prot_Ecto-sp13_S_contig877.20240.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig877.20240.1
Unique Nameprot_Ecto-sp13_S_contig877.20240.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1138
Homology
BLAST of mRNA_Ecto-sp13_S_contig877.20240.1 vs. uniprot
Match: A0A6H5L777_9PHAE (BRCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L777_9PHAE)

HSP 1 Score: 1250 bits (3235), Expect = 0.000e+0
Identity = 933/1247 (74.82%), Postives = 959/1247 (76.90%), Query Frame = 0
Query:    1 AGLSAPVGEGRG-WTRSGTPELREGSSSSPTPVEEVLDPLLVPGQGWRRRRRSATVGGWDATRLQPTAKRRASIRTSAAPTSPVGLGPVAGLPGTDEGGWSGDDN---PATAAAAESAXXAGVAGASVKAVMPALAKAYLSPVHVKSPISRCYGAASSSSSDQRNRRHLQRASTVPSPSRTVTLASAISAEAVSAGATAGAISPTSRARAAGSRRXXXXXXXXXXXXXXAVVPEAGDCTRDRCQRPTADQLNDPVFRGRMKARTRAAKXXXXXXXXXXX-TGSGNCGGSALTGARCQPDRRIHQAGWVDDVGRGQQGKRGGGGVEQRQAAGFNGWMSSRRQDWGLDDVGLPAAQFRCVGSAAPSASSRRLSRSKTAPSPSKSXXXXXXXXXXXXXXXXXXAARAKPTAERLTGPSLGGKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRPRSVGVGPRSHAKKKSRGNEEGVREDAGAVAAXXXXXXXXXXSADTTRADKTLTSSPSPRQRQKTSGSIWCRVVSHEGGRGAPAQKCCRQQRXXXXXXXVAVSPVMSAARQHHRSRGPRGEKMLRQASVQAAGTATAAPTPTAEKNPDSPXXXXXXXXXXGRSGSFVGLSLVLVGLPDDVHLGVERTIVAGSGRVLEDIPPPKTRGGLVFRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVPSASRLPRYVLAIATGTPLLHHLWVSDSAAEARPLPASSYLLPGAREASKRXXXXXXXXXXXXXXXXXXXXAGGSHKASRAALAKAVSKTGTPLMGMAIGVAHPSPTSCERWAQVLRAAGAQTVLRITGDPLLLLLPPREETAAWTTSSPSRGTRSCSRGRGTVGASSLSSSSLQPGQLAGLDCVLCDFPGAWNGSGGGDDSECRAAAGRRPVTGNVGVPAIAGTTTKKAKSSPPSFSSLGLVLEAAKLEGVPVVALSWAIDCVVRGTRVRQQARPEYLTPFLDASAAAAWPSSRSPLLAGGTSTRLLVAVSQSGTRYEVSDHVYFSAAGRGRGXXXXXXXXXXXXXXXXXXXXXXXAAVGHIVHLERAGGSGGRVFATIEPLQIPYNKRAVVS---------------------------------------------------------------------------------------------------------GYCGRDPDVFVQQQRVPTVRGPPNLRTGK 1137
            AG SAPVGE RG   RSGTPELRE SSS+PTPVE V  P L  GQG R    SATVGG DAT LQP AKRRA  +TSAA T PVGLGPVAG  G D GG SGDD+   PATAA A     AGVAGA+VKAV PALA+ YLSP  VKSPIS CYGAA+SSSS +R+  HLQRASTVPSP+RTVTL+SAISAE VS  A+AGAISPTSRARAAGSRR              AV PEA DCTRDRCQ+ TADQLNDPVFRGRMK RTRAA  XXXXXX     T SGN GGSALTGARCQPDRRIHQAGWVDDVGRGQQGKRG GGVEQRQAAGFNGWMSSRRQDWGLDDVGLPAAQ R   S     S                XXXXXXXXXXXXXXXX  AARAKPTAE  TGPSLGGKS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RPRSVGVGPRSHAKKKSRGN+EGVREDAGAVAAXXXXXXXXX SAD TRADKTLTSSPSP  RQKTSGS+ CR VSHEGGRG PA+KCCRQQR  XXXX +AVSPV SAARQHHRSRGPRGEKMLRQASVQAAGTA AAPTPTAE   DSP   XXXX   GRSG   GLSLVLVGLPDDVH  VERTIVAG GRVL+               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVPSA RLPRYVLAIATGTPLLHHLWVSDSAAEARPLPAS YLLPGAREAS+RXXXXXXXXXXXXXXXX    AGGSHK SRAALAKAVSKTGTPL+GMAIGVAHPSPT+CERWAQVLRAAGAQTVLRITGDPLLLL PP+E+TA WTTSSPSRGTRSCSRGR T GASS SSSSLQ GQLAGLDCVLCDFPGAWNGSGGGDD+ECRAA GRRPV GN GVPAIAGT TKKAKSSPP FSSLGLV EAAKLEGVPVVALSWA+DCVVRGTRVRQQARPEYLTPFLDAS AA  PSSRS  LAGGT TRLLVAVS+SGTRYEV DHVYFSAAG GRGXXXXXXXXXXXXXXXXXXXXXX A VG IVHLERAGGSGGRVFATIEPLQIP NKRAVVS                                                                                                         GYCGRDPDV+VQQQRVPT RGPP LRTGK
Sbjct: 1974 AGSSAPVGERRGRLIRSGTPELREASSSTPTPVE-VPGPSLALGQG-RXXXXSATVGGGDATCLQPPAKRRAGAKTSAAATPPVGLGPVAGFTGPDYGGGSGDDSAHRPATAAPAP----AGVAGATVKAVKPALAEVYLSPARVKSPISGCYGAATSSSSGRRHLHHLQRASTVPSPTRTVTLSSAISAETVSVCASAGAISPTSRARAAGSRRSSSMAVGASGDGGGAVFPEARDCTRDRCQKATADQLNDPVFRGRMKVRTRAANAXXXXXXSTCGNTVSGNGGGSALTGARCQPDRRIHQAGWVDDVGRGQQGKRGRGGVEQRQAAGFNGWMSSRRQDWGLDDVGLPAAQSRGAAS-----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAARAKPTAECFTGPSLGGKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRPRSVGVGPRSHAKKKSRGNKEGVREDAGAVAAXXXXXXXXXGSADRTRADKTLTSSPSPGPRQKTSGSVRCREVSHEGGRGIPAKKCCRQQRATXXXXAMAVSPVTSAARQHHRSRGPRGEKMLRQASVQAAGTAAAAPTPTAENVRDSPAAAXXXXA--GRSGPLFGLSLVLVGLPDDVHRDVERTIVAGGGRVLDXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVPSAFRLPRYVLAIATGTPLLHHLWVSDSAAEARPLPASPYLLPGAREASRRXXXXXXXXXXXXXXXXATAKAGGSHKVSRAALAKAVSKTGTPLLGMAIGVAHPSPTTCERWAQVLRAAGAQTVLRITGDPLLLL-PPQEKTADWTTSSPSRGTRSCSRGRRTAGASSSSSSSLQAGQLAGLDCVLCDFPGAWNGSGGGDDTECRAATGRRPVRGNGGVPAIAGTATKKAKSSPPPFSSLGLVFEAAKLEGVPVVALSWAMDCVVRGTRVRQQARPEYLTPFLDASVAAGRPSSRSQSLAGGTDTRLLVAVSRSGTRYEVGDHVYFSAAGSGRGXXXXXXXXXXXXXXXXXXXXXXQAEVGRIVHLERAGGSGGRVFATIEPLQIPDNKRAVVSSLGDSGGRAAGGGSGALGRSFLQVVVRGGGGYFASPSADSSVSRGRARRARELKKVVLAEKKGSTAAGAGTRTPGSQNWQKVEVSDAFLLGRVSVLSAREFNSRRGYCGRDPDVYVQQQRVPTARGPPTLRTGK 3204          
BLAST of mRNA_Ecto-sp13_S_contig877.20240.1 vs. uniprot
Match: D7FGY7_ECTSI (BRCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGY7_ECTSI)

HSP 1 Score: 808 bits (2088), Expect = 3.590e-279
Identity = 585/717 (81.59%), Postives = 598/717 (83.40%), Query Frame = 0
Query:  226 AVVPEAGDCTRDRCQRPTADQLNDPVFRGRMKARTRAAKXXXXXXXXXXX--TGSGNCGGSALTGARCQPDRRIHQAGWVDDVGRGQQGKRGGGG-VEQRQAAGFNGWMSSRRQDWGLDDVGLPAAQFRCVGSAAPSASSRRLSRSKTAPSPSKSXXXXXXXXXXXXXXXXXXAARAKPTAERLTGPSLGGKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRPRSVGVGPRSHAKKKSRGNEEGVREDAGAVAAXXXXXXXXXXSADTTRADKTLTSSPSPRQRQKTSGSIWCRVVSHEGGRGAPAQKCCRQQRXXXXXXXVAVSPVMSAARQHHRSRGPRGEKMLRQASVQAAGTATAAPTPTAEKNPDSPXXXXXXXXXXGRSGSFVGLSLVLVGLPDDVHLGVERTIVAGSGRVLEDIPPPKTRGGLVFRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVPSASRLPRYVLAIATGTPLLHHLWVSDSAAEARPLPASSYLLPGAREASKRXXXXXXXXXXXXXXXXXXXXAGGSHKASRAALAKAVSKTGTPLMGMAIGVAHPSPTSCERWAQVLRAAGAQTVLRITGDPLLLLLPPREETAAWT-TSSPSRGTRSCSRGRGTVGASSLSSSSLQPGQLAGLDCVLCDFPGAWNGSGGGDDSECRAAAGRRPVTGNVGVPAIAG 938
            AVVPEA DCTRDRCQ PTADQLNDPVFRGRMKARTRAAK XXXXXXX       SGN GGSALTGARCQPD+RIHQ GWVDDVGRG QGKRGGGG VEQRQA GFNGWMSSRRQDWGLDDVGLPAAQ R VGSAAPSAS  RLSRSKT       XXXXXXXXXXXXXXXXXX ARAKPTAERLTGPSLGGKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          RPRS+GVGPRSHAKKKSRGN+EGV EDAGAVAA          SAD+TRADKTLTSSPSPRQR+KTSGS+ CR VSHEGGRG PA+KCCRQQR       VAVSPV SAARQHHRS GPRGEKMLRQASVQAAGTA AAPTPT E   DSP          GR G F GLSLVLVGLPDDVH  V+RTIVA  GRVLED+PPPKTRGGL  R         XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    VSVPSASRLPRYVLAIATGTPLLHHLWVSDSAAEARPLPAS YLLPGAREAS+ XXXXXXXXXXXXXXXXXXXX    HKAS  ALAKAVSKTGTPLMGMAIGVAHPSPT+CERWAQVLRAAGAQTVLR+TGDPLL+LL PREETA  T TSSPSRGT SCSRGR T GASS SSSSLQ  QLAGLDCVLCDFPGAWNGSGGGDD ECRAA GRRPV GN GVPAIAG
Sbjct:   12 AVVPEARDCTRDRCQEPTADQLNDPVFRGRMKARTRAAKAXXXXXXXSIGGNPASGNGGGSALTGARCQPDKRIHQVGWVDDVGRGLQGKRGGGGGVEQRQAVGFNGWMSSRRQDWGLDDVGLPAAQSRGVGSAAPSAS--RLSRSKTXXX--XXXXXXXXXXXXXXXXXXXXXARAKPTAERLTGPSLGGKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGCGCNGG-TRPRSIGVGPRSHAKKKSRGNKEGVGEDAGAVAAIPAVPAAAVGSADSTRADKTLTSSPSPRQRKKTSGSVRCREVSHEGGRGIPAKKCCRQQRARSSAAAVAVSPVTSAARQHHRSHGPRGEKMLRQASVQAAGTAAAAPTPTTENVRDSPAAAAAATAA-GRIGPFFGLSLVLVGLPDDVHREVDRTIVACGGRVLEDLPPPKTRGGLALR--RPAAGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVVVVSVPSASRLPRYVLAIATGTPLLHHLWVSDSAAEARPLPASPYLLPGAREASRXXXXXXXXXXXXXXXXXXXXXXXXGHKASHVALAKAVSKTGTPLMGMAIGVAHPSPTTCERWAQVLRAAGAQTVLRVTGDPLLVLLAPREETAVGTRTSSPSRGTWSCSRGRRTAGASSSSSSSLQAEQLAGLDCVLCDFPGAWNGSGGGDDGECRAATGRRPVRGNGGVPAIAG 720          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig877.20240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L777_9PHAE0.000e+074.82BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FGY7_ECTSI3.590e-27981.59BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 637..786
e-value: 4.0E-8
score: 35.5
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 714..758
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 706..756
score: 8.249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig877contigEcto-sp13_S_contig877:9474..13202 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig877.20240.1mRNA_Ecto-sp13_S_contig877.20240.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig877 9474..13202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig877.20240.1 ID=prot_Ecto-sp13_S_contig877.20240.1|Name=mRNA_Ecto-sp13_S_contig877.20240.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1138bp
AGLSAPVGEGRGWTRSGTPELREGSSSSPTPVEEVLDPLLVPGQGWRRRR
RSATVGGWDATRLQPTAKRRASIRTSAAPTSPVGLGPVAGLPGTDEGGWS
GDDNPATAAAAESAAAAGVAGASVKAVMPALAKAYLSPVHVKSPISRCYG
AASSSSSDQRNRRHLQRASTVPSPSRTVTLASAISAEAVSAGATAGAISP
TSRARAAGSRRSSSMAVGGGGDDGGAVVPEAGDCTRDRCQRPTADQLNDP
VFRGRMKARTRAAKAAAAAASTSGNTGSGNCGGSALTGARCQPDRRIHQA
GWVDDVGRGQQGKRGGGGVEQRQAAGFNGWMSSRRQDWGLDDVGLPAAQF
RCVGSAAPSASSRRLSRSKTAPSPSKSGGGAASPPPSPPPPPSTSAARAK
PTAERLTGPSLGGKSGGARASAAVGSAPGRGRGTKRGADGGSSGGGGGCD
GGVDGGIRPRSVGVGPRSHAKKKSRGNEEGVREDAGAVAAVPAVPAAPAA
SADTTRADKTLTSSPSPRQRQKTSGSIWCRVVSHEGGRGAPAQKCCRQQR
ATTSAAAVAVSPVMSAARQHHRSRGPRGEKMLRQASVQAAGTATAAPTPT
AEKNPDSPPAAAAAAAAAGRSGSFVGLSLVLVGLPDDVHLGVERTIVAGS
GRVLEDIPPPKTRGGLVFRPPAASAEATAAAADASRRGRKRDKVTAAAAA
AAEEKEDVVVVVSVPSASRLPRYVLAIATGTPLLHHLWVSDSAAEARPLP
ASSYLLPGAREASKRRQAASSAGAAAVRTTTAAAKAGGSHKASRAALAKA
VSKTGTPLMGMAIGVAHPSPTSCERWAQVLRAAGAQTVLRITGDPLLLLL
PPREETAAWTTSSPSRGTRSCSRGRGTVGASSLSSSSLQPGQLAGLDCVL
CDFPGAWNGSGGGDDSECRAAAGRRPVTGNVGVPAIAGTTTKKAKSSPPS
FSSLGLVLEAAKLEGVPVVALSWAIDCVVRGTRVRQQARPEYLTPFLDAS
AAAAWPSSRSPLLAGGTSTRLLVAVSQSGTRYEVSDHVYFSAAGRGRGGG
GCTGGGGSGGPHGGDERRQQQAAVGHIVHLERAGGSGGRVFATIEPLQIP
YNKRAVVSGYCGRDPDVFVQQQRVPTVRGPPNLRTGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036420BRCT_dom_sf
IPR001357BRCT_dom