prot_Ecto-sp13_S_contig8806.20291.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8806.20291.1
Unique Nameprot_Ecto-sp13_S_contig8806.20291.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length645
Homology
BLAST of mRNA_Ecto-sp13_S_contig8806.20291.1 vs. uniprot
Match: D7FSR2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSR2_ECTSI)

HSP 1 Score: 603 bits (1556), Expect = 2.110e-205
Identity = 423/588 (71.94%), Postives = 427/588 (72.62%), Query Frame = 0
Query:   61 MRAYSPPVTRQRARAIILGQAAQRNRRXXXXXXXXXXXXXXXXXXXXXXXXXVRRREQEQGALEILPNGXXXXXXXXXXXXXXXXXSDGGRGERVASGGSPGSFSSSRTAGTRSESTVTVGNIASRWRRGGGRSNPSVEXXXXXXXXXXXXXXXXXXXSK-VAVAEATSGLGGQGVDGDXXXXVTSSSVAAASPGVPHSSSXXS-SQPLEEVNPSVLNAKDFSSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVALSGHSAAGAAVDGDPGNPDHGGVLPIPPPARGPSATP-GVARAVADRRDRGSSGGAVRGRSCAAVXXXXXXXXXXXGSPERGVXXXXXXXXXXXXXCDGGAGLGSRLNGKSVLAKGSTGVSPMQKRNRRELKLSEEETAMAGAPQGPVYQVAVLETGDFEPSPNPDEEMQAVRAASAGDGDWADLYSAVDSARRLCIFHAQKLLVPGGPGSRXXXXXXXXXXADGNLEGVVGLLAAAVGNLRSSMVRNALLGVGDVFRRVFLKHDVGRVDIRPMIAGTLQRLAGDKRFICQTAAQ 645
            MRAYSPPVTRQRARAIILGQAAQR+  XXXXXXXXXXXXX    X       VRRREQEQGA E LPNG                 SDGGR ERVASGGSPGSFSSSRTAGTRSEST TVGN ASRWRRGGGR NPSVE         XXXXXXXXXX   V  AEAT GLG QGVD D    V SSSVAAA PG P SS XX  SQPLEEVNPSVLNAKDFSSGSS                                                                 ALSG  A GAAVDGD  +P+HGGVLPIPPPARGPSAT  GVARAVADRRDR SSGGAVRGRSCA  XXXXXXX    GSPERGV        XXXXX    AGLGSRLNGKSVLAKGSTGVSPMQKRNRRELKLSEEETAMAGAPQGPVYQVAVLETGDFEPSPNPDEEMQAVRAASAGDGDWADLYSAVDSARRLCIFHAQKLLVPGG G  XXXXXXXXXXADGNLEGVVGLLAAAVGNLRSSMVRNALLGVGD+FR  FLKHDVGRVDI PMIAGTLQRLAGDKRFICQTAAQ
Sbjct:    1 MRAYSPPVTRQRARAIILGQAAQRSXXXXXXXXXXXXXXXGSRSXSRSSGGRVRRREQEQGASESLPNGAGAGGTGGGAEE-----SDGGRSERVASGGSPGSFSSSRTAGTRSESTATVGNTASRWRRGGGRRNPSVEAEVEITKGLXXXXXXXXXXXXXVXXAEATCGLGDQGVDADGDDGVASSSVAAAFPGAPRSSXXXXXSQPLEEVNPSVLNAKDFSSGSSSSGGVDAGADGKEGGSSVASTAPSSHHEPPRPSSQSDREDGGRPAIGGPRLLGGSTTAGAVPLPAALSGDGADGAAVDGDADSPNHGGVLPIPPPARGPSATAAGVARAVADRRDRSSSGGAVRGRSCAXXXXXXXXXGDMDGSPERGVKPPAAEAEXXXXXXX--AGLGSRLNGKSVLAKGSTGVSPMQKRNRRELKLSEEETAMAGAPQGPVYQVAVLETGDFEPSPNPDEEMQAVRAASAGDGDWADLYSAVDSARRLCIFHAQKLLVPGGQGGXXXXXXXXXXXADGNLEGVVGLLAAAVGNLRSSMVRNALLGVGDIFR--FLKHDVGRVDISPMIAGTLQRLAGDKRFICQTAAQ 579          
BLAST of mRNA_Ecto-sp13_S_contig8806.20291.1 vs. uniprot
Match: A0A7S3XLY7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLY7_HETAK)

HSP 1 Score: 93.6 bits (231), Expect = 1.970e-17
Identity = 78/195 (40.00%), Postives = 100/195 (51.28%), Query Frame = 0
Query:  457 LNGKSVLAKGSTGVSPMQKRNRRELKLSEEETAMAGAPQGPVYQVAVLETGDFEPSPNPDEEMQAVRAA---SAGDGDWADLYSAVDSARRLCIFHAQKLLVPGGPGSRXXXXXXXXXXADGNLEGVVGLLAAAVGNLRSSMVRNALLGVGDVFRRVFLKHDVGRVDIRPMIAGTLQRL-----AGDKRFICQTA 643
            L   S+ A  ++  S + KR +R LKLS EE AMAGAP+G VYQV VLE  D  P   P +++Q V  A   SA   DW D Y+AVD+ RRL I H+ + L+ GG                  L   + L     G+LRSSM RN+LL + D+F  V      G V   P +A TL  L      GDK+F+  TA
Sbjct:   50 LESVSLKALQASSPSILNKR-KRALKLSREEQAMAGAPEGNVYQVEVLERKDVPPPEAPQDDLQLVLLAAGPSAATLDWGDTYAAVDALRRLAI-HSPQTLLNGGAAV---------------LAAALQLTKEGAGSLRSSMARNSLLALEDLFDFVG-----GPVLGEPEVATTLVSLLLGLAGGDKKFLRGTA 222          
BLAST of mRNA_Ecto-sp13_S_contig8806.20291.1 vs. uniprot
