prot_Ecto-sp13_S_contig875.20223.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig875.20223.1
Unique Nameprot_Ecto-sp13_S_contig875.20223.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length340
Homology
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI)

HSP 1 Score: 436 bits (1120), Expect = 4.640e-136
Identity = 232/338 (68.64%), Postives = 263/338 (77.81%), Query Frame = 0
Query:    1 MMNGRNVSLFSLAILSGSREAVKLIFDLVVRVFGYDRSYRNGHRVVRFVDADGGDQAXXXXXX-DQCNRLH-DTIWSILTGRSNATSSLTCAASVSMEADGEGRTMFGLVYDLLEKQAMQGARMRKFRELLSPVPVPF---STTMKPTISPLAGAVFSSNWVLFREVYDRYEKLAGCCWLRETVLSQIPPGPPHDRCVLDDEDLHECHEHVPPLITRGAWTIPAVMWPDIVKAYQRGQPQTPQDSYSSCGTRHEPLPSWRDDFKHYSRRGVKVAADWGNFAGLRELVHEGFPLHDDHIRSLLENIGDHEQDVMDTILDAVASSSRKGA-AQNSYKTLR 332
            M+N RNVSLFSLAILS   EAV+LIFDLVVR+FG D+S RN  R VRF D D GDQ        D+ N+ H DTIWSILTG S+ TSSLTCAASVSMEADG GRTMF LV+++LEKQ  +G   +KFRELLSP  +     ST  + +ISPLAGAVFSSNWVLFREVYDRYEKLAGCCW RETVL QIP GPPH R VL DE+LHE H+++PPLITRGAWTIPAVMWPDIVKAY+RG+P   ++ Y  CG +H+ L SWRDDFKHYSRRG KVAA  G+F  LRELV+EGFPLHDDH+  LLENIGDHE DV+DTIL AVAS+S   A A    +TLR
Sbjct:  474 MINSRNVSLFSLAILSRRHEAVELIFDLVVRLFGEDQSSRNDQRAVRFRDGDDGDQGHQGQGQRDRGNQPHHDTIWSILTGHSHTTSSLTCAASVSMEADGNGRTMFCLVFEMLEKQFRRGVGEKKFRELLSPKSMTLKSSSTDQEHSISPLAGAVFSSNWVLFREVYDRYEKLAGCCWQRETVLKQIPQGPPHGRSVLKDEELHEYHDNIPPLITRGAWTIPAVMWPDIVKAYKRGEPDD-REGYCCCGRQHQRLLSWRDDFKHYSRRGAKVAAKRGDFTALRELVNEGFPLHDDHMPFLLENIGDHEHDVIDTILAAVASTSNPFAMAAGVSRTLR 810          
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 5.470e-78
Identity = 154/320 (48.12%), Postives = 200/320 (62.50%), Query Frame = 0
Query:    2 MNGRNVSLFSLAILSGSREAVKLIFDLVVRVFGYDRSYRNGHRVVRFVDADGGDQAXXXXXXDQCNRLHDTIWSILTGRSNATSSLTCAASVSMEADGEGRTMFGLVYDLLEKQAMQGARMRKFRELLSPVPVPFSTTMKPTISPLAGAVFSSNWVLFREVYDRYEKLAGCCWLRETVLSQIPPGPPHDRCVLDDEDLHECHEHVPPLITRGAWTIPAVMWPDIVKAYQRGQPQTPQDSYSSCGT--RHEPLPSWRDDFKHYSRRGVKVAADWGNFAGLRELVHEGFPLHDDHIRSLLENIGDHEQDVMDTILDAVASSS 319
            +N R  S+FS AILSG  +A++L++DLV  +FG                             D+ ++  DT    L+G++N +SSLTCAAS SMEAD  G TMF  V+ LL++Q     R+   R+L     +P     K  ISPL GA FSSNW+LFR+VYD YE+  G  W R+ VL+QIP GPP  R VL+ +++H+C + +P LI RGAW+IPAVMW DIVKAYQR Q  +P  +        R  PLPSWRD+FK YSRR VK AA  G F  LR+LV EGFPLH+ HI +LLENIGDHE+D+++TIL  V ++S
Sbjct:  454 INTRGKSVFSYAILSGRTDAMELVYDLVRGLFG-----------------------------DKTSQTWDT----LSGKTNKSSSLTCAASASMEADNHGITMFDKVFSLLQQQTDD--RLLVQRQLSPRFAMPHRGKGKVKISPLVGAAFSSNWILFRKVYDTYEEWTGHRWWRQQVLAQIPSGPPRRRSVLELQEMHDCEDDIPALIIRGAWSIPAVMWRDIVKAYQRAQLCSPDATSRGVPQPLRINPLPSWRDEFKGYSRRAVKEAAKRGTFRSLRDLVQEGFPLHEHHIPALLENIGDHEKDIIETILATVTNAS 738          
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Match: D8LH97_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 9.160e-38
Identity = 121/335 (36.12%), Postives = 146/335 (43.58%), Query Frame = 0
Query:    8 SLFSLAILSGSREAVKLIFDLVVRVFGYDRSYRNGHRVVRFVDADGGDQAXXXXXXDQCNRLHDTIWSILTGRS------NATSSLTCAASVSMEADGEGRTMFGLVYDLLEKQAMQGARMRKFRELLSPVPVPFSTTMKPTISPLAGAVFSSNWVLFREVYDRYEKLAGCCWLRETVLSQIPPGPPHDRCVLDDEDLHECHEHVPPLITRGAWTIPAVMWPDIVKAYQRGQPQTPQDSYSSCGTRHEPLPSWRDDFKHYSRRGVKVAADWGNFAGLRELVHEGFPLHDDHIRSLLENIGDHEQDVMDTILDAVASSSRK-GAAQNSYKTLRSQR 335
            SLFS AILSG   AVK ++ L+V++FG                                 + H   W+ILTGR          S L CAAS SME    GR  F LVY  L+  A      +K R  L P P P   T K  ISPL GA FSSNW+LF  VYD Y  LA   WLR   L +                                                         S  S G   E L SWR+  + YS R V VA++ G F  LR+LV EGFPLHDDHI +LL +IGDHEQD+++T+L AVA++S   G A    + LR  R
Sbjct:  437 SLFSEAILSGQTVAVKHVYRLIVKLFG---------------------------------KTHPETWAILTGRDFNSGKVAEASPLACAASASMEPCDHGRDTFDLVYSYLQTHAPDE---KKLRIQLVPQPPPLDLTAKTQISPLVGAAFSSNWILFWRVYDTYTTLAKKPWLRTNALRRAT-------------------------------------------------------SDKSGG---EELMSWREYLRAYSSRAVHVASERGAFTDLRDLVKEGFPLHDDHIPALLVSIGDHEQDIIETVLFAVANASNPFGMAAGVSRFLRRAR 677          
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 2.780e-36
Identity = 95/267 (35.58%), Postives = 143/267 (53.56%), Query Frame = 0
Query:   68 RLHDTIWSILTGRSNATSSLTCAASVSMEADGEGRTMFGLVYDLLEKQAMQGARM-----RKFRELLSPVPVPFS---------TTMKPTISPLAGAVFSSNWVLFREVYDRYEKLAGCCWLRETVLSQIPPGPPHDRCVLDD-EDLHECHEHVPPLITRGAWTIPAVMWPDIVKAYQRGQPQTPQDSYSSCGTRHEPLPSWRDDFKHYSRRGVKVAADWGNFAGLRELVHEGFPLHDDHIRSLLENIGDHEQDVMDTILDAVASSS 319
            R    +W  + G  +  ++LTCA+S SM+ + +G  +   VY  L++ A           +  +EL     +P           TT++ + +PLAGA  S NWVLF+++Y+ YE+L    W RE +L  +P     D+ +L   + +HEC  HV     RG   + AV+W D+V+AYQR + +      S        +PSWRD FK  SR+ V +AA+ G F  LRELV  G PLHDD I +LL +  D E++VMD ++ AV ++S
Sbjct:  468 RYPKELWKNVRGAQDKINALTCASSSSMKCERQGVEVLVAVYSCLQEAAKYEFGTPEDVTKNLKELFLSRSLPMKPTGSKSSARTTVESSSTPLAGAALSGNWVLFQKIYEMYERLTDQRWSREELLRHLPIAS-QDKIMLGQCQAMHECDPHVHTSFGRGVGNVTAVIWRDLVEAYQRAEVKCAVIELSEMSD----IPSWRDTFKSLSRKAVGLAAERGAFDDLRELVKAGLPLHDDLIPTLLTSAED-EEEVMDIVMYAVGNAS 728          
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Match: D7FNX3_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX3_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 3.350e-34
Identity = 86/248 (34.68%), Postives = 123/248 (49.60%), Query Frame = 0
Query:   68 RLHDTIWSILTGRSNATSSLTCAASVSMEADGEGRTMFGLVYDLLEKQAMQGARMRKFRELLSPVPVPFSTTMKPTISPLAGAVFSSNWVLFREVYDRYEKLAGCCWLRETVLSQIPPGPPHDRCVLDDEDLHECHEHVPPLITRGAWTIPAVMWPDIVKAYQRGQPQTPQDSYSSCGTRHEPLPSWRDDFKHYSRRGVKVAADWGNFAGLRELVHEGFPLHDDHIRSLLENIGDHEQDVMDTILDAV 315
            R    +W  + G     S LTCA+S SM+++  G  +   VY  L + +                            +PLAGA  S NWVLF+ VY+ YE L G  W R+ +L  +P        + + + +HEC  HV   + RGA  + AVMW D+V+AYQR + +  ++  S        +PSWR  F   S + V+ A + G F  LRELV EG PLHDD I +LL+   D + +VMD ++ AV
Sbjct:  463 RCPHQLWENVRGAQGKISPLTCASSSSMKSESHGTEILVAVYTCLRESSS---------------------------TPLAGAALSGNWVLFQRVYNMYESLTGRRWSRDELLGHLPIASQEKIILGEPQAIHECAPHVHTSLGRGAGNVTAVMWRDLVEAYQRAEGEASEEGISE-------VPSWRQTFMSLSGKAVRSATENGTFDDLRELVKEGLPLHDDLIPTLLKRAED-QGEVMDIVMYAV 675          
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Match: D7FX79_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 4.190e-30
Identity = 90/271 (33.21%), Postives = 133/271 (49.08%), Query Frame = 0
Query:   68 RLHDTIWSILTGRSNATSSLTCAASVSMEADGEGRTMFGLVYDLLEKQA----------------------MQGARM---------RKFREL-------LSPVPVPFS--TTMKPTISPLAGAVFSSNWVLFREVYDRYEKLAGCCWLRETVLSQIPPGPPHDRCVLDD-EDLHECHEHVPPLITRGAWTIPAVMWPDIVKAYQRGQPQTPQDSYSSCGTRHEPLPSWRDDFKHYSRRGVKVAADWGNFAGLRELVHEGFPLHDDHIRSLL 297
            R    +W  + G  +  ++LTCA+S SM+ + +G  +   VY  L++ A                       + A+          R  ++L       + P     S  TT+K + +PLAGA  S NWVLF+ +Y+ YE+L    W RE +L  +P     D+ +L   + +HEC  HV     RG   + AV+W D+V+AYQR +  + +   S        +PSWRD FK  SR+ V++AA+ G F  LRELV  G PLHDD I +LL
Sbjct:  459 RYPQELWKNVRGAQDKINALTCASSASMKCERQGVEVLVAVYSCLQEVAEKYLICVTSGHIKRVHQVRDSRREAAKCEFKTHEDITRNLKDLFVSRSHTMQPAGSKSSARTTVKSSSTPLAGAALSGNWVLFQRIYEMYERLTDQRWSREELLRHLPIAS-QDKIMLGQCQAMHECGRHVHTSFGRGVGNVTAVIWRDLVEAYQRAEVTSAEIEGSEEVI--SDIPSWRDTFKSLSRKAVRLAAERGAFDDLRELVKAGLPLHDDLIPTLL 726          
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Match: A0A6H5JNN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN7_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 3.930e-15
Identity = 67/178 (37.64%), Postives = 78/178 (43.82%), Query Frame = 0
Query:    8 SLFSLAILSGSREAVKLIFDLVVRVFGYDRSYRNGHRVVRFVDADGGDQAXXXXXXDQCNRLHDTIWSILTG------RSNATSSLTCAASVSMEADGEGRTMFGLVYDLLEKQAMQGARMRKFRELLSPVPVPFSTTMKPTISPLAGAVFSSNWVLFREVYDRYEKLAGCCWLRETV 179
            SLFS AILSG   AV+ ++ L+V++FG                                       W+ILTG      +    S L CAAS SME    G  MF LVY  L+  A     +     L+  VP P     K TISPL GA FSSNWVLF  VYD Y  LA   WLR  V
Sbjct:  446 SLFSQAILSGRTVAVEHVYLLIVKLFG---------------------------------ETDPETWAILTGIDLLSGKVAEASPLACAASASMEPSDHGSKMFDLVYSYLQTHAPNEEEL-----LIQLVPKPPHYEPKTTISPLVGAAFSSNWVLFWRVYDTYTTLAKKPWLRTNV 585          
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Match: A0A6H5JTH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH2_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 3.500e-5
Identity = 41/99 (41.41%), Postives = 50/99 (50.51%), Query Frame = 0
Query:   88 TCAASVSMEADGEGRT-MFGLVYDLLE------KQAMQGARMRKFRELLSPVPVPFSTTMKPTISPLAGAVFSSNWVLFREVYDRYEKLAGCCWLRETV 179
            T A SV   A   GRT    LVYDL+        +     R+R  R+L   V +P     K   SPL GA FSSNW+LF++VYD YE   G  W R+ V
Sbjct:  468 TRAKSVFSYAILSGRTDAMELVYDLVRGLFGNYTEVQTDDRLRLQRQLSPSVSMPHRGKGKVK-SPLVGATFSSNWILFQKVYDTYEAWTGHRWWRQNV 565          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LHA0_ECTSI4.640e-13668.64Transient Receptor Potential Channel. Partial sequ... [more]
D8LH99_ECTSI5.470e-7848.13Ankyrin Repeat Transient Receptor Potential Channe... [more]
D8LH97_ECTSI9.160e-3836.12Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5JB40_9PHAE2.780e-3635.58Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FNX3_ECTSI3.350e-3434.68Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FX79_ECTSI4.190e-3033.21Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5JNN7_9PHAE3.930e-1537.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTH2_9PHAE3.500e-541.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..339
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig875contigEcto-sp13_S_contig875:9895..16287 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig875.20223.1mRNA_Ecto-sp13_S_contig875.20223.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig875 9881..19916 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig875.20223.1 ID=prot_Ecto-sp13_S_contig875.20223.1|Name=mRNA_Ecto-sp13_S_contig875.20223.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=340bp
MMNGRNVSLFSLAILSGSREAVKLIFDLVVRVFGYDRSYRNGHRVVRFVD
ADGGDQADQAEQGDQCNRLHDTIWSILTGRSNATSSLTCAASVSMEADGE
GRTMFGLVYDLLEKQAMQGARMRKFRELLSPVPVPFSTTMKPTISPLAGA
VFSSNWVLFREVYDRYEKLAGCCWLRETVLSQIPPGPPHDRCVLDDEDLH
ECHEHVPPLITRGAWTIPAVMWPDIVKAYQRGQPQTPQDSYSSCGTRHEP
LPSWRDDFKHYSRRGVKVAADWGNFAGLRELVHEGFPLHDDHIRSLLENI
GDHEQDVMDTILDAVASSSRKGAAQNSYKTLRSQRSGAR*
back to top