prot_Ecto-sp13_S_contig8822.20310.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8822.20310.1
Unique Nameprot_Ecto-sp13_S_contig8822.20310.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length118
Homology
BLAST of mRNA_Ecto-sp13_S_contig8822.20310.1 vs. uniprot
Match: A0A6H5K7I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7I9_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 1.540e-78
Identity = 113/117 (96.58%), Postives = 114/117 (97.44%), Query Frame = 0
Query:    1 MIILTVAWSIAVFVLAGLCEIGGGWLVWQAVREKRPSRWWIVPGVLLLTAYGFVTPGLLPDVSSAEFGRAFAVYGGIFIAMSLGWGAVFDGFRADAGDYAGACVVLAGVAVMWWYPR 117
            MII TVAWSIAVFVLAGLCEIGGGWLVWQAVREKRP RWWI+PGVLLL AYGFVTPGLLPDVSSAEFGRAFAVYGGIFIAMSLGWGAVFDGFRADAGDYAGACVVLAGVAVMWWYPR
Sbjct:    1 MIIRTVAWSIAVFVLAGLCEIGGGWLVWQAVREKRP-RWWIIPGVLLLAAYGFVTPGLLPDVSSAEFGRAFAVYGGIFIAMSLGWGAVFDGFRADAGDYAGACVVLAGVAVMWWYPR 116          
BLAST of mRNA_Ecto-sp13_S_contig8822.20310.1 vs. uniprot
Match: A0A2V0NLL9_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NLL9_9CHLO)

HSP 1 Score: 138 bits (347), Expect = 9.730e-40
Identity = 67/113 (59.29%), Postives = 83/113 (73.45%), Query Frame = 0
Query:    5 TVAWSIAVFVLAGLCEIGGGWLVWQAVREKRPSRWWIVPGVLLLTAYGFVTPGLLPDVSSAEFGRAFAVYGGIFIAMSLGWGAVFDGFRADAGDYAGACVVLAGVAVMWWYPR 117
            TVA ++ +F+ AGL EIGGGWLVWQ +R+ RP  WWIV GV +L  YGF+ P L P   +A FGR +AVYGG+FIA+S  WGAV DG R DAGD+AG  V LAGV + W++PR
Sbjct:   25 TVAATLGIFLFAGLAEIGGGWLVWQGMRKGRPW-WWIVGGVAVLACYGFI-PTLQPP--AASFGRVYAVYGGVFIALSYAWGAVLDGDRPDAGDWAGGAVALAGVVLAWFWPR 133          
BLAST of mRNA_Ecto-sp13_S_contig8822.20310.1 vs. uniprot
Match: A0A150G6X1_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G6X1_GONPE)

HSP 1 Score: 131 bits (330), Expect = 2.930e-37
Identity = 67/112 (59.82%), Postives = 79/112 (70.54%), Query Frame = 0
Query:    6 VAWSIAVFVLAGLCEIGGGWLVWQAVREKRPSRWWIVPGVLLLTAYGFVTPGLLPDVSSAEFGRAFAVYGGIFIAMSLGWGAVFDGFRADAGDYAGACVVLAGVAVMWWYPR 117
            V W++ VFVLAGL EIGGGWLVWQAVR K+   ++ V G L+L AYG V P L PD   A F R +AVYGGIFI MS GWG   DG R D GD+ G+ + LAGVAV W++PR
Sbjct:   18 VFWTLGVFVLAGLAEIGGGWLVWQAVRNKK-GWYYFVGGALVLVAYG-VIPTLQPD--GATFARVYAVYGGIFIVMSYGWGWAVDGDRPDRGDWVGSAIALAGVAVAWFWPR 125          
BLAST of mRNA_Ecto-sp13_S_contig8822.20310.1 vs. uniprot
Match: D8U381_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U381_VOLCA)

HSP 1 Score: 130 bits (326), Expect = 2.290e-36
Identity = 63/112 (56.25%), Postives = 79/112 (70.54%), Query Frame = 0
Query:    6 VAWSIAVFVLAGLCEIGGGWLVWQAVREKRPSRWWIVPGVLLLTAYGFVTPGLLPDVSSAEFGRAFAVYGGIFIAMSLGWGAVFDGFRADAGDYAGACVVLAGVAVMWWYPR 117
            V W++ VF+LAGL EIGGGWLVWQAVR K+P  ++ + G L+L AYG + P L P+   A F R +AVYGGIFI MS GWG   DG R D GD+ G  + L+GVAV W++PR
Sbjct:   40 VFWTLGVFILAGLAEIGGGWLVWQAVRNKKPW-YYFISGALVLVAYGII-PTLQPE--EATFSRVYAVYGGIFIIMSYGWGWAVDGDRPDRGDWVGTAIALSGVAVAWFWPR 147          
BLAST of mRNA_Ecto-sp13_S_contig8822.20310.1 vs. uniprot
Match: A0A835XSW3_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XSW3_9CHLO)

HSP 1 Score: 130 bits (326), Expect = 4.000e-36
Identity = 61/112 (54.46%), Postives = 81/112 (72.32%), Query Frame = 0
Query:    6 VAWSIAVFVLAGLCEIGGGWLVWQAVREKRPSRWWIVPGVLLLTAYGFVTPGLLPDVSSAEFGRAFAVYGGIFIAMSLGWGAVFDGFRADAGDYAGACVVLAGVAVMWWYPR 117
            V W++ VF+LAGL EIGGGWLVWQ +R K+P  +++V G ++L AYGF+ P L P+   A F R +AVYGG+FI MS  WG V DG R D GD+ G+ + LAGVA+ W++PR
Sbjct:   59 VFWTLGVFILAGLAEIGGGWLVWQTIRNKKPW-YYMVCGAIVLVAYGFI-PTLQPE--GASFARVYAVYGGVFIVMSYSWGWVVDGDRPDTGDWVGSAIALAGVALAWFWPR 166          
BLAST of mRNA_Ecto-sp13_S_contig8822.20310.1 vs. uniprot
Match: A0A2K3DT52_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DT52_CHLRE)

HSP 1 Score: 127 bits (318), Expect = 4.610e-35
Identity = 61/112 (54.46%), Postives = 78/112 (69.64%), Query Frame = 0
Query:    6 VAWSIAVFVLAGLCEIGGGWLVWQAVREKRPSRWWIVPGVLLLTAYGFVTPGLLPDVSSAEFGRAFAVYGGIFIAMSLGWGAVFDGFRADAGDYAGACVVLAGVAVMWWYPR 117
            V W++ VF+LAGL EIGGGWL WQ +R K+P  ++ V G +LL AYG V P L P+   A F R +AVYGG+FI MS GWG   DG + D GD+AGA + LAGV + W++PR
Sbjct:   47 VFWTLGVFILAGLAEIGGGWLCWQTIRNKKPWYYY-VGGAILLVAYG-VIPTLQPE--GASFARVYAVYGGVFIIMSYGWGWAVDGDKPDTGDWAGAAIALAGVGLAWFWPR 154          
BLAST of mRNA_Ecto-sp13_S_contig8822.20310.1 vs. uniprot
Match: A0A8J4GIW8_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4GIW8_9CHLO)

HSP 1 Score: 126 bits (317), Expect = 5.170e-35
Identity = 64/112 (57.14%), Postives = 78/112 (69.64%), Query Frame = 0
Query:    6 VAWSIAVFVLAGLCEIGGGWLVWQAVREKRPSRWWIVPGVLLLTAYGFVTPGLLPDVSSAEFGRAFAVYGGIFIAMSLGWGAVFDGFRADAGDYAGACVVLAGVAVMWWYPR 117
            V W++ VF+LAGL EIGGGWLVWQ VR K+P  ++ V G L+L AYG V P L P+   A F R +AVYGGIFI MS  WG V DG R D GD+ G+ + L GVAV W++PR
Sbjct:   39 VFWTLGVFILAGLAEIGGGWLVWQTVRNKKPW-FYFVGGALVLVAYG-VIPTLQPE--GASFARVYAVYGGIFIIMSYCWGWVVDGDRPDKGDWVGSAIALTGVAVAWFWPR 146          
BLAST of mRNA_Ecto-sp13_S_contig8822.20310.1 vs. uniprot
Match: A0A7S1SWG8_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SWG8_9CHLO)

HSP 1 Score: 127 bits (318), Expect = 5.180e-35
Identity = 62/113 (54.87%), Postives = 79/113 (69.91%), Query Frame = 0
Query:    5 TVAWSIAVFVLAGLCEIGGGWLVWQAVREKRPSRWWIVPGVLLLTAYGFVTPGLLPDVSSAEFGRAFAVYGGIFIAMSLGWGAVFDGFRADAGDYAGACVVLAGVAVMWWYPR 117
            TVA S+A+F+ A L EIGGGWLVWQAVRE +PS WW + G L+L  YGF+      D    EFGR +AVYGG+FI +S  WG + DG R DAGD+ G+ V + GVA+ W++PR
Sbjct:   49 TVAVSLALFLAAALAEIGGGWLVWQAVREGKPS-WWALLGSLVLVLYGFIPTWQPVD----EFGRTYAVYGGVFIVLSYLWGWLVDGMRMDAGDWIGSIVAVIGVAIAWFWPR 156          
BLAST of mRNA_Ecto-sp13_S_contig8822.20310.1 vs. uniprot
Match: A0A7S2TT53_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TT53_9EUKA)

HSP 1 Score: 125 bits (314), Expect = 6.440e-35
Identity = 56/106 (52.83%), Postives = 76/106 (71.70%), Query Frame = 0
Query:   11 AVFVLAGLCEIGGGWLVWQAVREKRPSRWWIVPGVLLLTAYGFVTPGLLPDVSSAEFGRAFAVYGGIFIAMSLGWGAVFDGFRADAGDYAGACVVLAGVAVMWWYP 116
            A+F+ AGL EIGGGW+VWQAVRE +P  WW + G ++L  YGF+ P    D    +FG+ +AVYGG+FIAMS GW A+FDG++ D GDY G+ + L GV V+ ++P
Sbjct:   14 ALFIFAGLAEIGGGWMVWQAVREGKPW-WWALIGSIILVGYGFIPPLQPLD----DFGKLYAVYGGVFIAMSFGWAAIFDGYKPDMGDYIGSAIALVGVGVVLFWP 114          
BLAST of mRNA_Ecto-sp13_S_contig8822.20310.1 vs. uniprot
Match: UPI001F03ECCC (YnfA family protein n=1 Tax=unclassified Streptomyces TaxID=2593676 RepID=UPI001F03ECCC)

HSP 1 Score: 124 bits (311), Expect = 1.490e-34
Identity = 64/109 (58.72%), Postives = 72/109 (66.06%), Query Frame = 0
Query:    9 SIAVFVLAGLCEIGGGWLVWQAVREKRPSRWWIVPGVLLLTAYGFVTPGLLPDVSSAEFGRAFAVYGGIFIAMSLGWGAVFDGFRADAGDYAGACVVLAGVAVMWWYPR 117
            S A+FV+A L E+GG WLVWQ VRE R  RWW+  GVL L AYGF      PD   A FGR  A YGGIF+A SL WGAV DG+R D  D AGA V L G+AV+ W PR
Sbjct:    6 SAALFVVAALLEVGGAWLVWQGVREHR-GRWWVAGGVLALGAYGFAAT-FQPD---AHFGRILAAYGGIFVAGSLAWGAVADGYRPDRWDVAGALVCLTGMAVIMWAPR 109          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8822.20310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7I9_9PHAE1.540e-7896.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2V0NLL9_9CHLO9.730e-4059.29Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A150G6X1_GONPE2.930e-3759.82Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
D8U381_VOLCA2.290e-3656.25Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
A0A835XSW3_9CHLO4.000e-3654.46Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A2K3DT52_CHLRE4.610e-3554.46Uncharacterized protein n=2 Tax=Chlamydomonas rein... [more]
A0A8J4GIW8_9CHLO5.170e-3557.14Uncharacterized protein n=2 Tax=Volvox TaxID=3066 ... [more]
A0A7S1SWG8_9CHLO5.180e-3554.87Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A7S2TT53_9EUKA6.440e-3552.83Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
UPI001F03ECCC1.490e-3458.72YnfA family protein n=1 Tax=unclassified Streptomy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003844Uncharacterised protein family UPF0060PFAMPF02694UPF0060coord: 9..116
e-value: 1.5E-28
score: 99.1
IPR003844Uncharacterised protein family UPF0060PANTHERPTHR36116FAMILY NOT NAMEDcoord: 5..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 60..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..115
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 116..117
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 13..116
NoneNo IPR availableTMHMMTMhelixcoord: 96..115
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 38..60
NoneNo IPR availableTMHMMTMhelixcoord: 70..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8822contigEcto-sp13_S_contig8822:3052..5504 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8822.20310.1mRNA_Ecto-sp13_S_contig8822.20310.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8822 2930..5504 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8822.20310.1 ID=prot_Ecto-sp13_S_contig8822.20310.1|Name=mRNA_Ecto-sp13_S_contig8822.20310.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=118bp
MIILTVAWSIAVFVLAGLCEIGGGWLVWQAVREKRPSRWWIVPGVLLLTA
YGFVTPGLLPDVSSAEFGRAFAVYGGIFIAMSLGWGAVFDGFRADAGDYA
GACVVLAGVAVMWWYPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003844UPF0060