prot_Ecto-sp13_S_contig8776.20246.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8776.20246.1
Unique Nameprot_Ecto-sp13_S_contig8776.20246.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length758
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8776.20246.1 vs. uniprot
Match: D7G5C7_ECTSI (Chorein N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C7_ECTSI)

HSP 1 Score: 1395 bits (3611), Expect = 0.000e+0
Identity = 722/759 (95.13%), Postives = 742/759 (97.76%), Query Frame = 0 
Query:    1 MTSFIERKVNEICGRWLDGFTKDNVDVSLLQAKITLSDLHFKTDELCLLSPTFAPSFFYVGKLSIDIPLAWNFSRPVKMAVSDVLGVIRVCDHGSMQAEDARRSISANVHVKAILSKLVDELGGGGADEGKRQARMNLQTAYNLHKVMQKLEVTVKNAHVRVEEPRREVNDKSSSRRGSSLPAVAFGVCLRGISLGIDEAA-VEADGGLAGESWLGKKFRAMESALLGNISRYDAVDGALNAHSNEQRDAQAHGRGDAGSDGVDDTSGEQAASDESTTSSTLAVTKFASVRGASVYFCRDEECYSATDREETLRRLREDLRSPPAALPPLLKRCRGGVGLRVVLSAKEWGKIESMDVRLLAGDINVQVGDDQLGYLLRWASLLNGHMRTLALSALRPARDLVPATLPSDSSGRSGKSRYYRAMWRLAVGVVLRDLRSSAWQRSENARNNLQSAQAARSEIFDRPWSTEESEYRAARGLLWRTWFAEWVGAARYLSLRQLLQSRLVVENFSDKSGGIHNRLYEDLEVQSSTQKVTKSSGATGKRTGERKLARYIMPWGLPQEDVHKAWGLINRKTRRWELREAGGFKLAIDEERADQGQLDPSVLQALWSIQLQLDAQLPHRVCAFARRMAFLRVGWRSRIDKLWQARAEKQRRLGLGVGDPPAPPRLTPNDSISFTASEAGFMGLSEADSSEAAESTVVEEAGDGADRVGTLLVRMGQLDGVGGVGLLSLAPKAIATLMLEESSATLEEMNLETNSTEV 758
            MTSFIERKVNEICGRWLDGFTKDNVDVSLLQAKITLSDLHFKTDELCLLSPTFAPSFFYVGKLSIDIPLAWNFSRPVKMAVSDVLGVIRVCDHGSMQAEDARRSISANVHVKAILSKL DELGGGGADEGKR ARMNLQTAYNLHKVM+KLEVTVKNAHVRVEEPRREVND+SSS +GSS PAVAFGVCLRGISLG+DEAA VEADGGLAG  WLGKKFRAME+ALLGNISRYDAVDGAL+AHSNEQRDAQAHGR D GSDGVDDTSGE+AASDESTTSSTLAVTKFASVRGASVYFCRDEECYSATDREETLRRLREDLRSPPAALPPLL+RCRGGVGLRVVLSAKEWGKIESMD+RLL GDIN+QVGDDQLGYLLRWASLLNGHMRTLALSALRPARDLVPATLPSDSSGRSGKSRYYRA+WRLAVGVVLRDLRSSAWQRSENARNNLQSAQAARSEIFDRPWS EE EYRAARGLLWRTWFAEWVGAARYLSLRQLLQ+RLVVENFSDKSGGIHNRLYEDLEVQSSTQKVTKSSGATGKRTGERKLARY+MPW LPQEDV KAWGLINRKT RWELR AGGFKLAIDEERA+QGQLDP+VLQALWSIQLQLDAQLPHR+CAFARRMAFLR GWRSRIDKLWQARAEKQRRLGLGVGDPPAPPRLTPNDSISFTASEAGFMGLSEAD++EAAE+TVVEEAGDGADRVGTLLVRMGQLDGVGGVGLLS+APKAIATLMLEESSATLEEMNLETNSTEV
Sbjct:    1 MTSFIERKVNEICGRWLDGFTKDNVDVSLLQAKITLSDLHFKTDELCLLSPTFAPSFFYVGKLSIDIPLAWNFSRPVKMAVSDVLGVIRVCDHGSMQAEDARRSISANVHVKAILSKLADELGGGGADEGKRPARMNLQTAYNLHKVMRKLEVTVKNAHVRVEEPRREVNDESSSHQGSSSPAVAFGVCLRGISLGMDEAADVEADGGLAGARWLGKKFRAMETALLGNISRYDAVDGALDAHSNEQRDAQAHGRSDTGSDGVDDTSGEKAASDESTTSSTLAVTKFASVRGASVYFCRDEECYSATDREETLRRLREDLRSPPAALPPLLRRCRGGVGLRVVLSAKEWGKIESMDIRLLGGDINLQVGDDQLGYLLRWASLLNGHMRTLALSALRPARDLVPATLPSDSSGRSGKSRYYRALWRLAVGVVLRDLRSSAWQRSENARNNLQSAQAARSEIFDRPWSNEEREYRAARGLLWRTWFAEWVGAARYLSLRQLLQTRLVVENFSDKSGGIHNRLYEDLEVQSSTQKVTKSSGATGKRTGERKLARYLMPWELPQEDVDKAWGLINRKTWRWELRGAGGFKLAIDEERAEQGQLDPAVLQALWSIQLQLDAQLPHRICAFARRMAFLRFGWRSRIDKLWQARAEKQRRLGLGVGDPPAPPRLTPNDSISFTASEAGFMGLSEADTNEAAETTVVEEAGDGADRVGTLLVRMGQLDGVGGVGLLSVAPKAIATLMLEESSATLEEMNLETNSTEV 759
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8776.20246.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5C7_ECTSI0.000e+095.13Chorein N-terminal domain-containing protein n=2 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026854Vacuolar protein sorting-associated protein 13, N-terminal domainPFAMPF12624Chorein_Ncoord: 4..99
e-value: 8.4E-11
score: 42.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8776contigEcto-sp13_S_contig8776:538..6572 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8776.20246.1mRNA_Ecto-sp13_S_contig8776.20246.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8776 538..6572 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8776.20246.1 ID=prot_Ecto-sp13_S_contig8776.20246.1|Name=mRNA_Ecto-sp13_S_contig8776.20246.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=758bp
MTSFIERKVNEICGRWLDGFTKDNVDVSLLQAKITLSDLHFKTDELCLLS
PTFAPSFFYVGKLSIDIPLAWNFSRPVKMAVSDVLGVIRVCDHGSMQAED
ARRSISANVHVKAILSKLVDELGGGGADEGKRQARMNLQTAYNLHKVMQK
LEVTVKNAHVRVEEPRREVNDKSSSRRGSSLPAVAFGVCLRGISLGIDEA
AVEADGGLAGESWLGKKFRAMESALLGNISRYDAVDGALNAHSNEQRDAQ
AHGRGDAGSDGVDDTSGEQAASDESTTSSTLAVTKFASVRGASVYFCRDE
ECYSATDREETLRRLREDLRSPPAALPPLLKRCRGGVGLRVVLSAKEWGK
IESMDVRLLAGDINVQVGDDQLGYLLRWASLLNGHMRTLALSALRPARDL
VPATLPSDSSGRSGKSRYYRAMWRLAVGVVLRDLRSSAWQRSENARNNLQ
SAQAARSEIFDRPWSTEESEYRAARGLLWRTWFAEWVGAARYLSLRQLLQ
SRLVVENFSDKSGGIHNRLYEDLEVQSSTQKVTKSSGATGKRTGERKLAR
YIMPWGLPQEDVHKAWGLINRKTRRWELREAGGFKLAIDEERADQGQLDP
SVLQALWSIQLQLDAQLPHRVCAFARRMAFLRVGWRSRIDKLWQARAEKQ
RRLGLGVGDPPAPPRLTPNDSISFTASEAGFMGLSEADSSEAAESTVVEE
AGDGADRVGTLLVRMGQLDGVGGVGLLSLAPKAIATLMLEESSATLEEMN
LETNSTEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026854VPS13_N