prot_Ecto-sp13_S_contig88098.20296.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig88098.20296.1
Unique Nameprot_Ecto-sp13_S_contig88098.20296.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length51
Homology
BLAST of mRNA_Ecto-sp13_S_contig88098.20296.1 vs. uniprot
Match: A0A6H5JZI5_9PHAE (ATP synthase subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZI5_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 9.710e-25
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
Query:    1 TGLKAVDALIPIGRGQRELVIGDRQTGKTAICIDTIINQKTKGDDLLYCV 50
            TGLKAVDALIPIGRGQRELVIGDRQTGKTAICIDTIINQKTKGDDLLYCV
Sbjct:  192 TGLKAVDALIPIGRGQRELVIGDRQTGKTAICIDTIINQKTKGDDLLYCV 241          
BLAST of mRNA_Ecto-sp13_S_contig88098.20296.1 vs. uniprot
Match: A0A6V2WS15_HETAK (ATP synthase subunit alpha n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2WS15_HETAK)

HSP 1 Score: 100 bits (248), Expect = 2.280e-23
Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = 0
Query:    1 TGLKAVDALIPIGRGQRELVIGDRQTGKTAICIDTIINQKTKGDDLLYCV 50
            TGLKAVDALIPIGRGQRELVIGDRQTGKTAI IDTIINQKTKGDDLLYC+
Sbjct:  189 TGLKAVDALIPIGRGQRELVIGDRQTGKTAIAIDTIINQKTKGDDLLYCI 238          
BLAST of mRNA_Ecto-sp13_S_contig88098.20296.1 vs. uniprot
Match: A0A836CH44_9STRA (ATP synthase subunit alpha n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH44_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.150e-23
Identity = 47/50 (94.00%), Postives = 49/50 (98.00%), Query Frame = 0
Query:    1 TGLKAVDALIPIGRGQRELVIGDRQTGKTAICIDTIINQKTKGDDLLYCV 50
            TGLKAVDALIPIGRGQREL+IGDRQTGKTAI IDTIINQKTKGDDLLYC+
Sbjct:  189 TGLKAVDALIPIGRGQRELIIGDRQTGKTAIAIDTIINQKTKGDDLLYCI 238          
BLAST of mRNA_Ecto-sp13_S_contig88098.20296.1 vs. uniprot
Match: F0YIV3_AURAN (ATP synthase subunit alpha n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIV3_AURAN)

HSP 1 Score: 94.7 bits (234), Expect = 1.700e-21
Identity = 45/50 (90.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:    1 TGLKAVDALIPIGRGQRELVIGDRQTGKTAICIDTIINQKTKGDDLLYCV 50
            TGLKAVDALIPIGRGQREL+IGDRQTGKTAI IDTIINQKTKGDD L C+
Sbjct:  140 TGLKAVDALIPIGRGQRELIIGDRQTGKTAIAIDTIINQKTKGDDALMCI 189          
BLAST of mRNA_Ecto-sp13_S_contig88098.20296.1 vs. uniprot
Match: A0A8J2SM38_9STRA (ATP synthase subunit alpha n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SM38_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.840e-21
Identity = 45/50 (90.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:    1 TGLKAVDALIPIGRGQRELVIGDRQTGKTAICIDTIINQKTKGDDLLYCV 50
            TGLKAVDALIPIGRGQREL+IGDRQTGKTAI IDTIINQKTKGDD L C+
Sbjct:  176 TGLKAVDALIPIGRGQRELIIGDRQTGKTAIAIDTIINQKTKGDDALMCI 225          
BLAST of mRNA_Ecto-sp13_S_contig88098.20296.1 vs. uniprot
Match: A0A7S2BTT7_9STRA (ATP synthase subunit alpha n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BTT7_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 4.870e-21
Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:    1 TGLKAVDALIPIGRGQRELVIGDRQTGKTAICIDTIINQKTKGDDLLYCV 50
            TGLK+VDALIPIGRGQREL+IGDRQTGKTAI IDTIINQKTKGDD L C+
Sbjct:  203 TGLKSVDALIPIGRGQRELIIGDRQTGKTAIAIDTIINQKTKGDDALMCI 252          
BLAST of mRNA_Ecto-sp13_S_contig88098.20296.1 vs. uniprot
Match: A0A7S2W4M6_9STRA (ATP synthase subunit alpha n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4M6_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 6.520e-21
Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:    1 TGLKAVDALIPIGRGQRELVIGDRQTGKTAICIDTIINQKTKGDDLLYCV 50
            TGLKAVDALIPIGRGQREL+IGDRQTGKTAI IDTIINQ+TKGDD L C+
Sbjct:  184 TGLKAVDALIPIGRGQRELIIGDRQTGKTAIAIDTIINQRTKGDDALKCI 233          
BLAST of mRNA_Ecto-sp13_S_contig88098.20296.1 vs. uniprot
Match: A0A7S0JM74_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Minchinia chitonis TaxID=262233 RepID=A0A7S0JM74_9EUKA)

HSP 1 Score: 85.5 bits (210), Expect = 1.670e-20
Identity = 42/46 (91.30%), Postives = 43/46 (93.48%), Query Frame = 0
Query:    1 TGLKAVDALIPIGRGQRELVIGDRQTGKTAICIDTIINQKTKGDDL 46
            TGLKAVDALIPIGRGQREL+IGDRQTGKTAI IDTIINQKTK D L
Sbjct:   48 TGLKAVDALIPIGRGQRELIIGDRQTGKTAIAIDTIINQKTKADPL 93          
BLAST of mRNA_Ecto-sp13_S_contig88098.20296.1 vs. uniprot
Match: A0A7R9W272_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W272_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 2.700e-19
Identity = 42/46 (91.30%), Postives = 43/46 (93.48%), Query Frame = 0
Query:    1 TGLKAVDALIPIGRGQRELVIGDRQTGKTAICIDTIINQKTKGDDL 46
            TGLKAVDALIPIGRGQREL+IGDRQTGKTAI IDTIINQKTK D L
Sbjct:   56 TGLKAVDALIPIGRGQRELIIGDRQTGKTAIAIDTIINQKTKADPL 101          
BLAST of mRNA_Ecto-sp13_S_contig88098.20296.1 vs. uniprot
Match: A0A6U4D8B6_9STRA (ATP synthase subunit alpha n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4D8B6_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.810e-19
Identity = 45/50 (90.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:    1 TGLKAVDALIPIGRGQRELVIGDRQTGKTAICIDTIINQKTKGDDLLYCV 50
            TGLKAVDALIPIGRGQRELVIGDRQTGKTAI IDTIINQKTK DD L+C+
Sbjct:  182 TGLKAVDALIPIGRGQRELVIGDRQTGKTAIAIDTIINQKTK-DDPLFCI 230          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig88098.20296.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZI5_9PHAE9.710e-25100.00ATP synthase subunit alpha n=2 Tax=Ectocarpus TaxI... [more]
A0A6V2WS15_HETAK2.280e-2396.00ATP synthase subunit alpha n=1 Tax=Heterosigma aka... [more]
A0A836CH44_9STRA3.150e-2394.00ATP synthase subunit alpha n=2 Tax=Tribonema minus... [more]
F0YIV3_AURAN1.700e-2190.00ATP synthase subunit alpha n=1 Tax=Aureococcus ano... [more]
A0A8J2SM38_9STRA1.840e-2190.00ATP synthase subunit alpha n=1 Tax=Pelagomonas cal... [more]
A0A7S2BTT7_9STRA4.870e-2188.00ATP synthase subunit alpha n=1 Tax=Dictyocha specu... [more]
A0A7S2W4M6_9STRA6.520e-2188.00ATP synthase subunit alpha n=1 Tax=Rhizochromulina... [more]
A0A7S0JM74_9EUKA1.670e-2091.30Hypothetical protein (Fragment) n=1 Tax=Minchinia ... [more]
A0A7R9W272_9STRA2.700e-1991.30Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A6U4D8B6_9STRA2.810e-1990.00ATP synthase subunit alpha n=1 Tax=Phaeomonas parv... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainPFAMPF00006ATP-synt_abcoord: 2..43
e-value: 5.3E-10
score: 39.3
NoneNo IPR availableGENE3D3.40.50.300coord: 1..50
e-value: 1.9E-17
score: 65.2
NoneNo IPR availablePANTHERPTHR43089F1 ATP SYNTHASE SUBUNIT ALPHAcoord: 1..50
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig88098contigEcto-sp13_S_contig88098:347..499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig88098.20296.1mRNA_Ecto-sp13_S_contig88098.20296.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig88098 347..499 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig88098.20296.1 ID=prot_Ecto-sp13_S_contig88098.20296.1|Name=mRNA_Ecto-sp13_S_contig88098.20296.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=51bp
TGLKAVDALIPIGRGQRELVIGDRQTGKTAICIDTIINQKTKGDDLLYCV
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000194ATPase_F1/V1/A1_a/bsu_nucl-bd
IPR027417P-loop_NTPase