prot_Ecto-sp13_S_contig878.20253.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig878.20253.1
Unique Nameprot_Ecto-sp13_S_contig878.20253.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length182
Homology
BLAST of mRNA_Ecto-sp13_S_contig878.20253.1 vs. uniprot
Match: D8LEJ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEJ2_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 5.850e-112
Identity = 168/178 (94.38%), Postives = 171/178 (96.07%), Query Frame = 0
Query:    1 MAHALRTGLLGVASRGTVRNFSAWLALALVALIAGVCDAFVAPSASLPLAGGSAVSKNDGHSRGCSTRPNGSGSGSLSMSADGSATKGEPAKLAAVVYTYVDGMVDKRGPYRTDHLDLLKAMTEEGTCLLGGAFLEPCDGAVLLFSSPEKAQQFVDKDPYNTGGLVTKYQVLYFRKVL 178
            MAHALRTGLLGVASRGTVRNFSAWLALALVAL AGVCDAFVAPSASLPLAGGSAVSK DGHSRGCSTRPN SGSGSLSMSADGSATKGEPAKLAAVVYTYVDGMVDKRGPYRTDHLDLLKAMTEEGTCLLGGAFLEPCDGAVLLFSSPEKAQQFVDKDPYNTGGLVTKYQ+  +  V+
Sbjct:    1 MAHALRTGLLGVASRGTVRNFSAWLALALVALTAGVCDAFVAPSASLPLAGGSAVSKIDGHSRGCSTRPNSSGSGSLSMSADGSATKGEPAKLAAVVYTYVDGMVDKRGPYRTDHLDLLKAMTEEGTCLLGGAFLEPCDGAVLLFSSPEKAQQFVDKDPYNTGGLVTKYQIRDYMAVV 178          
BLAST of mRNA_Ecto-sp13_S_contig878.20253.1 vs. uniprot
Match: A0A835ZJU7_9STRA (YCII domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJU7_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 4.180e-22
Identity = 39/81 (48.15%), Postives = 60/81 (74.07%), Query Frame = 0
Query:   91 AKLAAVVYTYVDGMVDKRGPYRTDHLDLLKAMTEEGTCLLGGAFLEPCDGAVLLFSSPEKAQQFVDKDPYNTGGLVTKYQV 171
            ++L  + YTYV+GM++KRGP+R  HL +L  +T++G C+LGGAF+ P DGA+LLF +   A+ F  +DPY+  GL+TK+ +
Sbjct:    1 SQLYMLQYTYVEGMLEKRGPHRDAHLQMLGELTQKGECVLGGAFMNPADGAMLLFQTRAAAETFAAQDPYSKAGLITKFNI 81          
BLAST of mRNA_Ecto-sp13_S_contig878.20253.1 vs. uniprot
Match: A0A7S3JUF8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUF8_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 9.410e-21
Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 0
Query:   90 PAKLAAVVYTYVDGMVDKRGPYRTDHLDLLKAMTEEGTCLLGGAFLEPCDGAVLLFSSP----EKAQQFVDKDPYNTGGLVTKYQVLYFRKVL 178
            P K  A+ YTYVDGM++KR PYR  HLD LK M + G C+LGGAF +PCDGAV+LF S     E+ + F + DPY    LV  + V  +  V+
Sbjct:   51 PVKFYALRYTYVDGMLEKRQPYRQAHLDGLKKMADLGKCVLGGAFNDPCDGAVVLFDSSTTTKEEIEAFANVDPYVVNNLVPSWSVSEYMAVV 143          
BLAST of mRNA_Ecto-sp13_S_contig878.20253.1 vs. uniprot
Match: A0A6S9EHW5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9EHW5_HETAK)

