prot_Ecto-sp13_S_contig8811.20300.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8811.20300.1
Unique Nameprot_Ecto-sp13_S_contig8811.20300.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length484
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8811.20300.1 vs. uniprot
Match: D7FQ87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ87_ECTSI)

HSP 1 Score: 510 bits (1313), Expect = 3.080e-175
Identity = 249/265 (93.96%), Postives = 258/265 (97.36%), Query Frame = 0 
Query:   69 MDSGGKPVGVEGSPLFFDSDNISISSTRRSGVYQDGLTAEEVSSVATVTGTATTVSLVATNYLGDGSISTFEPSTIVEVGNETVRLDMQISDWSFCTPFGRDGGRRCMAEPQDIFLENEGALPLPPAPPPPHTLLIPRCDGETVATFRFVCDPRLVECADIVTVKYYLGEADQDPGQAPNTATIGVARGSGENGTSTSSSGALEEFWGTGMYERNLTSAEVGSFLNVSSLTPGLDYVFWSVWEHRNGSAPESNSRDFDLSRVQYW 333
            MDS GKPVGVEGSPLFFDSDNIS+SSTRRSGVYQDGL AEEVSSVAT TGTATTVSLVATNYLGDG+ISTFEPST+VEVGNETVRLD++I DWSFCTPFGRDGGRRCMAEPQDIFL+NEGALPLPPAPPPPHTLLIPRCDGETVATFRFVCDPRLVECAD+V+VKYYLGEADQDPGQAPNTATIGVARGSGENGTSTSSSGALEEFWGTG+YERNLT AEVGSFLNVSSLTPGLDYVFWSVWEH NGSAPESNSRDFDL RVQYW
Sbjct:    1 MDSDGKPVGVEGSPLFFDSDNISVSSTRRSGVYQDGLDAEEVSSVATTTGTATTVSLVATNYLGDGNISTFEPSTLVEVGNETVRLDVRIRDWSFCTPFGRDGGRRCMAEPQDIFLQNEGALPLPPAPPPPHTLLIPRCDGETVATFRFVCDPRLVECADVVSVKYYLGEADQDPGQAPNTATIGVARGSGENGTSTSSSGALEEFWGTGVYERNLTRAEVGSFLNVSSLTPGLDYVFWSVWEHGNGSAPESNSRDFDLPRVQYW 265
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8811.20300.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQ87_ECTSI3.080e-17593.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..484
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.715

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8811contigEcto-sp13_S_contig8811:3725..6652 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8811.20300.1mRNA_Ecto-sp13_S_contig8811.20300.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8811 3725..6652 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8811.20300.1 ID=prot_Ecto-sp13_S_contig8811.20300.1|Name=mRNA_Ecto-sp13_S_contig8811.20300.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=484bp
MRHLLHALPAAALLTVLGGTSGAAAQTQPAMVESFAHSALLSVRVIDGEP
NDAGDHEAMAVVVSTITEMDSGGKPVGVEGSPLFFDSDNISISSTRRSGV
YQDGLTAEEVSSVATVTGTATTVSLVATNYLGDGSISTFEPSTIVEVGNE
TVRLDMQISDWSFCTPFGRDGGRRCMAEPQDIFLENEGALPLPPAPPPPH
TLLIPRCDGETVATFRFVCDPRLVECADIVTVKYYLGEADQDPGQAPNTA
TIGVARGSGENGTSTSSSGALEEFWGTGMYERNLTSAEVGSFLNVSSLTP
GLDYVFWSVWEHRNGSAPESNSRDFDLSRVQYWQCPGTTIERNFEVGTSL
SISLAVNGSTALVPLCGDPVSASSPDSSNTGPTSSSASSSSGSSSCQKVG
ADGVATETSGPSRRLSDAGDESHPSPALPARQGRSYRLLQEGQGANASLD
ETEGGAGWAWDSDGPIFGLGELSRIRLSSHVLLL
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