prot_Ecto-sp13_S_contig1245.2031.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1245.2031.1
Unique Nameprot_Ecto-sp13_S_contig1245.2031.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length649
Homology
BLAST of mRNA_Ecto-sp13_S_contig1245.2031.1 vs. uniprot
Match: D8LKI8_ECTSI (Divergent RAB-like GTPase, N-terminal myristoylation predicted by ExPASy Myristoylator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI8_ECTSI)

HSP 1 Score: 560 bits (1443), Expect = 4.030e-195
Identity = 287/308 (93.18%), Postives = 291/308 (94.48%), Query Frame = 0
Query:    1 MGQAASCCSFCCPCLLRRXXXAVPGATTEDQSKLLPSSSTNKAHKPRKEKCSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQ---VTLGVDFGCRTVDLVDRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSHEDAKCFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAKDKPGSSKKGSSPARRGRKRLSVALKGVMEHKGDRDTASSCAAQSVIGRSPAN 305
            MGQAASCCSFCCPC LRR   AVPGATTEDQSKLLPSSST KAHKPRKEKCSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQ   +TLGVDFGCRTVDL DRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK TLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSHEDAK FAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAA+DK  SSKKGSSPARRGRKRLSV+LKGVME  GDRD ASSCAAQS IGRSP+N
Sbjct:    1 MGQAASCCSFCCPCPLRRKAAAVPGATTEDQSKLLPSSSTKKAHKPRKEKCSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK-TLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSHEDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAEDKARSSKKGSSPARRGRKRLSVSLKGVMERNGDRDIASSCAAQSGIGRSPSN 307          
BLAST of mRNA_Ecto-sp13_S_contig1245.2031.1 vs. uniprot
Match: A0A835YYU6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYU6_9STRA)

HSP 1 Score: 129 bits (324), Expect = 5.590e-31
Identity = 61/123 (49.59%), Postives = 77/123 (62.60%), Query Frame = 0
Query:   72 VRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQVTLGVDFGCRTVDLVDRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKAD 194
            VRLV+VG C  GKT ++RR+L GYF     +      TLGVDFGC+TV L  +RVRLQ+WDT GS  Y SVVSHYL  ADGV + +D    E+ + ++  W P +  + P   R LL GNK D
Sbjct:    5 VRLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCD 127          
BLAST of mRNA_Ecto-sp13_S_contig1245.2031.1 vs. uniprot
Match: A0A0M0JKI6_9EUKA (Ras-related protein ric1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JKI6_9EUKA)

HSP 1 Score: 124 bits (312), Expect = 4.540e-29
Identity = 70/181 (38.67%), Postives = 104/181 (57.46%), Query Frame = 0
Query:   64 LSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQVTLGVDFGCRTVDLVDRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSHEDAKCFAEAMEAQVFETSAKLGTNVDVAVMALMQEV 244
            +  D + +  LVL+G    GK+CLL RF     DD     Y    T+GVDF  RT++L  + ++LQ+WDT G E +R++ S Y RGA G+++ +DV ++ +  +++  W   +DK+       LL GNKAD   D  V+  +VS ED K FAE ++    ETSAK GT VD A + +  E+
Sbjct:    1 MKPDYDYLFILVLIGDSGVGKSCLLLRFA----DDKWTDSYIS--TIGVDFKIRTIELDQKTIKLQIWDTAGQERFRTISSTYYRGAHGIIVVYDVTNRTSFDNVQR-WLTEIDKYARENVNKLLVGNKADIADD--VHNRQVSQEDGKAFAEKVDVPFLETSAKTGTFVDTAFLMMAHEI 172          
BLAST of mRNA_Ecto-sp13_S_contig1245.2031.1 vs. uniprot
Match: H3GC27_PHYRM (Uncharacterized protein n=26 Tax=Oomycota TaxID=4762 RepID=H3GC27_PHYRM)