HSP 1 Score: 91.7 bits (226), Expect = 2.260e-20
Identity = 41/82 (50.00%), Postives = 55/82 (67.07%), Query Frame = 0
Query:   90 PAKLAAVVYTYVDGMVDKRGPYRTDHLDLLKAMTEEGTCLLGGAFLEPCDGAVLLFSSPEKAQQFVDKDPYNTGGLVTKYQV 171
            P KL AV YTYV+ M ++RG  R  HL+L+K     GTC++GGAF+EP DG  LLF + E A++FV +DPY   GLV  + +
Sbjct:   50 PKKLFAVRYTYVENMEERRGAVRAPHLELIKEYEAAGTCVMGGAFIEPVDGGFLLFETEEAAREFVSRDPYVEAGLVPHHDI 131          
BLAST of mRNA_Ecto-sp13_S_contig878.20253.1 vs. uniprot
Match: A0A3B9ZKB7_9BACT (YCII domain-containing protein n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=A0A3B9ZKB7_9BACT)

HSP 1 Score: 80.9 bits (198), Expect = 8.580e-17
Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = 0
Query:   98 YTYVDGMVDKRGPYRTDHLDLLKAMTEEGTCLLGGAFLEPCDGAVLLFS--SPEKAQQFVDKDPYNTGGLVTKYQVLYFRKVLDG 180
            Y  VD  +++R PYRT+HL L +   + G+  +GGA  +P DGAVL+F   +PE A+QF   DPY   GL+T +QV  +  V+ G
Sbjct:    7 YKTVDNYIERRAPYRTEHLGLAQQAVDNGSLFMGGALADPADGAVLIFKGDTPEVAEQFAKNDPYVKNGLITDWQVRPWMVVIGG 91          
BLAST of mRNA_Ecto-sp13_S_contig878.20253.1 vs. uniprot
Match: UPI001CCD5961 (YciI-like protein n=1 Tax=unclassified Psychroflexus TaxID=196864 RepID=UPI001CCD5961)

HSP 1 Score: 79.7 bits (195), Expect = 2.340e-16
Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 0
Query:   98 YTYVDGMVDKRGPYRTDHLDLLKAMTEEGTCLLGGAFLEPCDGAVLLFSS--PEKAQQFVDKDPYNTGGLVTKYQVLYFRKVLDG 180
            Y  VD  ++KR P+R +HL+LLK   E+GT ++ GAF EP DG V +F +  P  A+ F   DPY   GL+T++++  +  V+ G
Sbjct:    7 YKSVDNYIEKRAPFRQEHLELLKTANEQGTLVMAGAFSEPADGGVFIFKTNDPSVAENFAKNDPYVKNGLITEWKIRPWTVVIGG 91          
BLAST of mRNA_Ecto-sp13_S_contig878.20253.1 vs. uniprot
Match: A0A7S1UAB8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAB8_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.080e-15
Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = 0
Query:   89 EPAKLAAVVYTYVDGMVDKRGPYRTDHLDLLKAMTEEGTCLLGGAFLEPCDGAVLLFSSPE----KAQQFVDKDPYNTGGLVTKYQVLYFRKV 177
            +P K   + YTYV+ M+++RGPYR +HL   KA +E+G C + GA+ +PCDGAVLLF++ +      + F   DPY T GL  ++ V+++  V
Sbjct:   67 KPIKYIVLRYTYVENMLERRGPYRAEHLANAKAASEKGWCAIAGAY-DPCDGAVLLFNADKCSVADVENFAKADPYVTAGLA-QWNVVHYNAV 157          
BLAST of mRNA_Ecto-sp13_S_contig878.20253.1 vs. uniprot
Match: A0A7R9YBW9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBW9_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.120e-15
Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 0
Query:   90 PAKLAAVVYTYVDGMVDKRGPYRTDHLDLLKAMTEEGTCLLGGAFLEPCDGAVLLFS----SPEKAQQFVDKDPYNTGGLVTKYQVLYFRKV 177
            P    A+ Y+YV GM++KRGPYR  HL  ++ ++E+G   + GA+  PCDGAV LF     + E+ + FV  DPY   GLVT ++V+ +  V
Sbjct:   42 PQAFLALRYSYVPGMLEKRGPYREGHLKAIQVLSEQGKVAIAGAYT-PCDGAVFLFHPDQITEEEIEAFVRSDPYVENGLVTAWEVVNYTAV 132          
BLAST of mRNA_Ecto-sp13_S_contig878.20253.1 vs. uniprot
Match: A0A061S644_9CHLO (Ycii-related protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S644_9CHLO)

