prot_Ecto-sp13_S_contig12449.2029.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12449.2029.1
Unique Nameprot_Ecto-sp13_S_contig12449.2029.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length403
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12449.2029.1 vs. uniprot
Match: D7FX91_ECTSI (DUF4485 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX91_ECTSI)

HSP 1 Score: 587 bits (1514), Expect = 9.610e-208
Identity = 367/406 (90.39%), Postives = 374/406 (92.12%), Query Frame = 0 
Query:    1 SPCPPQLHDARRALMGSGRRNNAAHPSYESLDAFFCGCLERVEAAYATLNKAFK-IRVECWIAKLNGPYPLPNVAWRKNRNAFAALLARAVEEVDFREPFNRRPPEGSLPTLAPHLRARIPDRDPFRRSGSDFWLRHRAWLDTSRGLSTRDFANEAAEASRTFQPTRRGSPSLTSQDPLLASPGLQGGGHDAAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--RGPCGSRTTTSKRCPCDPLGKAGFEGGAGGAPRGGXXXXGVEAAGERVGCGHCGCDGERVRALQTMVREQALQLAALRLRQAYRGRAQAAKLQRVRHERCRLTSVRLEEMLARRGGREXXXXXXXXXXXASSSPRPPQLNPPLPGLSK 403
            SPCPPQLHDARRALMGSGRRNNAAHPSYESLDAFFCGCLERVEAAYATLNKAFK IRVECWIAKLNGPYPLPNVAWRKNRNAFAALLARAVEEVDFREPF+RRPPEGSLPTLAPHLRARIPDR+PF+R+GSDFWLRHRAWLDTSRGLS RDFANEAAEASRTFQPTRRGSPS TSQDP  ASPGLQGGGHDA  D     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  A  RGPCG+RTT SKRCPCDPLGKAGFEGGAGGAPRGG    GVEAAGERVGCGHCGCDGERVRALQTMVREQALQLAALRL+QAYRGRAQAA+LQRVRHERCRLTSVRLEEMLARRGGRE           ASSSPRPPQLNPPLPGLSK
Sbjct:    3 SPCPPQLHDARRALMGSGRRNNAAHPSYESLDAFFCGCLERVEAAYATLNKAFKKIRVECWIAKLNGPYPLPNVAWRKNRNAFAALLARAVEEVDFREPFDRRPPEGSLPTLAPHLRARIPDRNPFQRTGSDFWLRHRAWLDTSRGLSGRDFANEAAEASRTFQPTRRGSPSPTSQDPRFASPGLQGGGHDATADTTVIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAAARGPCGTRTTKSKRCPCDPLGKAGFEGGAGGAPRGGGTGGGVEAAGERVGCGHCGCDGERVRALQTMVREQALQLAALRLQQAYRGRAQAAELQRVRHERCRLTSVRLEEMLARRGGREQQNRQAEEDQDASSSPRPPQLNPPLPGLSK 408
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12449.2029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FX91_ECTSI9.610e-20890.39DUF4485 domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027831Domain of unknown function DUF4485PFAMPF14846DUF4485coord: 31..113
e-value: 5.0E-19
score: 68.1
NoneNo IPR availablePANTHERPTHR18871FAMILY NOT NAMEDcoord: 26..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12449contigEcto-sp13_S_contig12449:400..4702 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12449.2029.1mRNA_Ecto-sp13_S_contig12449.2029.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12449 400..4702 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12449.2029.1 ID=prot_Ecto-sp13_S_contig12449.2029.1|Name=mRNA_Ecto-sp13_S_contig12449.2029.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=403bp
SPCPPQLHDARRALMGSGRRNNAAHPSYESLDAFFCGCLERVEAAYATLN
KAFKIRVECWIAKLNGPYPLPNVAWRKNRNAFAALLARAVEEVDFREPFN
RRPPEGSLPTLAPHLRARIPDRDPFRRSGSDFWLRHRAWLDTSRGLSTRD
FANEAAEASRTFQPTRRGSPSLTSQDPLLASPGLQGGGHDAAGDTTVIGG
GITSGIATTAGGCCGATAAALSSPAPPPPPNPSSSRIHSGGGSGNNNAAP
CAAAARGPCGSRTTTSKRCPCDPLGKAGFEGGAGGAPRGGGAGGGVEAAG
ERVGCGHCGCDGERVRALQTMVREQALQLAALRLRQAYRGRAQAAKLQRV
RHERCRLTSVRLEEMLARRGGREEQNSQPEEEQDASSSPRPPQLNPPLPG
LSK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027831DUF4485