mRNA_Ecto-sp13_S_contig12444.2027.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12444.2027.1 vs. uniprot
Match: A0A7S2UVW5_9STRA (Hypothetical protein n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2UVW5_9STRA) HSP 1 Score: 263 bits (673), Expect = 4.170e-88 Identity = 148/164 (90.24%), Postives = 156/164 (95.12%), Query Frame = 1
Query: 7 RRTPTKRAAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDKXXXXXXXFEEFLNMMTAKMSDKDTREDINKVFNLFDDDQTGHITLRNLKRVAKELGETMSDAELLEMIERADTDQDGEISAEEFYSIMTKKTFT 498
RRTP +R KTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDID XXXXXXXFEEFL+MMTAKMSDKDT+EDI KVFNLFDDDQTGHI++RNLKRVAKELGETMS+AELLEMIERADTD DG IS +EFY+IMTKKTFT
Sbjct: 2 RRTP-QRNKKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDXXXXXXXXFEEFLDMMTAKMSDKDTKEDIQKVFNLFDDDQTGHISIRNLKRVAKELGETMSEAELLEMIERADTDGDGVISPDEFYAIMTKKTFT 164
BLAST of mRNA_Ecto-sp13_S_contig12444.2027.1 vs. uniprot
Match: A0A485KUJ5_9STRA (Aste57867_11335 protein n=36 Tax=Stramenopiles TaxID=33634 RepID=A0A485KUJ5_9STRA) HSP 1 Score: 263 bits (673), Expect = 4.780e-88 Identity = 146/159 (91.82%), Postives = 153/159 (96.23%), Query Frame = 1
Query: 22 KRAAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDKXXXXXXXFEEFLNMMTAKMSDKDTREDINKVFNLFDDDQTGHITLRNLKRVAKELGETMSDAELLEMIERADTDQDGEISAEEFYSIMTKKTFT 498
KRA+KTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMI DID XXXXXXXFEEFL+MMTAKMSDKD+R+DI KVFNLFDDDQTG I+LRNLKRVAKELGETMSDAELLEMIERAD DQDGEI+ EEFY+IMTKKTFT
Sbjct: 10 KRASKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMIGDIDXXXXXXXXFEEFLDMMTAKMSDKDSRDDIQKVFNLFDDDQTGKISLRNLKRVAKELGETMSDAELLEMIERADGDQDGEINPEEFYAIMTKKTFT 168
BLAST of mRNA_Ecto-sp13_S_contig12444.2027.1 vs. uniprot
Match: A0A662XQ59_9STRA (Uncharacterized protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A662XQ59_9STRA) HSP 1 Score: 263 bits (673), Expect = 4.940e-88 Identity = 142/168 (84.52%), Postives = 150/168 (89.29%), Query Frame = 1
Query: 4 ARRTPTKRAAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDKXXXXXXXFEEFLNMMTAKM---SDKDTREDINKVFNLFDDDQTGHITLRNLKRVAKELGETMSDAELLEMIERADTDQDGEISAEEFYSIMTKKTFT 498
ARR KR AKTYERPGLSEEE+EEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMI DIDK FEEFL+MMTAKM SDKD+REDI KVFNLFDDDQ+G I+LRNLKRVAKELGETM+DAELLEMIERAD DQDGEI+AEEFY+IMTKKTFT
Sbjct: 2 ARRISQKRNAKTYERPGLSEEEVEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMIGDIDKDGSGSIDFEEFLDMMTAKMVGASDKDSREDIQKVFNLFDDDQSGKISLRNLKRVAKELGETMTDAELLEMIERADADQDGEINAEEFYAIMTKKTFT 169
BLAST of mRNA_Ecto-sp13_S_contig12444.2027.1 vs. uniprot
Match: A0A7S3K4A4_9STRA (Hypothetical protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=A0A7S3K4A4_9STRA) HSP 1 Score: 261 bits (668), Expect = 2.760e-87 Identity = 143/158 (90.51%), Postives = 151/158 (95.57%), Query Frame = 1
Query: 22 KRAAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDKXXXXXXXFEEFLNMMTAKMSDKDTREDINKVFNLFDDDQTGHITLRNLKRVAKELGETMSDAELLEMIERADTDQDGEISAEEFYSIMTKKTF 495
KR KTYERPGLSE+EIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDKXXXXXX FEEFL+MMTAKMSDKDTREDI KVFNLFDDDQ+G ITLRNLKRVAKELGETMSDAEL+EMIERADTD DG+I+ +EFY+IMTKKTF