HSP 1 Score: 79.0 bits (193), Expect = 1.140e-15
Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = 0
Query:   85 ATKGEPAKLAAVVYTYVDGMVDKRGPYRTDHLDLLKAMTEEGTCLLGGAFLEPCDGAVLLFS--SPEKAQQFVDKDPYNTGGLVTKYQVLYFRKVLD 179
            AT  +P     + Y YV+ +V+KRGPYR +HL       EEG  ++GG  ++P DGAV ++   +P + +QFV  DPY   GLV ++ +  F  V+ 
Sbjct:   29 ATSAQPPTYTLLTYEYVEDIVEKRGPYRQEHLAAAFKKQEEGKLVVGGPHIDPIDGAVFIWKDVTPAEIEQFVQDDPYVVNGLVPRWSIRQFLGVVS 125          
BLAST of mRNA_Ecto-sp13_S_contig878.20253.1 vs. uniprot
Match: UPI000833C2E6 (YciI-like protein n=1 Tax=Sulfurospirillum sp. UCH001 TaxID=1581011 RepID=UPI000833C2E6)

HSP 1 Score: 77.4 bits (189), Expect = 1.940e-15
Identity = 38/83 (45.78%), Postives = 50/83 (60.24%), Query Frame = 0
Query:   98 YTYVDGMVDKRGPYRTDHLDLLKAMTEEGTCLLGGAFLEPCDGAVLLFSSPEKAQ--QFVDKDPYNTGGLVTKYQVLYFRKVL 178
            Y YVD +++KR P+R  HL L  +  E G  LLGGAF  P DGA+L+F    KAQ   FV +DPY   GLVT + +  +  V+
Sbjct:    7 YNYVDNIIEKRVPFREAHLALATSFVESGELLLGGAFANPADGAILIFKVENKAQVEAFVKQDPYVQNGLVTSWNIREWSVVV 89          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig878.20253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEJ2_ECTSI5.850e-11294.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZJU7_9STRA4.180e-2248.15YCII domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S3JUF8_9STRA9.410e-2149.46Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6S9EHW5_HETAK2.260e-2050.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A3B9ZKB7_9BACT8.580e-1743.53YCII domain-containing protein n=1 Tax=Prolixibact... [more]
UPI001CCD59612.340e-1641.18YciI-like protein n=1 Tax=unclassified Psychroflex... [more]
A0A7S1UAB8_9STRA1.080e-1541.94Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7R9YBW9_9STRA1.120e-1542.39Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A061S644_9CHLO1.140e-1538.14Ycii-related protein n=1 Tax=Tetraselmis sp. GSL01... [more]
UPI000833C2E61.940e-1545.78YciI-like protein n=1 Tax=Sulfurospirillum sp. UCH... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005545YCII-relatedPFAMPF03795YCIIcoord: 98..174
e-value: 4.8E-5
score: 23.7
NoneNo IPR availableGENE3D3.30.70.1060coord: 91..178
e-value: 5.7E-11
score: 44.5
NoneNo IPR availablePANTHERPTHR33606FAMILY NOT NAMEDcoord: 74..175
NoneNo IPR availablePANTHERPTHR33606:SF4coord: 74..175
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 35..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 23..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..181
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 95..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig878contigEcto-sp13_S_contig878:18432..20493 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig878.20253.1mRNA_Ecto-sp13_S_contig878.20253.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig878 18432..20493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig878.20253.1 ID=prot_Ecto-sp13_S_contig878.20253.1|Name=mRNA_Ecto-sp13_S_contig878.20253.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp
MAHALRTGLLGVASRGTVRNFSAWLALALVALIAGVCDAFVAPSASLPLA
GGSAVSKNDGHSRGCSTRPNGSGSGSLSMSADGSATKGEPAKLAAVVYTY
VDGMVDKRGPYRTDHLDLLKAMTEEGTCLLGGAFLEPCDGAVLLFSSPEK
AQQFVDKDPYNTGGLVTKYQVLYFRKVLDGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005545YCII
IPR011008Dimeric_a/b-barrel