEAALEAADSSAPAARSPAKYVGGELRVKSDVGSTSVSMAFAAPSGSDASAPAYEVLGALLGARAAAAAPSASGFSVSYTDAGLVGVTGTCPNGQAGALSQALASCFSGLATA--SNAEVASAIASAKVSRALKMEKPLYALLALADSASVGTDPAKAATALDGVTAAAVKKAAAAAIKSGMSMASVGNISEVP 780
G+ + + + LHAAAF + L+LG+P+ L +LS + L F ++G V H A + AA + AKYVGGE RVK T V++A A A +VL ALL R AS F SY+DA LVG++G + +AGAL + A+ A+A + E+A+A +A + + L + A+ G + ++GVTAA +++ A A+K+ S+A++G +S VP
Sbjct: 200 GDDASASLLEGLHAAAFYEDLTLGRPVAAADNLQALSPEALWAFHDKYVNTANAALVGAGVNHSTLTDLANEYFGSFAKGVEAASATAKYVGGETRVKKAAKFTHVALALPTVGRDSADFGASQVLRALLSLRLNN--KKASAFLSSYSDAALVGLSGYAVHSEAGALVDSFAAELKKAASAPATKEELAAAKTTAALEALEQYSTQTGTLGRVGLIATTGFVSQSPSALVEGVTAAKLQELAQKALKATPSVAAIGKLSAVP 460
BLAST of mRNA_Ecto-sp13_S_contig8830.20317.1 vs. uniprot
Match: F0WDC1_9STRA (Mitochondrialprocessing peptidase subunit alpha puta n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WDC1_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 4.540e-11 Identity = 89/271 (32.84%), Postives = 127/271 (46.86%), Query Frame = 1
Query: 25 VDDALHAAAFGDALSLGKPL--TPGLSSLSADGLKEFRGARYKAPGITVIGVNVPHEDFKSHAEAALEAADSSAPAARSPA-KYVGGELRVKS-DVGSTSVSMAFAAPSGSDASAPAYEVLGALLGARAAAAAPSASGFSVSYTDAGLVGVTGTCPNGQAGALSQALAS----CFSGLATASNAEVASAIASAKVSRALKMEKPLYALLALA--DSASVGTDPAKAATALDGVTAAAVKKAAAAAIKSGMSMASVGNISEVPQKAEIVAML 807
V +ALHAAAF D +SLG+P+ L + + L +F + + + HE S A A +S+ +++PA KYVGGE RVK+ T V++AF S +VL ALL AR + GF V Y D GLVG G P +AGAL LA+ S L + + A +IA+ V + ++L A A V T DGVTA ++ A ++K S+ASVG +S VP +++ L
Sbjct: 187 VMEALHAAAFYDDVSLGRPVYSLDNLETFDGETLWKFYDSHVNKSNSAITAYGIKHELLTSMATAYFSELPTSSTTSQAPASKYVGGEYRVKNLSHAHTYVALAFQTGGKSSNDYANCQVLKALLSARLRGT--NMQGFLVGYDDVGLVGAMGYAPPEEAGALVDRLAAELKKIASNLPSQKEVDAAKSIATLDVLSESNVRSNRMSILGSAALSQALVPTQN----IIFDGVTANSIMHLAHQSLKKLPSLASVGRLSNVPHLQDVLPKL 451
BLAST of mRNA_Ecto-sp13_S_contig8830.20317.1 vs. uniprot
Match: A0A8K1CRM2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRM2_PYTOL) HSP 1 Score: 72.0 bits (175), Expect = 1.120e-10 Identity = 83/268 (30.97%), Postives = 128/268 (47.76%), Query Frame = 1
Query: 25 VDDALHAAAFGDALSLGKPL--TPGLSSLSADGLKEFRGARYKAPGITVIGVNVPHEDFKSHAEAALEAAD-SSAPAARSPAKYVGGELRVKSDVGSTSVSMAFAAPSGSDASAPAYEVLGALLGARAAAAAPSASGFSVSYTDAGLVGVTGTCPNGQAGALSQALASCFSGLATASNAEVASAIASAKVSRALKM----EKPLYALLALADSASVGTDPAKAATALDGVTAAAVKKAAAAAIKSGMSMASVGNISEVPQKAEIVAML 807
V + +HAAAF D ++G+ + L + ++ L +F G+ ++G + H A SSAP + PAKYVGGE RVK +T V++ F + A VL +LL +R +A+GF SY D GLVG G + GAL + + +A+A+ +E +A+AK + AL+ + Y + L A + D VTA AV++ A A+ S S+ASVG +S VP+ ++A L
Sbjct: 188 VYENVHAAAFYDDATVGRHVLTAENLDAFDSESLAKFYEQYVNTAGLALVGSGIEHSTLTGVANEFFGGLPVSSAPLNKVPAKYVGGESRVKKVARNTYVALGFETVGKASPQYGASHVLKSLLTSRLNH--KNAAGFLASYNDVGLVGFRGFAAPAETGALVDSFVTELKKVASAAPSE--QELAAAKNAAALEAWELRSQRNYNISYLGSLAHAQASAVTPLSVTDAVTAKAVQELAQKALASRPSLASVGKLSTVPRLDAVIAKL 451
BLAST of mRNA_Ecto-sp13_S_contig8830.20317.1 vs. uniprot
Match: A0A024FZY7_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZY7_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 8.980e-10 Identity = 87/271 (32.10%), Postives = 123/271 (45.39%), Query Frame = 1
Query: 25 VDDALHAAAFGDALSLGKPL--TPGLSSLSADGLKEFRGARYKAPGITVIGVNVPHEDFKSHAEAALEAADSSAPAARSPA-KYVGGELRVKS-DVGSTSVSMAFAAPSGSDASAPAYEVLGALLGARAAAAAPSASGFSVSYTDAGLVGVTGTCPNGQAGALSQALAS----CFSGLATASNAEVASAIASAKVSRALKMEKPLYALLALADSA--SVGTDPAKAATALDGVTAAAVKKAAAAAIKSGMSMASVGNISEVPQKAEIVAML 807
V +ALHAAAF D +SLG+P+ L + L F + + G + HE S A A +S+ + +PA KYVGGE RVK+ T V++ F S +VL ALL +R + F V Y D GL G G +AGAL L + S L++ + A ++A+ V + ALL A A SV T + DGVTA ++ A ++K S+ASVG +S VP E++ L
Sbjct: 183 VMEALHAAAFYDDVSLGRPVYSLDNLERFDGETLWNFYDSHINKSNSAITGYGIKHELLTSMATAYFSELPTSSTTSETPAAKYVGGEYRVKNLSQAHTYVALGFQTGGRSSNDFATCQVLKALLTSRLRGT--NLQSFLVGYDDVGLFGAMGYASPEEAGALVDRLTTELKKIASNLSSQKELDAAKSMATLNVLNESNVRSSRMALLGSAAFAQSSVPTQNSS----FDGVTANSIMHLAHQSLKKTPSLASVGRLSNVPHLQEVLPKL 447
BLAST of mRNA_Ecto-sp13_S_contig8830.20317.1 vs. uniprot
Match: A0A3M6VG85_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VG85_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.210e-9 Identity = 79/263 (30.04%), Postives = 120/263 (45.63%), Query Frame = 1
Query: 31 DALHAAAFGDALSLGKPLTP--GLSSLSADGLKEFRGARYKAPGITVIGVNVPHEDFKSHAEAALEAADSSAPAARSPAKYVGGELRVKSDVGSTSVSMAFAAPSGSDASAPAYEVLGALLGARAAAAAPSASGFSVSYTDAGLVGVTGTCPNGQAGALSQALASCFSGLATA--SNAEVASAIASAKVSRALKMEKPLYALLALADSASVGTDPAKAATALDGVTAAAVKKAAAAAIKSGMSMASVGNISEVPQKAEIVAML 807
+ +HAAAF D +SLG+PL L + S + L + ++G V H A + + A S AKYVGGE RVK T V++A A A +VL ALL R AS F SY+D LVG++G + + GAL + A+ A+A S E+A+A A + + L + A+ G + + GVTAA +++ A A+ + S+A++G +S VP + + L
Sbjct: 186 EGVHAAAFYDDVSLGRPLASVENLKAFSPETLWAYYDKYVNTSNAALVGAGVTHSTLTDLANQYFGSFVKGSKAVSSTAKYVGGETRVKKSAKFTHVALALPTVGRDSADFGASQVLRALLSMRLNN--KKASAFLTSYSDVSLVGLSGYAAHSEVGALVDSFAAELKKTASAPASKEELATATTKAALDALEQYSTQAGTLGRIGLVATTGFVSKSPSELVKGVTAAKLQELAQKALNATPSVAAIGKLSAVPHVDAVASKL 446
BLAST of mRNA_Ecto-sp13_S_contig8830.20317.1 vs. uniprot
Match: M4BAL3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BAL3_HYAAE) HSP 1 Score: 65.1 bits (157), Expect = 2.280e-8 Identity = 77/263 (29.28%), Postives = 120/263 (45.63%), Query Frame = 1
Query: 31 DALHAAAFGDALSLGKPLTP--GLSSLSADGLKEFRGARYKAPGITVIGVNVPHEDFKSHAEAALEAADSSAPAARSPAKYVGGELRVKSDVGSTSVSMAFAAPSGSDASAPAYEVLGALLGARAAAAAPSASGFSVSYTDAGLVGVTGTCPNGQAGALSQALASCFSGLAT--ASNAEVASAIASAKVSRALKMEKPLYALLALADSASVGTDPAKAATALDGVTAAAVKKAAAAAIKSGMSMASVGNISEVPQKAEIVAML 807
+ +HAAAF D +SLG+PL P L +L+ D L + + ++G V H A + D + + + KYVGGE RVK T V++A A A +VL ALL R S SY+D L+ ++G +AGAL + F A+ ASN E+A+A +A + + AL + A+ G ++ VTA +++ A A+K+ S+A+ G +S VP + + L
Sbjct: 163 EGVHAAAFYDDVSLGRPLAPVDNLKALTPDALWSYFNKYVNTSNVALVGAGVAHITLTDLANQYFGSLDKGSKVSSAKGKYVGGENRVKHAAQYTRVALALPTVGRESADFGASQVLRALLSVRVKNN-KKVSALLSSYSDVALMSLSGYAAPSEAGALVDLFVAEFKKAASTPASNEELAAAKTTAALEALEQYSTQAGALGRIGFMATSGHVSKSPLEFVESVTATKLQELAQKALKATPSVAAYGVLSAVPHVDAVASKL 424 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8830.20317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8830.20317.1 >prot_Ecto-sp13_S_contig8830.20317.1 ID=prot_Ecto-sp13_S_contig8830.20317.1|Name=mRNA_Ecto-sp13_S_contig8830.20317.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=270bp HGESTAEQVDDALHAAAFGDALSLGKPLTPGLSSLSADGLKEFRGARYKAback to top mRNA from alignment at Ecto-sp13_S_contig8830:3..4135+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8830.20317.1 ID=mRNA_Ecto-sp13_S_contig8830.20317.1|Name=mRNA_Ecto-sp13_S_contig8830.20317.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4133bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8830:3..4135+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8830:3..4135+ >mRNA_Ecto-sp13_S_contig8830.20317.1 ID=mRNA_Ecto-sp13_S_contig8830.20317.1|Name=mRNA_Ecto-sp13_S_contig8830.20317.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=810bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8830:3..4135+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |