prot_Ecto-sp13_S_contig8756.20230.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8756.20230.1
Unique Nameprot_Ecto-sp13_S_contig8756.20230.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length177
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8756.20230.1 vs. uniprot
Match: D7FUN7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUN7_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 1.270e-96
Identity = 165/175 (94.29%), Postives = 168/175 (96.00%), Query Frame = 0 
Query:    3 EQESKEVSKIHGRMSKDLARAADRNRGSKQSACPFALVVKVLSKQDAEGLGYIKASEFKRSLETLGFGGLSAAEKSLLVRRFDPVEEGTITYEVFAAWLSSGLDPDRLTAKLGRLLGQLTGRQTRSGGEKKKGETADNKGARDRAIKKRLPGGVRGLFEEFDEDGAGAVSRHDMK 177
            EQESKEVSKIHGRMSKDLARAADR+RGSKQSACPFALVVK LSKQDAEGLGYIKAS+FKRSLE LGFGGLSAAEKSLLVRRFDPVEEGTITYEVFAAWLSSGLDPDRLT KLGRLLGQLTGRQTRSGGEKKKG+TADN GARDRAIKKRLPGGVRGLFE FDEDG G VSRHDMK
Sbjct:  324 EQESKEVSKIHGRMSKDLARAADRSRGSKQSACPFALVVKALSKQDAEGLGYIKASDFKRSLERLGFGGLSAAEKSLLVRRFDPVEEGTITYEVFAAWLSSGLDPDRLTVKLGRLLGQLTGRQTRSGGEKKKGKTADNNGARDRAIKKRLPGGVRGLFEGFDEDGVGTVSRHDMK 498
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BLAST of mRNA_Ecto-sp13_S_contig8756.20230.1 vs. uniprot
Match: A0A835YKB5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKB5_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.440e-11
Identity = 39/116 (33.62%), Postives = 65/116 (56.03%), Query Frame = 0 
Query:    9 VSKIHGRMSKDLARAADRNRGSKQSACPFALVVKVLSKQDAEGLGYIKASEFKRSLETLGFGGLSAAEKSLLVRRFDPVEEGTITYEVFAAWLSSGLDPDRLTAKLGRLLGQLTGR 124
            ++++  R++ DLA   D+ R +++   P  +  +   K +A G G + +++F+R  E L  G L+  + + L+ RFDP EEG ++Y+ FA W + G D  R   KLGR L  L  R
Sbjct:    1 MAELQARIAVDLA---DKARRAERP--PLEVARRAFRKFNAAGSGVVGSADFRRGAERLRCGALTPGDIAALLSRFDPAEEGKVSYDAFAVWAAGGCDAARALEKLGRCLALLRAR 111
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8756.20230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUN7_ECTSI1.270e-9694.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YKB5_9STRA1.440e-1133.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 53..97
e-value: 1.8E-4
score: 21.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 35..70
score: 6.396
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 151..177
score: 8.265
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 43..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8756contigEcto-sp13_S_contig8756:4692..6422 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8756.20230.1mRNA_Ecto-sp13_S_contig8756.20230.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8756 4661..6422 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8756.20230.1 ID=prot_Ecto-sp13_S_contig8756.20230.1|Name=mRNA_Ecto-sp13_S_contig8756.20230.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=177bp
MREQESKEVSKIHGRMSKDLARAADRNRGSKQSACPFALVVKVLSKQDAE
GLGYIKASEFKRSLETLGFGGLSAAEKSLLVRRFDPVEEGTITYEVFAAW
LSSGLDPDRLTAKLGRLLGQLTGRQTRSGGEKKKGETADNKGARDRAIKK
RLPGGVRGLFEEFDEDGAGAVSRHDMK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair