prot_Ecto-sp13_S_contig87922.20269.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig87922.20269.1
Unique Nameprot_Ecto-sp13_S_contig87922.20269.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length64
Homology
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BLAST of mRNA_Ecto-sp13_S_contig87922.20269.1 vs. uniprot
Match: D7FGU0_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU0_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 1.700e-30
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0 
Query:    6 SRYSKAGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNV 63
            SRYSKAGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNV
Sbjct:   72 SRYSKAGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNV 129
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BLAST of mRNA_Ecto-sp13_S_contig87922.20269.1 vs. uniprot
Match: D7G5Y0_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y0_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 6.210e-30
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 
Query:    8 YSKAGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNV 63
            YSKAGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNV
Sbjct:    7 YSKAGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNV 62
[Close]
BLAST of mRNA_Ecto-sp13_S_contig87922.20269.1 vs. uniprot
Match: D7G4G6_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G6_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 5.060e-29
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0 
Query:    6 SRYSKAGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNV 63
            SRYSKAGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNV
Sbjct:  640 SRYSKAGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNV 697
[Close]
BLAST of mRNA_Ecto-sp13_S_contig87922.20269.1 vs. uniprot
Match: A0A6H5K5W1_9PHAE (Telomerase reverse transcriptase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W1_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.660e-28
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0 
Query:    6 SRYSKAGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNV 63
            SRYSK GVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNV
Sbjct:  441 SRYSKTGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNV 498
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig87922.20269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FGU0_ECTSI1.700e-30100.00Telomerase reverse transcriptase n=1 Tax=Ectocarpu... [more]
D7G5Y0_ECTSI6.210e-30100.00Telomerase reverse transcriptase n=1 Tax=Ectocarpu... [more]
D7G4G6_ECTSI5.060e-29100.00Telomerase reverse transcriptase n=1 Tax=Ectocarpu... [more]
A0A6H5K5W1_9PHAE1.660e-2898.28Telomerase reverse transcriptase n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig87922contigEcto-sp13_S_contig87922:43..234 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig87922.20269.1mRNA_Ecto-sp13_S_contig87922.20269.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig87922 43..234 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig87922.20269.1 ID=prot_Ecto-sp13_S_contig87922.20269.1|Name=mRNA_Ecto-sp13_S_contig87922.20269.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=64bp
LPASASRYSKAGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEH
LGINSRNTVLLNV*
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