prot_Ecto-sp13_S_contig8766.20236.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8766.20236.1
Unique Nameprot_Ecto-sp13_S_contig8766.20236.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length449
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8766.20236.1 vs. uniprot
Match: A0A6H5KWN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWN5_9PHAE)

HSP 1 Score: 590 bits (1522), Expect = 7.340e-197
Identity = 345/434 (79.49%), Postives = 361/434 (83.18%), Query Frame = 0 
Query:    1 MSVSELQRDQDQSIKDAQDAAAALSNVHEKAAGVEQDNQRLVAEV-----AKYRLQVQGATGGAG----DDNTMPTRRLVGALQGQDTGTQTSLPLEQDGNTSTKQLDTEGLRADLEAARDEAACFASDAHKSKELETLVRNELHAVQLALRESQLKIAELNGNLATADHEKKLSAVAVEELRLENACLKRNIEVVRSASEGDASRQVADTLVDELKQARVHLATTTSERDGLNDEVGAIKQQLVRCEGVRKAEREMFDSSLANQQRQSESLQAMVKRLEVEMLAGQQREEALHVAAKLLRENVAASKLEVWRLQENLRETTEEAERVASDLLSTEPETAPTSCQKGESEAELASAADLARATAEAQXXXXXXXXXXXXXXXXQASVQDTMIKLVDSQGIANSLQVRFKRAIPKQRNMVAILRPAIHLFASETE 425
            MS+SELQRDQDQS+K  QDAAAAL+NVHEKAAGVE+DNQRLVAEV     AKYR+QVQGAT GA     DDNTMPTRRLV ALQGQDTGTQTSLPLE DGNT TKQLDTEGLRADLEAA+ EAACFA+D HKSKELETLVR+EL A QLALRESQLKIAELNG LATADHEKKLSAV  EELRLENA LKRNIEVV SASEGDASRQVADTLVDELK+ R  LAT TSERD LNDEVGAIKQQLVRCEGVRKAEREMFDSSLANQQRQSESLQA VKRLEV+MLAGQQREEALH AAKLLRENVAASKLEVWRLQENLRETTEEAERVASD   TEPETA TSCQKGESEAELASAADLARATAEAQ                QAS+QDTM KLVDSQGIA SLQ    +A   +++    L  A+   A   E
Sbjct:  263 MSLSELQRDQDQSVKATQDAAAALANVHEKAAGVERDNQRLVAEVKHMLVAKYRVQVQGATSGAAQNLEDDNTMPTRRLVEALQGQDTGTQTSLPLEHDGNTPTKQLDTEGLRADLEAAKHEAACFANDVHKSKELETLVRSELQAAQLALRESQLKIAELNGKLATADHEKKLSAVTAEELRLENARLKRNIEVVHSASEGDASRQVADTLVDELKEVRAQLATVTSERDRLNDEVGAIKQQLVRCEGVRKAEREMFDSSLANQQRQSESLQATVKRLEVDMLAGQQREEALHTAAKLLRENVAASKLEVWRLQENLRETTEEAERVASDFRCTEPETAQTSCQKGESEAELASAADLARATAEAQEMASRLQLAEDQVDRLQASIQDTMTKLVDSQGIAASLQEELDKARGSEKDTARHLDEALSRCAKAEE 696
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BLAST of mRNA_Ecto-sp13_S_contig8766.20236.1 vs. uniprot
Match: D7G8Q0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q0_ECTSI)

HSP 1 Score: 580 bits (1496), Expect = 1.960e-193
Identity = 339/429 (79.02%), Postives = 356/429 (82.98%), Query Frame = 0 
Query:    1 MSVSELQRDQDQSIKDAQDAAAALSNVHEKAAGVEQDNQRLVAEVAKYRLQVQGATGGA----GDDNTMPTRRLVGALQGQDTGTQTSLPLEQDGNTSTKQLDTEGLRADLEAARDEAACFASDAHKSKELETLVRNELHAVQLALRESQLKIAELNGNLATADHEKKLSAVAVEELRLENACLKRNIEVVRSASEGDASRQVADTLVDELKQARVHLATTTSERDGLNDEVGAIKQQLVRCEGVRKAEREMFDSSLANQQRQSESLQAMVKRLEVEMLAGQQREEALHVAAKLLRENVAASKLEVWRLQENLRETTEEAERVASDLLSTEPETAPTSCQKGESEAELASAADLARATAEAQXXXXXXXXXXXXXXXXQASVQDTMIKLVDSQGIANSLQVRFKRAIPKQRNMVAILRPAIHLFASETE 425
            MS+SELQRDQDQSIKDA+DAAAAL+NVHEKAA VE+DNQRLVAEVAK R+QVQGAT G     GD+NTM TR+ V A QGQDTGTQTSLPLE DGNT TKQLDTEGLRADLEAAR EAACFASD HKSKELETLVRNELHA QLA RESQLK+AELNGNLATADHEKKLSAV  EEL LENA LKRN+EVVRSASEG ASRQVADTLVDELK+ RV LAT TSERDGLNDEVG IKQQLVRCE VRKAEREMFDSSLAN QRQSES QA VKRLEV+MLAGQQREEALH AAKLLRENVAASKLEVWRLQENLRETT EAERVASDLL TEPETA TSCQKGESEAELASAADLA ATAEA+                QASVQ+TM KLVDSQGIA SLQ     A   +++    L  A+  FA   E
Sbjct:  226 MSLSELQRDQDQSIKDAKDAAAALANVHEKAAAVERDNQRLVAEVAKCRVQVQGATSGEAQNLGDENTMRTRKHVEARQGQDTGTQTSLPLEHDGNTPTKQLDTEGLRADLEAARHEAACFASDVHKSKELETLVRNELHAAQLAFRESQLKVAELNGNLATADHEKKLSAVTAEELGLENARLKRNMEVVRSASEGGASRQVADTLVDELKEVRVQLATMTSERDGLNDEVGEIKQQLVRCEDVRKAEREMFDSSLANHQRQSESQQATVKRLEVDMLAGQQREEALHTAAKLLRENVAASKLEVWRLQENLRETTGEAERVASDLLCTEPETAQTSCQKGESEAELASAADLATATAEAREMASRLQLAEDQVDRLQASVQETMTKLVDSQGIAASLQEELDEARGSEKDTAQHLDEALSRFAKAEE 654
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8766.20236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWN5_9PHAE7.340e-19779.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8Q0_ECTSI1.960e-19379.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 295..322
NoneNo IPR availableCOILSCoilCoilcoord: 170..190
NoneNo IPR availableCOILSCoilCoilcoord: 350..384
NoneNo IPR availableCOILSCoilCoilcoord: 31..51
NoneNo IPR availableCOILSCoilCoilcoord: 253..273
NoneNo IPR availableCOILSCoilCoilcoord: 142..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8766contigEcto-sp13_S_contig8766:169..5332 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8766.20236.1mRNA_Ecto-sp13_S_contig8766.20236.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8766 1..6643 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8766.20236.1 ID=prot_Ecto-sp13_S_contig8766.20236.1|Name=mRNA_Ecto-sp13_S_contig8766.20236.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=449bp
MSVSELQRDQDQSIKDAQDAAAALSNVHEKAAGVEQDNQRLVAEVAKYRL
QVQGATGGAGDDNTMPTRRLVGALQGQDTGTQTSLPLEQDGNTSTKQLDT
EGLRADLEAARDEAACFASDAHKSKELETLVRNELHAVQLALRESQLKIA
ELNGNLATADHEKKLSAVAVEELRLENACLKRNIEVVRSASEGDASRQVA
DTLVDELKQARVHLATTTSERDGLNDEVGAIKQQLVRCEGVRKAEREMFD
SSLANQQRQSESLQAMVKRLEVEMLAGQQREEALHVAAKLLRENVAASKL
EVWRLQENLRETTEEAERVASDLLSTEPETAPTSCQKGESEAELASAADL
ARATAEAQDMASRLQLAEDQVDRLQASVQDTMIKLVDSQGIANSLQVRFK
RAIPKQRNMVAILRPAIHLFASETEPWLVARCESLPNSCCAFLSPRCE*
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