Sbjct: 10 KRPYKTYERPGLSEDEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDKXXXXXXDFEEFLDMMTAKMSDKDTREDIQKVFNLFDDDQSGFITLRNLKRVAKELGETMSDAELMEMIERADTDNDGQINPDEFYAIMTKKTF 167
BLAST of mRNA_Ecto-sp13_S_contig12444.2027.1 vs. uniprot
Match: A0A836CPT7_9STRA (Calcium-dependent protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPT7_9STRA) HSP 1 Score: 256 bits (653), Expect = 6.100e-85 Identity = 137/164 (83.54%), Postives = 146/164 (89.02%), Query Frame = 1
Query: 7 RRTPT-KRAAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDKXXXXXXXFEEFLNMMTAKMSDKDTREDINKVFNLFDDDQTGHITLRNLKRVAKELGETMSDAELLEMIERADTDQDGEISAEEFYSIMTKKTF 495
RR P KRAAKTYERPGLSEEEIEEIREAFNLFDTDGSG+IDPKELKAAMQSLGFEAKNQTIYQMI+DIDK FEEFL+MMTAKMSDKDTREDI KVFNLFDDD TG I+L+NLKRVAKELGE M+DAELLEMIERAD D D EI+ +EFY+IMTKKTF
Sbjct: 8 RRAPQGKRAAKTYERPGLSEEEIEEIREAFNLFDTDGSGSIDPKELKAAMQSLGFEAKNQTIYQMIADIDKDSSGAIDFEEFLDMMTAKMSDKDTREDIQKVFNLFDDDHTGKISLKNLKRVAKELGENMTDAELLEMIERADADGDSEINPDEFYAIMTKKTF 171
BLAST of mRNA_Ecto-sp13_S_contig12444.2027.1 vs. uniprot
Match: A0A5A8CTE5_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CTE5_CAFRO) HSP 1 Score: 254 bits (649), Expect = 2.020e-84 Identity = 135/165 (81.82%), Postives = 147/165 (89.09%), Query Frame = 1
Query: 4 ARRTPTKRAAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDKXXXXXXXFEEFLNMMTAKMSDKDTREDINKVFNLFDDDQTGHITLRNLKRVAKELGETMSDAELLEMIERADTDQDGEISAEEFYSIMTKKTFT 498
ARR+P R + Y+RPGLSEEEIEEIREAFNLFDTDGSGTIDPKELK+AMQSLGFEAKN TIYQMI DIDK F+EFL+MMTAKMSDKDTREDI KVFNLFDDD +G I+LRNLKRVAKELGETM+DAEL+EMIERADTDQDGEI AEEFY+IMTKKTF+
Sbjct: 4 ARRSP--RRGRAYDRPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKSAMQSLGFEAKNATIYQMIGDIDKDGSGAIDFDEFLDMMTAKMSDKDTREDIVKVFNLFDDDGSGRISLRNLKRVAKELGETMTDAELMEMIERADTDQDGEIDAEEFYAIMTKKTFS 166
BLAST of mRNA_Ecto-sp13_S_contig12444.2027.1 vs. uniprot
Match: F0WRL3_9STRA (Calciumdependent protein 4 putative n=2 Tax=Albugo TaxID=65356 RepID=F0WRL3_9STRA) HSP 1 Score: 246 bits (629), Expect = 2.490e-81 Identity = 127/161 (78.88%), Postives = 142/161 (88.20%), Query Frame = 1
Query: 16 PTKRAAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDKXXXXXXXFEEFLNMMTAKMSDKDTREDINKVFNLFDDDQTGHITLRNLKRVAKELGETMSDAELLEMIERADTDQDGEISAEEFYSIMTKKTFT 498
P + K YERPG++++E+EEIREAFNLFDTDGSGTIDPKELK AMQSLGFEAKNQ IYQMI+DIDK F+EFL+MMTAKMSDK+TREDI KVF LFDDDQTG I+LRNLKRVA+ELGETMSDAELLEMIERADTDQDGEI +EFY+IMT+KTFT
Sbjct: 9 PQQSEKKIYERPGITQDEVEEIREAFNLFDTDGSGTIDPKELKTAMQSLGFEAKNQIIYQMIADIDKDGSGSIDFDEFLDMMTAKMSDKNTREDIQKVFALFDDDQTGKISLRNLKRVARELGETMSDAELLEMIERADTDQDGEIKPDEFYAIMTRKTFT 169
BLAST of mRNA_Ecto-sp13_S_contig12444.2027.1 vs. uniprot
Match: A0A812RM93_9DINO (Calmodulin n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812RM93_9DINO) HSP 1 Score: 237 bits (605), Expect = 4.550e-77 Identity = 129/164 (78.66%), Postives = 140/164 (85.37%), Query Frame = 1
Query: 4 ARRTPTKRAAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDKXXXXXXXFEEFLNMMTAKMSDKDTREDINKVFNLFDDDQTGHITLRNLKRVAKELGETMSDAELLEMIERADTDQDGEISAEEFYSIMTKKTF 495
ARR+P R + Y+RPGLSEEEIEEIREAFNLFDTDGSGTIDPKELK AM+SLGF+AKN TIYQMI DIDK F+EFL+MMT KMSDKDT EDI KVFNLFDDD TG I+LRNLKRVAKELGETM++AELLEMIERAD DQDGEIS +EF IMTKKTF
Sbjct: 49 ARRSP--RRGRAYDRPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKQAMKSLGFDAKNATIYQMILDIDKDGSGSIEFDEFLDMMTHKMSDKDTDEDIMKVFNLFDDDGTGKISLRNLKRVAKELGETMTEAELLEMIERADGDQDGEISPQEFRDIMTKKTF 210
BLAST of mRNA_Ecto-sp13_S_contig12444.2027.1 vs. uniprot
Match: A0A1R2C2Y3_9CILI (Uncharacterized protein n=8 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C2Y3_9CILI) HSP 1 Score: 236 bits (601), Expect = 5.780e-77 Identity = 117/154 (75.97%), Postives = 140/154 (90.91%), Query Frame = 1
Query: 34 KTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDKXXXXXXXFEEFLNMMTAKMSDKDTREDINKVFNLFDDDQTGHITLRNLKRVAKELGETMSDAELLEMIERADTDQDGEISAEEFYSIMTKKTF 495
K YERPGL+E+EIEEI+EAF+LFD+DGSGTIDP ELK+AMQSLGFEAKNQTIYQMISD+DK F+EFL+MMTA+MSDKDT+EDINKVF LFDDD+TG+IT++NL+RVAKELGETM+D EL+EMIERAD+D DG++S E+FY+IMTKK F
Sbjct: 22 KQYERPGLTEDEIEEIKEAFDLFDSDGSGTIDPAELKSAMQSLGFEAKNQTIYQMISDLDKDGSGAIDFDEFLDMMTARMSDKDTKEDINKVFRLFDDDKTGYITIKNLRRVAKELGETMTDEELMEMIERADSDGDGQVSTEDFYNIMTKKAF 175
BLAST of mRNA_Ecto-sp13_S_contig12444.2027.1 vs. uniprot
Match: A0A078B9B5_STYLE (Calciumdependent protein 4 n=7 Tax=Spirotrichea TaxID=33829 RepID=A0A078B9B5_STYLE) HSP 1 Score: 232 bits (591), Expect = 1.380e-75 Identity = 120/164 (73.17%), Postives = 144/164 (87.80%), Query Frame = 1
Query: 4 ARRTPTKRAAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDKXXXXXXXFEEFLNMMTAKMSDKDTREDINKVFNLFDDDQTGHITLRNLKRVAKELGETMSDAELLEMIERADTDQDGEISAEEFYSIMTKKTF 495
A+R+ K AK YERPGL+E+EIEEI+EAF+LFDTDGSG+IDPKELKAAMQSLGFEAKNQTI+QMISD+DK FEEFL+MMTA+MSDKDTREDI+KVF LFDDD TG ITLRNL+RVA+ELGETM+D EL EMI+RAD++ DG ++ ++F++IMTKKTF
Sbjct: 2 AQRSRPKFNAKKYERPGLTEDEIEEIKEAFDLFDTDGSGSIDPKELKAAMQSLGFEAKNQTIFQMISDLDKNKSGTIDFEEFLDMMTARMSDKDTREDISKVFRLFDDDNTGTITLRNLRRVARELGETMTDEELQEMIDRADSNGDGAVTLDDFFNIMTKKTF 165 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12444.2027.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12444.2027.1 >prot_Ecto-sp13_S_contig12444.2027.1 ID=prot_Ecto-sp13_S_contig12444.2027.1|Name=mRNA_Ecto-sp13_S_contig12444.2027.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=167bp QARRTPTKRAAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAback to top mRNA from alignment at Ecto-sp13_S_contig12444:2672..4605+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12444.2027.1 ID=mRNA_Ecto-sp13_S_contig12444.2027.1|Name=mRNA_Ecto-sp13_S_contig12444.2027.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1934bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12444:2672..4605+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12444:2672..4605+ >mRNA_Ecto-sp13_S_contig12444.2027.1 ID=mRNA_Ecto-sp13_S_contig12444.2027.1|Name=mRNA_Ecto-sp13_S_contig12444.2027.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=501bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12444:2672..4605+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |