mRNA_Ecto-sp13_S_contig8759.20232.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8759.20232.1
Unique NamemRNA_Ecto-sp13_S_contig8759.20232.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8759.20232.1 vs. uniprot
Match: D7FMC3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMC3_ECTSI)

HSP 1 Score: 773 bits (1997), Expect = 5.580e-268
Identity = 449/540 (83.15%), Postives = 463/540 (85.74%), Query Frame = 2 
Query:   83 MYLSTRDRVKPCRVVALTRKPTPGPASPPR-ISISMERRRGLSLRTTPDPHAANRTARVGGDKIKHRRVGMDRNLGRPGSRTPGDKDGSGGNSNDKETVQSGDETDIPSPLSSRASSSAEMDQDXXXXXXXXXXXXDESXXXXXXXXXXXXXGSIGERSSSGESASEGGMTSATVRPTMPQKNVAASRKKRSVLTAIACRQLAAATSKQTRPSAWAMKPTESRRQAAERRPPAAKVYPRAKAAAGAPSKTTAIVKSKSSRPKGTTTSKTVVKGGDGGSGRSPSRKRETPRVSASRHMAWERQLRASTTAGASNPDRTRDAAGHRGRQKANKKGGGEEDGRPSLGTWEKTIVRLEILKKITGKGDEELQWLCSAKQGDGIQKSETRRDCAETDYHRLLFQESMLQAGMEILKDRRLEVSLKTLAKMGGDLGRLTKLHEQLAEEEASLTTVNAEDKVDGHEVTTAEEESASAS-AAVMASLQRDRLGQARVDAEAELRRVLEGISSAQEKVLRVGHGLKEEVAGGTRKVFGECKSALETAIG 1696
            MYLSTRDRVKPCRV+ALTR+P  GPASPP  ISISM+RR GLS RTTPDPHAANRTARVG DKIKHRRVGMDRNLGR G+RTPGDKDGSGGNSNDK+ VQSGDETDIPSPLSSRASSSAEMDQ                                             GM S+TVR TMPQKN+ ASRKKRSVLTAIACRQLAAATSKQTR SAWAMKPTESRRQAAERR P AKVYPRAKAAA APSKTTAIVKSKSSRPKGTTTSK VV+GGDGGSGRSPSRKRETPRVSASRHMAWERQLRASTTAGASNPDRT+DAAGHR RQKA+K GGG+  GRPSLGTWEKTIVRLEILKKITGKGDEEL+WLCSAKQGDGIQKSETRRDCAETDYHRLLFQESMLQAGMEILKDRRLEVSLKTLAKMGGDL RLTKLHEQLAEEEASLTTV+AEDKVDGHE TT E ESA    AAV+ASLQRDRLGQARVDAEAELRRVLEGIS AQ KVL VGHGLKEEVAGGTRKVFGECKSALETAIG
Sbjct:    1 MYLSTRDRVKPCRVIALTRRPIRGPASPPPGISISMQRRLGLSPRTTPDPHAANRTARVGEDKIKHRRVGMDRNLGRAGTRTPGDKDGSGGNSNDKKIVQSGDETDIPSPLSSRASSSAEMDQ---------------------------------------------GMASSTVRSTMPQKNLTASRKKRSVLTAIACRQLAAATSKQTRQSAWAMKPTESRRQAAERRTPVAKVYPRAKAAAEAPSKTTAIVKSKSSRPKGTTTSKRVVEGGDGGSGRSPSRKRETPRVSASRHMAWERQLRASTTAGASNPDRTKDAAGHRARQKADKNGGGDGGGRPSLGTWEKTIVRLEILKKITGKGDEELEWLCSAKQGDGIQKSETRRDCAETDYHRLLFQESMLQAGMEILKDRRLEVSLKTLAKMGGDLERLTKLHEQLAEEEASLTTVSAEDKVDGHEATTEEAESAXXXXAAVVASLQRDRLGQARVDAEAELRRVLEGISDAQRKVLLVGHGLKEEVAGGTRKVFGECKSALETAIG 495
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BLAST of mRNA_Ecto-sp13_S_contig8759.20232.1 vs. uniprot
Match: A0A6H5L4G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G1_9PHAE)

HSP 1 Score: 699 bits (1805), Expect = 2.430e-247
Identity = 413/505 (81.78%), Postives = 427/505 (84.55%), Query Frame = 2 
Query:  185 MERRRGLSLRTTPDPHAAN-RTARVGGDKIKHRRVGMDRNLGRPGSRTPGDKDGSGGNSNDKETVQSGDETDIPSPLSSRASSSAEMDQDXXXXXXXXXXXXDESXXXXXXXXXXXXXGSIGERSSSGESASEGGMTSATVRPTMPQKNVAASRKKRSVLTAIACRQLAAATSKQTRPSAWAMKPTESRRQAAERRPPAAKVYPRAKAAAGAPSKTTAIVKSKSSRPKGTTTSKTVVKGGDGGSGRSPSRKRETPRVSASRHMAWERQLRASTTAGASNPDRTRDAAGHRGRQKANKKGGGEEDGRPSLGTWEKTIVRLEILKKITGKGDEELQWLCSAKQGDGIQKSETRRDCAETDYHRLLFQESMLQAGMEILKDRRLEVSLKTLAKMGGDLGRLTKLHEQLAEEEASLTTVNAEDKVDGHEVTTAEEESASASAAVMASLQRDRLGQARVDAEAELRRVLEGISSAQEKVLRVGHGLKEEVAGGTRKVFGECKSALETAIG 1696