Match: A0A835YTH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTH4_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 6.930e-13
Identity = 70/191 (36.65%), Postives = 89/191 (46.60%), Query Frame = 0
Query:  465 KGSTGVSPMQKRNRR---ELKLSEEETAMAGAPQGPVYQVAVLETGDFEPSPNPDEEMQAVRAASAGDG------DWADLYSAVDSARRLCIFHAQKLLVPGGPGSRXXXXXXXXXXADGNLEGVVGLLAAAVGNLRSSMVRNALLGVGDVFRRVFLKH-DVGRVDIRPMIAGTLQRLA-GDKRFICQTAA 644
            KGS G     +R RR   ELKLS EE+ M GAP GPVYQV VLET  F+ SP+  EE++ +              DWA+ YSA+DSARR+ I H   L  P                    L  V+ L+   V + RSS+ RNAL  + +V  RV           +   +A    R    DK+FI   AA
Sbjct:  258 KGSLGGGSGHRRARRAGVELKLSAEESRMKGAPVGPVYQVDVLETEHFDVSPDAAEELRLLLXXXXXXXXXXRREDWAEQYSAIDSARRMAIHHQALLHAPAA------------------LPAVLELVRQGVLSARSSLSRNALKALREVLTRVDAAALAAAAAPLAHAVAAAAARCGCADKKFIADEAA 430          
BLAST of mRNA_Ecto-sp13_S_contig8806.20291.1 vs. uniprot
Match: W7T7Y5_9STRA (Armadillo-like helical n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T7Y5_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 6.390e-6
Identity = 61/179 (34.08%), Postives = 81/179 (45.25%), Query Frame = 0
Query:  483 LSEEETAMAGAPQGPVYQVAVLETGDFEPSPNP----DEEMQAVRAASA------------GDGDWADLYSAVDSARRLCIFHA--QKLLVPGGPGSRXXXXXXXXXXADGNLEGVVGLLAAAVGNLRSSMVRNALLGVGDVFRRVFLKHDVGRVD---IRPMIAGTLQRLA-GDKRFI 639
            +S  E AM GAPQG VYQV V  T D  PS +P    D  ++ V+   A            G  DWA  Y  +D+ RRL +  +    LL P                   +L  ++  L  +V NLRSSM RNALL      R +F+   +G      + PM A  L++L  GDK+FI
Sbjct:  362 MSAAEKAMDGAPQGRVYQVQVRNTEDLPPSLHPALDLDLVLETVKEGDAALHGGQRGEEERGHADWAREYECIDAIRRLALHPSLGPALLRP-------------------HLPLLLPFLLRSVHNLRSSMQRNALL----CLRELFVPAGLGPAFPPFLEPMCALLLRQLGHGDKKFI 517          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8806.20291.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FSR2_ECTSI2.110e-20571.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3XLY7_HETAK1.970e-1740.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835YTH4_9STRA6.930e-1336.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7T7Y5_9STRA6.390e-634.08Armadillo-like helical n=1 Tax=Nannochloropsis gad... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8806contigEcto-sp13_S_contig8806:831..6466 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8806.20291.1mRNA_Ecto-sp13_S_contig8806.20291.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8806 831..6467 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8806.20291.1 ID=prot_Ecto-sp13_S_contig8806.20291.1|Name=mRNA_Ecto-sp13_S_contig8806.20291.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=645bp
EAASVFGGSTGLWYFSCFQRRTTTSRHHLGEREGQQPVQQEHTSFKSQPP
EAERLLRNRFMRAYSPPVTRQRARAIILGQAAQRNRREQPEQQGQARQAQ
RSSSSSASRGSRVRRREQEQGALEILPNGGGGGGGGGGTGGGAAEESDGG
RGERVASGGSPGSFSSSRTAGTRSESTVTVGNIASRWRRGGGRSNPSVEV
EVEITKGLGGGGGGGGGGSKVAVAEATSGLGGQGVDGDDGDDVTSSSVAA
ASPGVPHSSSSSSSQPLEEVNPSVLNAKDFSSGSSSGGGVDAGENGKEGG
GSGGSTAPSSHHEPPRPSSQSDREGGGRPAIGGPNLMGGSTTAVAVPPPV
ALSGHSAAGAAVDGDPGNPDHGGVLPIPPPARGPSATPGVARAVADRRDR
GSSGGAVRGRSCAAVAGGGGGGGDIDGSPERGVKPPAAAAEEEGGGCDGG
AGLGSRLNGKSVLAKGSTGVSPMQKRNRRELKLSEEETAMAGAPQGPVYQ
VAVLETGDFEPSPNPDEEMQAVRAASAGDGDWADLYSAVDSARRLCIFHA
QKLLVPGGPGSRGAGGSGDGGDADGNLEGVVGLLAAAVGNLRSSMVRNAL
LGVGDVFRRVFLKHDVGRVDIRPMIAGTLQRLAGDKRFICQTAAQ
back to top