prot_Ecto-sp13_S_contig1244.2025.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1244.2025.1
Unique Nameprot_Ecto-sp13_S_contig1244.2025.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length384
Homology
BLAST of mRNA_Ecto-sp13_S_contig1244.2025.1 vs. uniprot
Match: D7FNX2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX2_ECTSI)

HSP 1 Score: 700 bits (1807), Expect = 2.690e-250
Identity = 352/382 (92.15%), Postives = 361/382 (94.50%), Query Frame = 0
Query:    1 MGLVAVTLNSLLWVLSLPWVAWRLVCWVSYEFANEGDDDEDEETIAPGKRGKLRESLLALGTIAACLLALLFAAALCGACIVGSFFLWFRGVWNVWEWVRWRRCEEGKFVSGETEHECPTAMPGQEHGQNWRHAWQHVAKARNFRIRHEHGSEHFHVAPLLQSTTGLDMKRLCSLAKKKYSDRRQKEPGDAPGEEENGMGFEGLDDLGLDPAGGSASRTQMDEAPGGSGSSTFLSPDFETKVAEFLSTVTTRMREHISATENDWGEHNYAPITPSPPDMRQQQGREWVHNGIQVPSFGGGGVRTDRDGTAVFSRGGGEERGRMAKVDVESTESIISGDGSTSNTSDTDLPETVVLPPVCALGSPQRRMHLLGSMEGSSRRTT 382
            MGLVAV LNSLLWVLSLPWVAWRLVCWVSYEFANEGDDDEDEET AP KRGKLRESLLALGTIAAC LALLFAAALCGACIVGSFFLWFRGVWNVWEWVRWRR EEGKFVSGET+ ECPTAMPGQEHGQNWRHAWQHVAKARN RIRHEHGSEHFHVAPLLQSTTGLDMKRLCSLAKKKYSDRRQKEPGDAPGEE NGMGFEGLDDLGLDPAGGS SR QMDEAP GSG+STFLSPDFETKVAEFLSTVTT MRE+ +ATENDWGE  YAP +PSPPDMRQQQGREWVHNGI+VPS GGGGVRTDRDGTAVF RGGGEE+GR A+VD ESTESII+ DGSTSNTSDTDLPETVVLPPVCALGSPQRRMHLLGSMEGSSRRTT
Sbjct:  214 MGLVAVALNSLLWVLSLPWVAWRLVCWVSYEFANEGDDDEDEETNAPVKRGKLRESLLALGTIAACWLALLFAAALCGACIVGSFFLWFRGVWNVWEWVRWRRSEEGKFVSGETDQECPTAMPGQEHGQNWRHAWQHVAKARNLRIRHEHGSEHFHVAPLLQSTTGLDMKRLCSLAKKKYSDRRQKEPGDAPGEEGNGMGFEGLDDLGLDPAGGSVSRIQMDEAPRGSGTSTFLSPDFETKVAEFLSTVTTGMRENTAATENDWGEQKYAPTSPSPPDMRQQQGREWVHNGIEVPSLGGGGVRTDRDGTAVFPRGGGEEQGRTARVDDESTESIITDDGSTSNTSDTDLPETVVLPPVCALGSPQRRMHLLGSMEGSSRRTT 595          
BLAST of mRNA_Ecto-sp13_S_contig1244.2025.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 5.140e-76
Identity = 142/224 (63.39%), Postives = 166/224 (74.11%), Query Frame = 0
Query:    1 MGLVAVTLNSLLWVLSLPWVAWRLVCWVSYEFANEGDDDEDEETIAP---GKRGKLRESLLALGTIAACLLALLFAAALCGACIVGSFFLWFRGVWNVWEWVRWRRCEEGKFVSGETEH-ECPTAMPGQEHGQNWRHAWQHVAKARNFRIRHEHGSEHFHVAPLLQSTTGLDMKRLCSLAKKKYSDRRQKEPGDAPGEEENGMGFEGLDDLGLDPAGGSASRTQ 220
            MGLVAVTLN+LLWVLSLPWVAWR+VCWV Y+    GD DE E  ++     K+GK R  L     I AC+ AL FA ALCG C+ GSF LW RGV NV+EW  WR  EEG+FVSGET+   CPTAMPGQE G NWRHAW++VAKARNFRIRHEH SEHFHVAPLLQ+TTGLDM++ C LAK+K++D+ Q+   D+P   +  +G  GLDDL LD  GGS SRTQ
Sbjct: 1387 MGLVAVTLNALLWVLSLPWVAWRIVCWVLYKVVETGDPDEVETFLSVRLRDKKGKFRAFLWVFLGIIACVFALGFAVALCGVCVAGSFVLWLRGVCNVFEWAHWRLSEEGRFVSGETKKGTCPTAMPGQERGSNWRHAWKYVAKARNFRIRHEHDSEHFHVAPLLQATTGLDMEQFCLLAKEKFNDKNQEHWADSPSAGKC-VGGGGLDDLELDAGGGSVSRTQ 1609          
BLAST of mRNA_Ecto-sp13_S_contig1244.2025.1 vs. uniprot
Match: A0A6H5JA22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA22_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 1.180e-41
Identity = 82/129 (63.57%), Postives = 92/129 (71.32%), Query Frame = 0
Query:  253 MREHISATENDWGEHNYAPITPSPPDMRQQQGREWVHNGIQVPSFGGGGVRTDRDGTAVFSRGGGEERGRMAKVDVESTESIISGDGSTSNTSDTDLPETVVLPPVCALGSPQRRMHLLGSMEGSSRRT 381
            MRE+ +ATEND GE  +AP TP+  D+ QQQ R W H GIQVP FGG  V TDRDGTAVF RGGG E+G     D E TES ISGDG  S   D+DLPE + LPPVC  GSPQR M+LLGSM+GSSR T
Sbjct:    1 MRENTAATENDGGEEKFAPTTPTSHDLGQQQDRGWTHKGIQVPYFGGEEVSTDRDGTAVFPRGGGAEKGSTDSPDNEPTESSISGDGGKS---DSDLPEILELPPVCERGSPQRGMNLLGSMDGSSRGT 126          
BLAST of mRNA_Ecto-sp13_S_contig1244.2025.1 vs. uniprot