            M+RR GLS RTTP PHAAN R ARV  DKIKHRRVGMDRNLGR GSRTPGDKDGSGGNSNDK  VQSGDETDIPSPLSSRASSSAEMDQD                             +I   S++  S    GMTS TVR TMP+KN+ ASRKKR V TA ACRQLAAATSKQ R SAWAMKPTES RQAAERR PAAKVYPRAKAAA APSKTT+IVKS SSRPKGT  SK VV+GGDGGSGRSP RKRETP VSASRHMAWERQLRASTTAGASNPDRT+DAAG RGRQKA+K GGGE DGRPSLGTWEKTIVRLEILKKITGKGDEEL+WLCSAK+GDGIQKSETRRDCAETDYHR+LFQESMLQAGMEILKDRRLEVSLKTLAKMGGDL RLTKLHEQLAEEEASLTTVNAEDKVDG E T  E ESA+A AAVMASLQRDRLG ARVDAEAELRRVLEGIS AQEKVL VGHGLKEEVAGGTRKVFGECKSALETAIG
Sbjct:    1 MQRRLGLSPRTTPGPHAANNRNARVAKDKIKHRRVGMDRNLGRAGSRTPGDKDGSGGNSNDKNIVQSGDETDIPSPLSSRASSSAEMDQD-----------------------------TIATTSANSSSI---GMTSWTVRSTMPRKNLTASRKKRPVATAPACRQLAAATSKQIRQSAWAMKPTESHRQAAERRTPAAKVYPRAKAAAEAPSKTTSIVKSTSSRPKGTPKSKRVVEGGDGGSGRSPGRKRETPGVSASRHMAWERQLRASTTAGASNPDRTKDAAGRRGRQKADKNGGGERDGRPSLGTWEKTIVRLEILKKITGKGDEELEWLCSAKKGDGIQKSETRRDCAETDYHRVLFQESMLQAGMEILKDRRLEVSLKTLAKMGGDLERLTKLHEQLAEEEASLTTVNAEDKVDGDEATMHEAESAAAPAAVMASLQRDRLGLARVDAEAELRRVLEGISGAQEKVLLVGHGLKEEVAGGTRKVFGECKSALETAIG 473
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BLAST of mRNA_Ecto-sp13_S_contig8759.20232.1 vs. uniprot
Match: D7FTS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTS2_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 7.810e-67
Identity = 173/345 (50.14%), Postives = 209/345 (60.58%), Query Frame = 2 
Query:  701 KQTRPSAWAMKPTESRR---QAAERRPPAAKVYPRAKAAAGAPSKTTAIVKSKSSRPKGTTTSKTVVKGGDGGSG----RSPSRKRETPRVSASRHMAWERQLRASTTAGASN--PDRTRDAAGHRGRQKANKKGGGE--EDGRPSLGTWEKTIVRLEILKKITGKGDEELQWLCSAKQGDGIQKSETRRDCAETDYHRLLFQESMLQAGMEILKDRRLEVSLKTLAKMGGDLGRLTKLHEQLAEEEASLTTV--NAEDKVDGHEVTTAEEESASASAAVMASLQRDRLGQARVDAEAELRRVLEGISSAQEKVLRVGHGLKEEVAGGTRKVFGECKSALETAIG 1696
            KQT  SAWAMKPTE  +   +AA RR P  KV PR K AA                            G DGG      RSP +KR  PRVSASRHMAWER+LRA TTAG  +  P  T                     EDGRPSLGTW+K  +RLEILKKITGK DEEL+WL +A++G G+++SE RR+ AET+YHRLLF+ESML+AG EI+KDRRLEVSLKT+ KMG +L RLTK+HEQL E+E SLTT+  + +DK D                    + + D LG+AR  AEAELR  LEGIS+ +E+V  +G  +KEE  G   K+FGE K+ALET IG
Sbjct:  117 KQTGQSAWAMKPTERGQPFLKAAGRRAPTTKVPPRVKPAAA---------------------------GTDGGIAKEIRRSPRKKRRPPRVSASRHMAWERELRAPTTAGGESRKPSSTNXXXXXXXXXXXXXXXXXXXXEDGRPSLGTWQKASMRLEILKKITGKDDEELEWLITAQEGQGVKRSERRRENAETEYHRLLFEESMLKAGREIIKDRRLEVSLKTVIKMGEELQRLTKIHEQLTEQEKSLTTLIGDDDDKTD-------------------TATEMDHLGKARGMAEAELRYALEGISAGKERVRALGDLMKEE-CGRRGKMFGESKTALETVIG 414
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BLAST of mRNA_Ecto-sp13_S_contig8759.20232.1 vs. uniprot
Match: D7FT01_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT01_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 6.460e-63
Identity = 189/421 (44.89%), Postives = 219/421 (52.02%), Query Frame = 2 
Query:  728 MKPTESRR---QAAERRPPAAKVYPRAKAA-AGAP-------SKTTAIVKSKSSRPKGTT--------------------------------------------------------------------TSKTVVKG-----------GDGG-----SGRSPSRKRETPRVSASRHMAWERQLRASTTAGA--SNPDRTRDAAGHRGRQKANKKGGGEE-DGRPSLGTWEKTIVRLEILKKITGKGDEELQWLCSAKQGDGIQKSETRRDCAETDYHRLLFQESMLQAGMEILKDRRLEVSLKTLAKMGGDLGRLTKLHEQLAEEEASLTTVNAEDKVDGHEVTTAEEESASASAAVMASLQRDRLGQARV-DAEAELRRVLEGISSAQEKVLRVGHGLKEEVAGGTRKVFGECKSALETAI 1693
            MKPTE RR   +A ERR P A++ PRAK A AGAP       SKTT +VKSKS RPKG                                                                      TSKTV  G           GDGG     SG+SPS+KR+ PR SAS   A E  +RA  T G+  S P RT D    + +QK    GGGEE DG PSLGTWEKT+++LEILKKITGK DEEL+WL +A QG+ +Q SE RR+ AET+YHRLLFQESM+QAGMEILKDRRL VSLK +AKMGGD  RLT  H QLA+E                                        LGQA   +AEA+LRRV+EGIS+AQEKVLRVGH L +E   GT+K  G  K AL+T I
Sbjct:    1 MKPTERRRTPPKATERRTPVARLPPRAKKAPAGAPAPAARKCSKTTTMVKSKSPRPKGLAKAVDSXXXXXXXXXXXXXXXXXXXXXXXXPAXVKSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGATSKTVAGGEKSGGDRVAGGGDGGVAGGVSGKSPSKKRQRPRFSASTSTAPEHDVRAPATPGSPCSKPSRTMDEVVPQVQQKVYSTGGGEEGDGLPSLGTWEKTVLQLEILKKITGKDDEELEWLITATQGNAVQMSERRRETAETEYHRLLFQESMVQAGMEILKDRRLSVSLKAVAKMGGDFERLTNPHGQLAQEVGGKI-----------------------------------LGQAGGGEAEAKLRRVVEGISAAQEKVLRVGHALIDEAESGTKKAIGAYKGALKTVI 386
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BLAST of mRNA_Ecto-sp13_S_contig8759.20232.1 vs. uniprot
Match: D7FIN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN4_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 7.880e-31
Identity = 116/299 (38.80%), Postives = 154/299 (51.51%), Query Frame = 2 
Query:  932 KRETPRVSASRHMAWERQLRASTTAGASNPDR------TRDAAGHRGRQKANK--------------------------------KGGGEEDGRPSLGTWEKTIVRLEILKKITGKGDEELQWLCSAKQGDGIQKSETRRDCAETDYHRLLFQESMLQAGMEILKDRRLEVSLKTLAKMGGDLGRLTKLHEQLAEE------EASLTTVNAEDKVDGHEVTTAEEESASASAAVMASLQRDRLGQARVDAEAELRRVLEGISSAQEKVLRVGHGLKEEVAGGTRKVFGECKSALETAIG 1696
            KR  PRVSAS HMAWER LR   T     P +      ++  A HR  ++  K                                KG   EDGRPS+GTW  T   L+ILK+I+GK +EEL+WL  AK+G G++KSETRR+ AET+YHRLL +ESM +AG+++LKDRRLEV+L+ + K+G +L RLT+L E+L  +       A                                  +R RL +AR DAE +L RVL  I + +EK+  +G  +KEE     R+V G   SALET  G
Sbjct:  650 KRGPPRVSASGHMAWERNLR---TVSKFQPKKKVTSLPSKKEALHRAMRRGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKG---EDGRPSIGTWATTQNYLKILKEISGKDEEELEWLVVAKKGQGVKKSETRRENAETEYHRLLCEESMQEAGLKLLKDRRLEVALRNVGKLGEELDRLTELLEELGGQMMERAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRXXERARLERARGDAEEKLGRVLGDIGAGKEKLRALGGTVKEEC----RRVPGGGGSALETVEG 938
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BLAST of mRNA_Ecto-sp13_S_contig8759.20232.1 vs. uniprot
Match: A0A6H5KD39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD39_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 4.980e-29
Identity = 74/137 (54.01%), Postives = 102/137 (74.45%), Query Frame = 2 
Query: 1088 EDGRPSLGTWEKTIVRLEILKKITGKGDEELQWLCSAKQGDGIQKSETRRDCAETDYHRLLFQESMLQAGMEILKDRRLEVSLKTLAKMGGDLGRLTKLHEQLAEEEASLTTVNAEDKVDGHEVTTAEEESASASAA 1498
            EDGRPS+GTW  T   L+ILK+I+GK +EEL+WL  AK+G G++KSETRR+ AET+YHRLL +ESM +AG+++L+DRRLEV+L+ + K G +L RLT+L E+L  +E SL    A    D  +  +A+ ESA+A AA
Sbjct:  724 EDGRPSIGTWATTQNYLKILKEISGKDEEELEWLVVAKKGQGVEKSETRRENAETEYHRLLCEESMQEAGLKLLRDRRLEVALRNVGKQGEELDRLTELLEELGGQEMSLVAKGA----DAEQQESAQLESAAAVAA 856
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BLAST of mRNA_Ecto-sp13_S_contig8759.20232.1 vs. uniprot
Match: D7FMB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMB5_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 3.480e-28
Identity = 60/70 (85.71%), Postives = 63/70 (90.00%), Query Frame = 2 
Query:   83 MYLSTRDRVKPCRVVALTRKPTPGPASPPRISISMERRRGLSLRTTPDPHAANRTARVGGDKIKHRRVGM 292
            MYLSTRDRVKPCRV+ALTR+P P PASPP ISISM+RR GLS RTTPDPHAANRTARVG DKIKHR VGM
Sbjct:    1 MYLSTRDRVKPCRVIALTRRPIPRPASPPGISISMQRRLGLSPRTTPDPHAANRTARVGEDKIKHRSVGM 70
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BLAST of mRNA_Ecto-sp13_S_contig8759.20232.1 vs. uniprot
Match: A0A6H5KIS4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS4_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.230e-5
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = -2 
Query:   79 MLMLILGGEAGPGVGFLVRATTRHGLTRSRVDRYMV 186
            MLMLI G EAGP +GF VRAT+RHGLTRSRVDR +V
Sbjct:    1 MLMLIPGVEAGPAIGFPVRATSRHGLTRSRVDRDVV 36
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8759.20232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FMC3_ECTSI5.580e-26883.15Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5L4G1_9PHAE2.430e-24781.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTS2_ECTSI7.810e-6750.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FT01_ECTSI6.460e-6344.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FIN4_ECTSI7.880e-3138.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KD39_9PHAE4.980e-2954.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMB5_ECTSI3.480e-2885.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KIS4_9PHAE1.230e-577.78Reverse transcriptase domain-containing protein (F... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8759contigEcto-sp13_S_contig8759:61..5847 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score793.5
Seed ortholog evalue6.2e-227