HSP 1 Score: 122 bits (306), Expect = 4.950e-28
Identity = 74/209 (35.41%), Postives = 115/209 (55.02%), Query Frame = 0
Query:   64 LSGDINQVVRLVLVGGCDTGKTCLLRRFLGG--------YFDDIGHQD-YTRQ--VTLGVDFGCRTVDLVDRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSHEDAKCFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAA-KDKPGSSK 260
            +S D + + +LVL+G    GK+CLL RF GG        Y  D    D +T     T+GVDF  RTV + ++ V+LQ+WDT G E +R++ S Y RGADG++M +DV S+E+   +   W   ++++       LL GNK+D   +  V     S+E AK FA+++     ETSAK   NV+ A + +  E++  R+     ++P  +K
Sbjct:    1 MSRDYDHLFKLVLIGDSGVGKSCLLLRFAGGRLLDRLTEYVADASQDDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVND-WLNEVNRYASEGTCKLLVGNKSDISDNKAV-----SYETAKAFADSLSIPFLETSAKNAQNVEEAFLTMASELITIREMVGDSNRPAGTK 203          
BLAST of mRNA_Ecto-sp13_S_contig1245.2031.1 vs. uniprot
Match: A0A7S2DDC9_9EUKA (Hypothetical protein n=2 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DDC9_9EUKA)

HSP 1 Score: 122 bits (305), Expect = 6.420e-28
Identity = 76/201 (37.81%), Postives = 110/201 (54.73%), Query Frame = 0
Query:   64 LSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQVTLGVDFGCRTVDLVDRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSHEDAKCFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAKDKPGSSKKGSS 264
            +  D + +  LVL+G    GK+CLL RF     DD     Y    T+GVDF  RT++L  + ++LQ+WDT G E +R++ S Y RGA G+++ +DV +K +  +++  W   +DK+       LL GNKADA  +   +  +V  ED K FAE  +    ETSAK GT VD A + +  E+ +    A    PG SK G S
Sbjct:   19 MKPDYDYLFILVLIGDSGVGKSCLLLRFA----DDKWTDSYIS--TIGVDFKIRTIELDQKTIKLQIWDTAGQERFRTISSTYYRGAHGIIVVYDVTNKLSFDNVQR-WLSEIDKYARENVNKLLVGNKADAA-EGADSSRQVPMEDGKKFAEDRDIPFLETSAKTGTFVDTAFLMMAHEIKNKMNAA----PGGSKTGFS 207          
BLAST of mRNA_Ecto-sp13_S_contig1245.2031.1 vs. uniprot
Match: A0A7S1R9U1_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R9U1_ALECA)

HSP 1 Score: 122 bits (305), Expect = 1.160e-27
Identity = 67/179 (37.43%), Postives = 104/179 (58.10%), Query Frame = 0
Query:   66 GDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQVTLGVDFGCRTVDLVDRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSHEDAKCFAEAMEAQVFETSAKLGTNVDVAVMALMQEV 244
            GD + + +LV++G    GK+ LLRRF+ G +D       T   T+GVDFG R+  L  ++V+LQ+WDT GSE +R++ S Y RGA GV++ FDV+ +++   +R  W     K  P T R +L GNK D  G+    G  +S ++A   A+ +   + E SAK   NV+ A ++L + +
Sbjct:    9 GDADFIFKLVVIGDLGVGKSALLRRFVDGLYDT------TYTATIGVDFGTRSCTLDGKKVKLQIWDTAGSERFRAITSSYYRGAHGVIVVFDVSDRKSFERVRY-WLAEAGKSAPVTARRMLVGNKCDLTGE----GRSISRDEAFDLADGLGVPLVEASAKSSENVEEAFLSLARAI 176          
BLAST of mRNA_Ecto-sp13_S_contig1245.2031.1 vs. uniprot
Match: A0A7S2C3M2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C3M2_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.220e-27
Identity = 75/205 (36.59%), Postives = 114/205 (55.61%), Query Frame = 0
Query:   67 DINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQVTLGVDFGCRTVDLVDRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSHEDAKCFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAKDKPGSSKKGSSPARRGRK 271
            D + + +LVL+G    GK+CLL RF    F +     Y    T+GVDF  RT+ +    V+LQ+WDT G E +R++ S Y RGADG++M +DV S+E+   + S W   ++++       LL GNK+D R D+ V     S E+AK +AE +     ETSAK   NV+ A + +  E++  RQ      P ++  G++   RG+K
Sbjct:   11 DYDHLFKLVLIGDSGVGKSCLLLRFADNAFTE----SYIS--TIGVDFRFRTIKVEKNTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFNHV-SDWLTEVNRYASEGTCKLLVGNKSD-RADWAV-----SSEEAKVYAEKLGIPFLETSAKNAENVETAFLTMASELIKIRQARG---PKTTATGATKLERGKK 199          
BLAST of mRNA_Ecto-sp13_S_contig1245.2031.1 vs. uniprot
Match: A0A7S4Q6D0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q6D0_9DINO)