Match: D8LH98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH98_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 3.440e-15
Identity = 62/201 (30.85%), Postives = 96/201 (47.76%), Query Frame = 0
Query:    1 MGLVAVTLNSLLWVLSLPWVAWRLV-------------------------CWVSYEFANEGDDDEDEETIAPGKRGKLRESLLALGTIAACLLALLFAAALCGACIVGSFFLWFRGVWNVWEWVRWRRCEEGKFVSGETEHECPTAMPGQEHGQNWRHAWQHVAKARNFRIRHEHGSEHFHVAPLLQSTTGLDMKRLCSLA 176
            MG  ++ + ++LW+ S+PWVAW  +                         CW   +  N   ++E+  +      G +RE L  +  +   ++++ FAA  C   IVGS  LW  G + +  W  W  C      S + + + P AMPGQE G +W +AW+ +A  RN  IR +    HF+V P L+S TGLDM+ L  +A
Sbjct:  268 MGGASLVVFTMLWIFSVPWVAWCFLRSLLPPEDGEEGFHLDTIKMIKTCSCWKGGKGVNIRSEEENNSSP-----GYVRELLWVVCALVVMMVSMAFAAVFCLLYIVGSGILWILGTFRLLVWG-WNNC------SRKRDDKNPEAMPGQEDGSHWENAWK-LANLRNHGIREDREHPHFYVVPFLKSKTGLDMQHLARMA 455          
BLAST of mRNA_Ecto-sp13_S_contig1244.2025.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 4.510e-11
Identity = 62/207 (29.95%), Postives = 91/207 (43.96%), Query Frame = 0
Query:    2 GLVAVTLNSLLWVLSLPWVAW---RLVCWVSYE---------------FANEGDDDEDEETIAPGKR--------GKLRESLLALGTIAACLLALLFAAALCGACIVGSFFLWFRGVWNVWEWVRWRRCEEGKFVSGETEHECPTAMPGQEHGQNWRHAWQHVAKARNFRIRHEHGSEHFHVAPLLQSTTGLDMKRLCSLAKKKYSD 182
            G+ AV L+++LW++S+PWVAW   RLV     E                  E DD                    G  R  L  + ++ + L+A++ A+ LC   I  +  LW  G+                    +   + P  MPGQE G +W+ AW+ +A  RN   R   G  HFH+APLL+S TGLDM+ L  L K ++ +
Sbjct: 1400 GVAAVGLSTILWIVSVPWVAWCLHRLVHKAEEETXXXXXXXXXXXXXXXXXERDDGXXXXXXXXXXXXXKEKPHLGYFRRFLSGIKSMCSLLVAMVAASFLCLLYIFATMILWAVGIXXX--------XXXXXXXXDKKNGDMPEPMPGQEDGHHWKRAWE-LASLRNQGARANRGQAHFHIAPLLKSKTGLDMQHLAQLTKNRHDE 1597          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1244.2025.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FNX2_ECTSI2.690e-25092.15Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JB40_9PHAE5.140e-7663.39Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JA22_9PHAE1.180e-4163.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH98_ECTSI3.440e-1530.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LH99_ECTSI4.510e-1129.95Ankyrin Repeat Transient Receptor Potential Channe... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..89
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..56
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..383
NoneNo IPR availableTMHMMTMhelixcoord: 57..79
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1244contigEcto-sp13_S_contig1244:15008..16865 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1244.2025.1mRNA_Ecto-sp13_S_contig1244.2025.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1244 13300..18247 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1244.2025.1 ID=prot_Ecto-sp13_S_contig1244.2025.1|Name=mRNA_Ecto-sp13_S_contig1244.2025.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=384bp
MGLVAVTLNSLLWVLSLPWVAWRLVCWVSYEFANEGDDDEDEETIAPGKR
GKLRESLLALGTIAACLLALLFAAALCGACIVGSFFLWFRGVWNVWEWVR
WRRCEEGKFVSGETEHECPTAMPGQEHGQNWRHAWQHVAKARNFRIRHEH
GSEHFHVAPLLQSTTGLDMKRLCSLAKKKYSDRRQKEPGDAPGEEENGMG
FEGLDDLGLDPAGGSASRTQMDEAPGGSGSSTFLSPDFETKVAEFLSTVT
TRMREHISATENDWGEHNYAPITPSPPDMRQQQGREWVHNGIQVPSFGGG
GVRTDRDGTAVFSRGGGEERGRMAKVDVESTESIISGDGSTSNTSDTDLP
ETVVLPPVCALGSPQRRMHLLGSMEGSSRRTTA*
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