Seed eggNOG ortholog2880.D7FMC3
Model size1696
Hectar predicted targeting categoryother localisation
Exons7
EggNOG OGs2C7IG@1,2QWI0@2759
Cds size1614
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8759.20232.1prot_Ecto-sp13_S_contig8759.20232.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8759 61..5765 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464148.615634-CDS-Ecto-sp13_S_contig8759:60..3511681464148.615634-CDS-Ecto-sp13_S_contig8759:60..351Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8759 61..351 -
1681464148.6283097-CDS-Ecto-sp13_S_contig8759:1101..12151681464148.6283097-CDS-Ecto-sp13_S_contig8759:1101..1215Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8759 1102..1215 -
1681464148.6393175-CDS-Ecto-sp13_S_contig8759:1422..15481681464148.6393175-CDS-Ecto-sp13_S_contig8759:1422..1548Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8759 1423..1548 -
1681464148.6502967-CDS-Ecto-sp13_S_contig8759:2131..23481681464148.6502967-CDS-Ecto-sp13_S_contig8759:2131..2348Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8759 2132..2348 -
1681464148.6653123-CDS-Ecto-sp13_S_contig8759:2740..31041681464148.6653123-CDS-Ecto-sp13_S_contig8759:2740..3104Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8759 2741..3104 -
1681464148.684451-CDS-Ecto-sp13_S_contig8759:3473..37651681464148.684451-CDS-Ecto-sp13_S_contig8759:3473..3765Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8759 3474..3765 -
1681464148.6939278-CDS-Ecto-sp13_S_contig8759:5555..57651681464148.6939278-CDS-Ecto-sp13_S_contig8759:5555..5765Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8759 5556..5765 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464148.7056553-UTR-Ecto-sp13_S_contig8759:5765..58471681464148.7056553-UTR-Ecto-sp13_S_contig8759:5765..5847Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8759 5766..5847 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8759.20232.1

>prot_Ecto-sp13_S_contig8759.20232.1 ID=prot_Ecto-sp13_S_contig8759.20232.1|Name=mRNA_Ecto-sp13_S_contig8759.20232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=538bp
MYLSTRDRVKPCRVVALTRKPTPGPASPPRISISMERRRGLSLRTTPDPH
AANRTARVGGDKIKHRRVGMDRNLGRPGSRTPGDKDGSGGNSNDKETVQS
GDETDIPSPLSSRASSSAEMDQDTTTTTSANSSSSDESGNSSSSSSSGSS
SGSIGERSSSGESASEGGMTSATVRPTMPQKNVAASRKKRSVLTAIACRQ
LAAATSKQTRPSAWAMKPTESRRQAAERRPPAAKVYPRAKAAAGAPSKTT
AIVKSKSSRPKGTTTSKTVVKGGDGGSGRSPSRKRETPRVSASRHMAWER
QLRASTTAGASNPDRTRDAAGHRGRQKANKKGGGEEDGRPSLGTWEKTIV
RLEILKKITGKGDEELQWLCSAKQGDGIQKSETRRDCAETDYHRLLFQES
MLQAGMEILKDRRLEVSLKTLAKMGGDLGRLTKLHEQLAEEEASLTTVNA
EDKVDGHEVTTAEEESASASAAVMASLQRDRLGQARVDAEAELRRVLEGI
SSAQEKVLRVGHGLKEEVAGGTRKVFGECKSALETAIG
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mRNA from alignment at Ecto-sp13_S_contig8759:61..5847-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8759.20232.1 ID=mRNA_Ecto-sp13_S_contig8759.20232.1|Name=mRNA_Ecto-sp13_S_contig8759.20232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5787bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8759:61..5847- (Ectocarpus species13 EcNAP12_S_4_19m)
ACACAACCAGCTGCAACAGATCTAATTTGTACCTTGAAAGCGCAGCAAAG
CTACGCTTTCGGGAAAGCAGGACACATCCACCATGTACCTGTCGACGCGG
GATCGCGTCAAGCCATGTCGGGTAGTCGCCCTCACAAGAAAGCCAACCCC
AGGACCAGCTTCCCCGCCGAGGATCAGCATCAGCATGGAGCGACGGCGAG
GCCTGTCCCTGAGAACGACACCCGACCCCCATGCTGCTAATCGAACCGCA
CGGGTCGGAGGGGACAAGATCAAGCACCGCCGTGTCGGTATGGTGAGTCA
ACGGTATACTGCTGCTGTATAGGCAGGTCCGGGTGAACGCGTGCTGCTGA
TCGGTGTCAGGTGATGCCATGCATGGGTATCATGTCCGGTAGCTCGCGTT
AATTATTGATGCCTCGGCCGATCTAGAAAGACCAAGAATGCTCCAGTCAT
CGCCGGTCGATCGCTGTAGGGCGGCGGCCTTGTAGATGTGGTATGTATTC
CCGCACACCACTGTTGTTCCAACGCTAATCACCTCCTCCTCCTTTTTCGC
GGCTGATCGGTCGACTGCCTGCTGCGAAAGCTCGCGAAGTACGTAGACGG
GTTTCTTTTATGGCATATTTGAAGCTGAAAAGTGGAACCGATGTCTTGTT
GAAGGTCTACAGTAGCATATGGGAGATATTGGGCTCGCCCCCGACATCCC
TACATCGGTCCGGCCTACACCCTCACGTTGCCACGGGTGGTTGACCTTGC
CCTACTGTAGGCCTTTGCGATTCGATTGACGGCATTGCGGTCGACTGACA
AACGGCCTTGCCGTCGACTGACAGACGGCATTGCTTTCAACTGACAGACG
GCATTGTCGTCGACTGACATCCTCGGCTGTAGCCGTGCTGGCCGCCCCTG
CGTCGTAATCCCTGGCGCCCCGGTCTGTTGTTCGTGTCTTGTCTGTACGT
AGTGAGACATGCGATCGCAAACACGAGCGACAGACCGGCGCCGGGAATTA
CAACCCAGCGGCGGCCATCAAGGACATCGCTGAGGGTGTCACCCGACCTC
AATCCCGACCGAACTGCGCGGGTCGGTAGCAAGATCAAGCACCGTGGCGG
CACGGTGAAAGAGGGTTTCGGCCGATCGAGATGTCGGGTTGTCAGATTTT
GTTAATTTTTGTCTCGGCTTGTCTTAGAGTGAAAAGAAAATTGAAACAAA
AGCAAGAGAGACTATGAGTACATAATTAGTCTACATGTGCTAGCCTATCG
CGTCCGTATCTACTTACGTCACTGCCTCTCGATAGCTCTACACAGGGCGT
GCGTTCTAGCATGTATGTACCCCTCGTATTTTTGTTTCAGGCCTCCAAGC
GAAGCATCTGCATCTCCTTTTTCACGGCTGATCGGTGGACTCTTCGCGAA
AGGCCAAGTGTAGGTCAAAAAAACCAATACAACAGTTCAAAGTTGTGTGC
ATGTACTTATTCCATAACTTTGGCATTGATTTGATCATTGATTATTAGTT
GGGGATGTATTGTAAAATGTAGGTTACCTATACAGATGTTATTGTACTTA
GCACCAGCTGGCATCACTCATATAAATCATCAGTGTATAGACTCAGAAAG
ACTCGAAATAAGTCCAGTACCCAGCCGGTTTTCCTTCACTCACTGAAAAG
ACTCCACCACATCTCATTTGACTGTGGGTATATCTCGAATGGTATGCACT
TGTTCCATAATATGGCGTTGAATTGGTATTTAATTATTTGTTTTGGATGG
TGCGATCGATCCGATGTCAGGATGAGTCGCATCGAAAATTTAATGCTTCT
GTAAACCCTGTTCGACACCCCTGAGCGTTCGTGTTTTCTGAAGAAAGGCC
TCGCACCCAACCCGCACAAGAGACTGCATCGCATTTTAACTGCTCCAATT
AAATCGCGACAAGGTTCGAGCAAATCCTCTTGCCTTCTCTTACACAACGA
ACAAGACATATTACAGATGGGATTCGATATGGTCCTCCCGCTACGTGAAA
CGTTATGCAGCTTATATCGCCACTTATCTTCAACTCCTTGGTCACGCCTT
CTCCCCTCCTGAAAACAACAACACCCCAACAGGACCGTAACTTGGGGAGA
CCGGGCTCCAGGACACCCGGGGACAAGGACGGCAGTGGCGGTAACAGCAA
CGACAAGGAGACCGTGCAGTCTGGCGATGAGACGGACATCCCGTCACCAC
TGTCCTCGCGAGCTTCTTCGTCGGCGGAGATGGACCAGGACACCACCACC
ACCACCAGCGCCAACAGCAGCAGCAGCGATGAGAGCGGCAACAGTAGTAG
CAGCAGCAGCAGCGGCAGCAGCAGCGGCAGCATCGGTGAGAGAAGCAGTA
GTGGTGAAAGTGCTAGCGAAGGAGGTAGCGCCTGCCCTGACACCAGGCTA
CCCACCACCGTGTCCATGTCCACAACCATGGTTTTCTGATCGGGAGATGT
TCGAATCTACGGCAGCCAAGACCAAACGATACATACAACAACACAGCACA
CTTGTGGTTGTTGTCTTCACAAAACATCACTGCGCGCGAAACATGAAACA
TTCCTCTCTCCGTCAGTGGTACAACTACGACCACAACCAACCGCTATCTT
TGTTCTATGGTCACGAGAGCAATTTTAACGCACCCTCACTGAAACAACCG
CTAATCCATGTTTCATGTTTACAAAAGCAATTTAAACGCACCCTGACATC
CGCCTCTGGGCGCCTCACCTTTTTGTTTTTTTTCCTCCAGCAGGGATGAC
GAGCGCGACCGTCAGACCCACGATGCCCCAGAAAAATGTCGCCGCCTCCC
GCAAGAAACGGTCTGTTCTCACTGCGATCGCGTGCAGACAGCTCGCCGCC
GCGACCTCGAAGCAGACCAGGCCGTCCGCATGGGCGATGAAGCCCACCGA
GTCCCGCCGGCAAGCTGCGGAGCGACGGCCGCCCGCGGCAAAGGTGTACC
CCAGGGCGAAAGCGGCAGCGGGTGCACCTTCGAAGACGACGGCAATTGTC
AAGTCGAAGTCATCGAGGCCTAAGGGTACTACTACGTCGAAGACGGTGGT
CAAAGGAGGCGATGGAGGGAGTGGGAGAAGCCCCAGCAGGAAGCGCGAAA
CACCCAGGTGAGTGCTTGATGGTTGATGGTTGTACTCCTGCGGGCGTTAT
TGCCGCTGCACGTTTGAGTCCACAACGACGGGTGGCACACGTTCGATAGC
TACGGGACACGTGGGTGTGTTGCATACACCGAAGCACGCACCCCTTTTTT
CGTTTTTACTCGCCTTATCGTCCGTCCCCTTCAGCTTGTCTACTTGTGTG
CGACACGTGCGCGGCCAACAACTGCTTCTGATACATACGGGTACATGGCC
GGACAAAACCAGTACCACACACCTTTTGTTCTTCATCCTGTTGCGCCTCT
CCGCGACCTTGGGACATGATTCGCAAGACGAAATGCTCGAGCGTTGTGCT
GCACTTGGCTTTCTGTCCCAATATGACGTCACCAATTCTTCTTGAACAGG
GTCTCCGCCTCCCGCCACATGGCCTGGGAGCGTCAACTCAGGGCATCGAC
GACAGCAGGGGCCAGCAATCCCGACCGTACGAGGGACGCGGCGGGTCACC
GGGGACGGCAGAAGGCCAACAAGAAAGGCGGTGGCGAGGAGGACGGCCGG
CCATCCCTCGGCACCTGGGAGAAGACCATCGTCCGACTGGAGATCTTGAA
AAAGATCACAGGAAAGGTGAACTTGTTGTGTTTCTTTCAAGACGGTTTGG
AGATCTTGAAAAAGATCGCAGGAAAGGCGAACTTGTTCTGATTTTTCCAA
GACAGTACGGAGACCTTGATAAAGATCACAGGAAAGGTGAGCTTGTTCTG
CTTTTATGGAGACTCTTGTTTTTTTTCCATCCGCTGTAGTGGTAAGAGCG
ATTGCCCTACCGGTGGCAGGAGTAGACGTGCGTAGCTGCCTTGTGACGAT
TGCCTTCCTGCAGTGACGCCCACAGCTCGCGACACGGCAACCACGAGTCG
TCTTGCTCCGGCCGACTTTTTGAGCATTTCTGTCGTCGACCTCTCCATGC
AGTGCGCCGTCGATTTATCGTCTAGACGACTTGGGGCTGGGGCTATTGTA
AGGTTTCCTTGCTTCCAGCATGTGTCGCTTCCCTGCACAGGTGCCATCCT
TTACCACGCTGGGTGCTTTTCCGCCTACTGTCTCTTATTTTCGTGTGAGC
TCGCGTTTTCTTAAGGGGCTGTCAACTAATTATTTCCTGCTCGCATGTGT
ATCCCCTGGATACTTTTCGTCTGGGCGGCCGGTATCGTCTGAACTGCAGG
GCGATGAGGAGCTGCAGTGGCTCTGCTCGGCAAAACAGGGGGACGGGATC
CAGAAGAGCGAGACCCGGAGGGATTGTGCGGAGACCGACTACCACCGCCT
CCTGTTCCAAGAATCCATGCTGCAGGTAGGCGTGGCAAAGAGTCCGGCAA
TCAAAATTGAGCTCTACCCTGTTTTTTTTTTGTGTCCTTGACCAATCAAA
GCTCGATTTTGGTTTGTAATTTTGCTTGATGGAACATCGCTTACACCCGA
CCTCTGTATTAACCTACCTCCATTAATTTTCTTTCTGGCCGCCTCGTGTT
TTGTTTTCGACGCTGACGCGAACGTTCGACAGGCGGGCATGGAGATCCTC
AAGGACCGCCGGCTGGAGGTGTCCCTCAAGACCCTCGCCAAGATGGGAGG
AGACCTCGGACGCCTGACCAAGCTTCACGAGCAGCTTGCGGAAGAGGTCG
GTGGTGTGATACGCATAGTCTCGCTTCCTCCTTCTCGCCACGGCTGTGGT
AGTATGTATGTTTCGCCAGTACCCACATCTTCTCTCTGACTGTTCTCATG
CTTTCTCCACACTCCGTTTCGTGATGCTGTGTCGTGAGCTTTCGGAACAT
GTGATAGGAAGCGGTAAGGTTGTGAGACCCTCGTCCTACAACAATACCTC
GTTTAGATTGCCCACATCCAGTGTTACGGTGTTACCTTTACAGCAGTCAT
TCTTTCTCCCTTCCCAATACCATGATGTGGTTGTGCTCTTTTACTTTCGC
TGCCCTTGAGAACTCTGTTTTTTTTGTCGTTGCGGTACCTCACGTGGACT
CTATATTTTCCCACGGTTGACGCTACATACCCAGTACACGTTTTCCTCTG
AACCAAACAACAGAAATCGCAAATGAAGGAAGGAGGCACATTCAAGTAAA
ACCAAGACACGCGCATGCACATACGCCTTTTGTGGAGTCAAGGTCGAAAC
GCTACCTGGTCCCTCACGTCAACCTACGATACACACGTCCGATTCATCCC
GTCGTACTCTACCATTGAACGTTGGGCTTCATCTTGCAGACATGCCGTAT
CCCTGTACCCACATACACCCCTTGGAAACCAAAGCCATCACCACCTCCCG
GTAAATGACCTATTTCGAATGAGTGTTTACCATCCACTAACATGAAACGT
TTACTCCTGCTGCTGTTGCACCCCCGCTGTCTACCCGTACAAGCAGGAGG
CGTCTCTCACGACCGTCAATGCTGAGGACAAGGTCGACGGGCACGAGGTC
ACCACGGCGGAGGAAGAGTCAGCGTCGGCGTCGGCGGCGGTGATGGCCTC
GCTGCAAAGAGACCGCCTCGGGCAGGCCAGGGTCGATGCCGAGGCCGAGC
TTCGCAGAGTGTTGGAGGGCATCTCAAGTGCACAGGAGAAGGTCCTCCGT
GTGGGACACGGCCTGAAGGAGGAAGTTGCGGGCGGGACGAGGAAGGTCTT
CGGGGAGTGCAAGAGCGCGCTGGAGACAGCCATCGGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8759:61..5847-

>mRNA_Ecto-sp13_S_contig8759.20232.1 ID=mRNA_Ecto-sp13_S_contig8759.20232.1|Name=mRNA_Ecto-sp13_S_contig8759.20232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1614bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8759:61..5847- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTACCTGTCGACGCGGGATCGCGTCAAGCCATGTCGGGTAGTCGCCCT
CACAAGAAAGCCAACCCCAGGACCAGCTTCCCCGCCGAGGATCAGCATCA
GCATGGAGCGACGGCGAGGCCTGTCCCTGAGAACGACACCCGACCCCCAT
GCTGCTAATCGAACCGCACGGGTCGGAGGGGACAAGATCAAGCACCGCCG
TGTCGGTATGGACCGTAACTTGGGGAGACCGGGCTCCAGGACACCCGGGG
ACAAGGACGGCAGTGGCGGTAACAGCAACGACAAGGAGACCGTGCAGTCT
GGCGATGAGACGGACATCCCGTCACCACTGTCCTCGCGAGCTTCTTCGTC
GGCGGAGATGGACCAGGACACCACCACCACCACCAGCGCCAACAGCAGCA
GCAGCGATGAGAGCGGCAACAGTAGTAGCAGCAGCAGCAGCGGCAGCAGC
AGCGGCAGCATCGGTGAGAGAAGCAGTAGTGGTGAAAGTGCTAGCGAAGG
AGGGATGACGAGCGCGACCGTCAGACCCACGATGCCCCAGAAAAATGTCG
CCGCCTCCCGCAAGAAACGGTCTGTTCTCACTGCGATCGCGTGCAGACAG
CTCGCCGCCGCGACCTCGAAGCAGACCAGGCCGTCCGCATGGGCGATGAA
GCCCACCGAGTCCCGCCGGCAAGCTGCGGAGCGACGGCCGCCCGCGGCAA
AGGTGTACCCCAGGGCGAAAGCGGCAGCGGGTGCACCTTCGAAGACGACG
GCAATTGTCAAGTCGAAGTCATCGAGGCCTAAGGGTACTACTACGTCGAA
GACGGTGGTCAAAGGAGGCGATGGAGGGAGTGGGAGAAGCCCCAGCAGGA
AGCGCGAAACACCCAGGGTCTCCGCCTCCCGCCACATGGCCTGGGAGCGT
CAACTCAGGGCATCGACGACAGCAGGGGCCAGCAATCCCGACCGTACGAG
GGACGCGGCGGGTCACCGGGGACGGCAGAAGGCCAACAAGAAAGGCGGTG
GCGAGGAGGACGGCCGGCCATCCCTCGGCACCTGGGAGAAGACCATCGTC
CGACTGGAGATCTTGAAAAAGATCACAGGAAAGGGCGATGAGGAGCTGCA
GTGGCTCTGCTCGGCAAAACAGGGGGACGGGATCCAGAAGAGCGAGACCC
GGAGGGATTGTGCGGAGACCGACTACCACCGCCTCCTGTTCCAAGAATCC
ATGCTGCAGGCGGGCATGGAGATCCTCAAGGACCGCCGGCTGGAGGTGTC
CCTCAAGACCCTCGCCAAGATGGGAGGAGACCTCGGACGCCTGACCAAGC
TTCACGAGCAGCTTGCGGAAGAGGAGGCGTCTCTCACGACCGTCAATGCT
GAGGACAAGGTCGACGGGCACGAGGTCACCACGGCGGAGGAAGAGTCAGC
GTCGGCGTCGGCGGCGGTGATGGCCTCGCTGCAAAGAGACCGCCTCGGGC
AGGCCAGGGTCGATGCCGAGGCCGAGCTTCGCAGAGTGTTGGAGGGCATC
TCAAGTGCACAGGAGAAGGTCCTCCGTGTGGGACACGGCCTGAAGGAGGA
AGTTGCGGGCGGGACGAGGAAGGTCTTCGGGGAGTGCAAGAGCGCGCTGG
AGACAGCCATCGGT
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