HSP 1 Score: 120 bits (302), Expect = 4.660e-27
Identity = 68/179 (37.99%), Postives = 103/179 (57.54%), Query Frame = 0
Query:   66 GDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQVTLGVDFGCRTVDLVDRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSHEDAKCFAEAMEAQVFETSAKLGTNVDVAVMALMQEV 244
            GD + + +++++G C  GK+ LLRRF+ G +       YT   T+GVDFG R+  +  ++V+LQ+WDT GSE +RS+ S Y +GA GV++ FDV+ ++T   +   W     KH P + R +L GNK D  G     G  VS ++A   A+ +   + E SAK   NV+ A + L Q V
Sbjct:   24 GDFDFIFKILVIGDCGVGKSSLLRRFVDGEYST----QYT--ATIGVDFGQRSCTVDGKKVKLQIWDTAGSERFRSITSGYYKGAHGVIVVFDVSDRKTFDHV-GFWLAEAGKHAPTSARRMLVGNKCDIEGP----GRAVSRDEALELADRLGLPLLEASAKSAENVEAAFLTLAQVV 191          
BLAST of mRNA_Ecto-sp13_S_contig1245.2031.1 vs. uniprot
Match: A0A0R3T8H0_RODNA (Uncharacterized protein n=1 Tax=Rodentolepis nana TaxID=102285 RepID=A0A0R3T8H0_RODNA)

HSP 1 Score: 118 bits (296), Expect = 9.830e-27
Identity = 65/175 (37.14%), Postives = 102/175 (58.29%), Query Frame = 0
Query:   71 VVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQVTLGVDFGCRTVDLVDRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSHEDAKCFAEAMEAQVFETSAKLGTNVDVAVMALMQEVL 245
            + +L+L+G    GK+CLL RF     DD  +++++   T+GVDF  RTVDL    ++LQ+WDT G E +R++   Y RGA G++M +DV SKE+ R++ STW   + +H       +L GNK+D          ++++E+   FA+    + FETSAK  +NV+ A   L   +L
Sbjct:   12 IFKLLLIGDSGVGKSCLLVRFT----DDTYYENFSS--TIGVDFKIRTVDLDGHHIKLQIWDTAGQERFRTMTVAYYRGAHGIIMVYDVASKESFRNIESTWLEEIKRHARPDVIKILVGNKSDLEEHR-----QITYEEGAEFAKLHGMEFFETSAKNASNVEKAFFVLASRLL 175          
BLAST of mRNA_Ecto-sp13_S_contig1245.2031.1 vs. uniprot
Match: A0A835Z965_9STRA (Rab1A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z965_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.060e-26
Identity = 72/193 (37.31%), Postives = 108/193 (55.96%), Query Frame = 0
Query:   67 DINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQVTLGVDFGCRTVDLVDRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSHEDAKCFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAKDKPGSS 259
            D + + +LVL+G    GK+CLL RF    F D     Y    T+GVDF  RTV +  + V+LQ+WDT G E +R++ S Y RGADG++M +DV S+E+   +   W   ++++       LL GNK+D R D  V     + E AK FA+++     ETSAK  +NV+ A + +  E++  R+  A  +  SS
Sbjct:    5 DYDHLFKLVLIGDSGVGKSCLLLRFADDAFTD----SYIS--TIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVND-WLSEVNRYASEGTSKLLIGNKSD-RADKAV-----TTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESS 184          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1245.2031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKI8_ECTSI4.030e-19593.18Divergent RAB-like GTPase, N-terminal myristoylati... [more]
A0A835YYU6_9STRA5.590e-3149.59P-loop containing nucleoside triphosphate hydrolas... [more]
A0A0M0JKI6_9EUKA4.540e-2938.67Ras-related protein ric1 n=1 Tax=Chrysochromulina ... [more]
H3GC27_PHYRM4.950e-2835.41Uncharacterized protein n=26 Tax=Oomycota TaxID=47... [more]
A0A7S2DDC9_9EUKA6.420e-2837.81Hypothetical protein n=2 Tax=Haptolina brevifila T... [more]
A0A7S1R9U1_ALECA1.160e-2737.43Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A7S2C3M2_9STRA1.220e-2736.59Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4Q6D0_9DINO4.660e-2737.99Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A0R3T8H0_RODNA9.830e-2737.14Uncharacterized protein n=1 Tax=Rodentolepis nana ... [more]
A0A835Z965_9STRA1.060e-2637.31Rab1A, rab family GTPase n=1 Tax=Tribonema minus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 222..244
score: 34.19
coord: 72..93
score: 37.6
coord: 182..195
score: 36.69
coord: 119..141
score: 36.78
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 72..247
e-value: 1.6E-37
score: 140.6
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 69..247
e-value: 1.9E-7
score: -5.6
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 74..243
e-value: 1.4E-9
score: 3.7
NoneNo IPR availableGENE3D3.40.50.300coord: 66..272
e-value: 9.1E-44
score: 151.1
NoneNo IPR availablePANTHERPTHR24073:SF519RAS-RELATED PROTEIN RAB-44coord: 64..260
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 64..260
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..648
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePROSITEPS51419RABcoord: 67..293
score: 21.354
IPR001806Small GTPasePFAMPF00071Rascoord: 73..245
e-value: 7.4E-34
score: 116.7
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 72..237
e-value: 1.1E-18
score: 65.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 69..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1245contigEcto-sp13_S_contig1245:7000..12855 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1245.2031.1mRNA_Ecto-sp13_S_contig1245.2031.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1245 7000..12855 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1245.2031.1 ID=prot_Ecto-sp13_S_contig1245.2031.1|Name=mRNA_Ecto-sp13_S_contig1245.2031.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=649bp
MGQAASCCSFCCPCLLRRKAAAVPGATTEDQSKLLPSSSTNKAHKPRKEK
CSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIG
HQDYTRQVTLGVDFGCRTVDLVDRRVRLQMWDTGGSETYRSVVSHYLRGA
DGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFG
VNGGEVSHEDAKCFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQF
AAKDKPGSSKKGSSPARRGRKRLSVALKGVMEHKGDRDTASSCAAQSVIG
RSPANALCADATNTEGTSSVYSSASHRDDDSSDQENNCRDQEDHGRMWSM
LPSIDDGIILGDGGEDRADGARQEQQQVSALDNSIDGRLSKASRDCESES
GWRGGGTPPRDSAGGSSHSGFNRGGRYHLINKLIIVSPSSRGARTEDIDV
RRCCDRDDQSSGGRRRQPSHVEELDGNNRGRKADNRNVTTFPKPGTIITP
EVQARSMRPVAAPRDEASSRVAVGRAPAPVPDERHQLHAGGMAEAGRDLV
VPERKKISVDAAVREAPPCHPPAAERSRALSEVTSPPVKKTDQERRDVHR
GTHNGDSDRRSLGCNNPAIASANSSFSTVLAGHDHAHFQLASPVPEQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase