prot_Ecto-sp13_S_contig12439.2024.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12439.2024.1
Unique Nameprot_Ecto-sp13_S_contig12439.2024.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length114
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12439.2024.1 vs. uniprot
Match: A0A6H5KYH1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH1_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 9.770e-42
Identity = 87/114 (76.32%), Postives = 89/114 (78.07%), Query Frame = 0 
Query:    1 DSACSERSQVEVWAVMVQALAGLAAVHAISERSVHRAVCLDNILVAARSSPESPPGRRLPLAGXXXXXXXXXXXXXXXXXXXXSHPRGQHGFRRAKLGPPFPAALARPSAGCIA 114
            DSA SER QVEVWAVM+QALAGLAAVHA+SERSVHRAVCLDNILVAARSSPESPPGR LPLAG                    S P GQHGFRRAKLGPPFPAALARPSAGCIA
Sbjct: 1207 DSASSERFQVEVWAVMIQALAGLAAVHAVSERSVHRAVCLDNILVAARSSPESPPGRLLPLAGGGGEGAVAPNSDGSSSS---SDPSGQHGFRRAKLGPPFPAALARPSAGCIA 1317
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12439.2024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KYH1_9PHAE9.770e-4276.32Protein kinase domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12439contigEcto-sp13_S_contig12439:1614..1955 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12439.2024.1mRNA_Ecto-sp13_S_contig12439.2024.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12439 1614..1956 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12439.2024.1 ID=prot_Ecto-sp13_S_contig12439.2024.1|Name=mRNA_Ecto-sp13_S_contig12439.2024.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=114bp
DSACSERSQVEVWAVMVQALAGLAAVHAISERSVHRAVCLDNILVAARSS
PESPPGRRLPLAGGGGGGSVSPNSDGSSSSSSSSHPRGQHGFRRAKLGPP
FPAALARPSAGCIA
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