mRNA_Ecto-sp13_S_contig875.20223.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI) HSP 1 Score: 952 bits (2460), Expect = 0.000e+0 Identity = 528/815 (64.79%), Postives = 596/815 (73.13%), Query Frame = 3
Query: 114 QRMQKAMYHLRRCIRDPEKDVKKGLKEVKDKVGEGLESLFDEALQSKCPEDGQNVLFYAAAQGNKAWFLELVHVIRSRVGIHALVKELRETDIDGVPLLFHAASSRRKYCCFRTVYDLVFSVLGKGGIMEQFEALDGLGRGILMHAARSNHINTFKDVFRKCRNAAESIRLHDRSNPVANYGRTEVTEGTLHGFSGERPPDFSTRTTKGSADGRLLREVLGKVDRKGMTCLHHAAEAGSSEVLREVVKIGGSLWKDFGASDRSGRTPIMLVLRNAFCCEDEEHTCGETDLADKFGILFDEIPWG---RTPLHRVDATVAR*DSVP---PSPKAYTL*DSGGDGADACCTRRRGVV-------RASPEQASAELQDRF*GWFQGKPQQSTC-------GRRVHRRQLEAIASPAPLYCNLGK-GLTTGSGHVLVAIENDEFVLTADDEGEFRLPDAPKQTDETPTEFPVGTNVLEVLEMMNGRNVSLFSLAILSGSREAVKLIFDLVVRVFGYDRSYRNGHRVVRFVDADGGDQAXXXXXX-DQCNRLH-DTIWSILTGRSNATSSLTCAASVSMEADGEGRTMFGLVYDLLEKQAMQGARMRKFRELLSPVPVPF---STTMKPTISPLAGAVFSSNWVLFREVYDRYEKLAGCCWLRETVLSQIPPGPPHDRCVLDDEDLHECHEHVPPLITRGAWTIPAVMWPDIVKAYQRGQPQTPQDSYSSCGTRHEPLPSWRDDFKHYSRRGVKVAADWGNFAGLRELVHEGFPLHDDHIRSLLENIGDHEQDVMDTILDAVASSSRKGA-AQNSYKTLR 2477
QRMQKAMY LRRCIRDPEKDV+KGL+EV+ +VGEGLESL DEALQSK PEDGQNVL YAAAQGN+ W L LV +IRSRVGIHALVKELRETDIDGVPLLFHAASSRRK+CCFR YDLVF+VLGKGG++EQFEALDGLGRGILMHAARSNH++TFKDVF KCR AAES+RLHD+SN VAN GR E+ E L+GF GERP D +T+T + S++ LLREVLG VDRKGMTCLHHAAEAGSSEVL EVVK GS W D GASDRSGRTPIMLVLRNAFCCE EEHTC +TDL DKFGILFDEIP T HR + P P+PK + + R GVV +A P + + +D F C + H R + I A L + G HVLVAIE+DEF L ADD G+FRLP+ P DETPT PV + EVL M+N RNVSLFSLAILS EAV+LIFDLVVR+FG D+S RN R VRF D D GDQ D+ N+ H DTIWSILTG S+ TSSLTCAASVSMEADG GRTMF LV+++LEKQ +G +KFRELLSP + ST + +ISPLAGAVFSSNWVLFREVYDRYEKLAGCCW RETVL QIP GPPH R VL DE+LHE H+++PPLITRGAWTIPAVMWPDIVKAY+RG+P ++ Y CG +H+ L SWRDDFKHYSRRG KVAA G+F LRELV+EGFPLHDDH+ LLENIGDHE DV+DTIL AVAS+S A A +TLR
Sbjct: 2 QRMQKAMYELRRCIRDPEKDVEKGLEEVQKEVGEGLESLLDEALQSKWPEDGQNVLLYAAAQGNQTWLLGLVDLIRSRVGIHALVKELRETDIDGVPLLFHAASSRRKHCCFRIAYDLVFTVLGKGGVIEQFEALDGLGRGILMHAARSNHVDTFKDVFDKCRKAAESVRLHDQSNAVANDGRIEIPEVPLYGFRGERPSDSTTQTPEKSSNSLLLREVLGTVDRKGMTCLHHAAEAGSSEVLCEVVKECGSHWADLGASDRSGRTPIMLVLRNAFCCEGEEHTCRQTDLEDKFGILFDEIPLEPIRATGGHRYIGWMQPSRIQPQRLPAPKQTPVETRAV--TELIHAARGGVVSLELALNKALPN-SKTDSEDGFKVHLDSALAVEVCIDGSWRQSQDDHHRTV--IWGRALLLAAAARLGDVDVLYHVLVAIEDDEFFLEADDAGKFRLPERPIPVDETPTAIPVSNKLREVLGMINSRNVSLFSLAILSRRHEAVELIFDLVVRLFGEDQSSRNDQRAVRFRDGDDGDQGHQGQGQRDRGNQPHHDTIWSILTGHSHTTSSLTCAASVSMEADGNGRTMFCLVFEMLEKQFRRGVGEKKFRELLSPKSMTLKSSSTDQEHSISPLAGAVFSSNWVLFREVYDRYEKLAGCCWQRETVLKQIPQGPPHGRSVLKDEELHEYHDNIPPLITRGAWTIPAVMWPDIVKAYKRGEPDD-REGYCCCGRQHQRLLSWRDDFKHYSRRGAKVAAKRGDFTALRELVNEGFPLHDDHMPFLLENIGDHEHDVIDTILAAVASTSNPFAMAAGVSRTLR 810
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI) HSP 1 Score: 563 bits (1450), Expect = 1.180e-176 Identity = 356/790 (45.06%), Postives = 450/790 (56.96%), Query Frame = 3
Query: 132 MYHLRRCIRDPEKDVKKGLKEVKDKVGEGLESLFDEALQSKCPEDGQNVLFYAAAQGNKAWFLELVHVIRSRVGIHALVKELRETDIDGVPLLFHAASSRRKYCCFRTVYDLVFSVLGKGGIMEQFEALDGLGRGILMHAARSNHINTFKDVFRKCRNAAESIRLHDRSNPVANYGRTEVTEGTLHGFSGERPPDFSTRTTKGSADGRLLREVLGKVDRKGMTCLHHAAEAGSSEVLREVVKIGGSLWKDFGASDRSGRTPIMLVLRNAFCCEDEEH----TCGETDLADKFGILFDEIPWGRTPLHRVDATVAR*DSVPPSPKAYTL*DSGGDG---ADACCTRRRGVVRASPEQASAELQDR--F*GWF-----QGKPQQSTCGR---RVHRRQLEAIASPAPLYCNLGKGLTTGSGHVLVAIENDEFVLT--ADDEGEFRLPDAPKQTDETPTEFPVGTNVLEVLEMMNGRNVSLFSLAILSGSREAVKLIFDLVVRVFGYDRSYRNGHRVVRFVDADGGDQAXXXXXXDQCNRLHDTIWSILTGRSNATSSLTCAASVSMEADGEGRTMFGLVYDLLEKQAMQGARMRKFRELLSPVPVPFSTTMKPTISPLAGAVFSSNWVLFREVYDRYEKLAGCCWLRETVLSQIPPGPPHDRCVLDDEDLHECHEHVPPLITRGAWTIPAVMWPDIVKAYQRGQPQTPQDSYSSCGT--RHEPLPSWRDDFKHYSRRGVKVAADWGNFAGLRELVHEGFPLHDDHIRSLLENIGDHEQDVMDTILDAVASSS 2438
MYHLRR IR+PE V+KG K VKD++GE LES+ DEAL SKCPEDGQN+L YAAA GN+ WFL L+ IRS++GI ALV ELRE DIDG PLLFHAASS KY CFRT ++ SVLGKG +++QFE +DGLGRGILMHAARSNH++ FK+VF +CR A+ +R HD P G+TE + L T SAD LLREVLGK DR G CLHHAAEAGS VL EVVK+ S++++ +D GRTPIM VLRN C E+ E L KF L++ + P T S P P + D + R G+V L R G F T G + HR + A LG HVL+AI+ +F L +++ +FRL + E P G V E + +N R S+FS AILSG +A++L++DLV +FG D+ ++ DT L+G++N +SSLTCAAS SMEAD G TMF V+ LL++Q R+ R+L +P K ISPL GA FSSNW+LFR+VYD YE+ G W R+ VL+QIP GPP R VL+ +++H+C + +P LI RGAW+IPAVMW DIVKAYQR Q +P + R PLPSWRD+FK YSRR VK AA G F LR+LV EGFPLH+ HI +LLENIGDHE+D+++TIL V ++S
Sbjct: 1 MYHLRRHIRNPEMGVEKGWKLVKDELGENLESILDEALLSKCPEDGQNLLMYAAAHGNEEWFLHLIDHIRSQLGIPALVTELREIDIDGCPLLFHAASSNCKYSCFRTAKYIILSVLGKGELVQQFELVDGLGRGILMHAARSNHVDNFKEVFNRCREVADRMRPHDE--PTVG-GQTESLDPQL------------PATDTASADIGLLREVLGKADRIGKNCLHHAAEAGSYAVLHEVVKLCCSVYEEMNTADIMGRTPIMYVLRNDSCRGQEQQGSTLALKEESLRKKFHELYEALQDATCPQDTPVKTGWMEPSRVPPPSLAVPKGTRVDTRAVTELMHAARGGLVSLELALNKLPLASRNIAEGGFTVALDNALAVNMTIGNTQEQSHRTKAWGWALLLAAAAKLGD--IDVLYHVLLAIKKGKFTLVKHGENDHDFRLAKVERPAGGGWVELPRGDRVQEAVRAINTRGKSVFSYAILSGRTDAMELVYDLVRGLFG-----------------------------DKTSQTWDT----LSGKTNKSSSLTCAASASMEADNHGITMFDKVFSLLQQQTDD--RLLVQRQLSPRFAMPHRGKGKVKISPLVGAAFSSNWILFRKVYDTYEEWTGHRWWRQQVLAQIPSGPPRRRSVLELQEMHDCEDDIPALIIRGAWSIPAVMWRDIVKAYQRAQLCSPDATSRGVPQPLRINPLPSWRDEFKGYSRRAVKEAAKRGTFRSLRDLVQEGFPLHEHHIPALLENIGDHEKDIIETILATVTNAS 738
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Match: D8LH97_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI) HSP 1 Score: 330 bits (847), Expect = 4.810e-94 Identity = 287/849 (33.80%), Postives = 370/849 (43.58%), Query Frame = 3
Query: 48 LAEDEMSEIEGVREHLWAPHRAQRMQKAMYHLRRCIRDPEKDVKKGLKEVKDKVGEGLESLFDEALQSKCPEDGQNVLFYAAAQGNKAWFLELVHVIRSRVGIHALVKELRETDIDGVPLLFHAASSRRKYCCFRTVYDLVFSVLGKGGIMEQFEALDGLGRGILMHAARSNHINTFKDVFRKCRNAAESIRLHDRSNPVANYGRTEVTEGTLHGFSGERPPDFSTRTTKGSADGRLLREVLGKVDRKGMTCLHHAAEAGSSEVLREVVK----IGGSLWKDFGASDRSGRTPIMLVLRNAFCCEDEEHTCGETDLADKFGILFDEIPWGRTPLHRVDATVAR*DS------------VPPSPKAYTL*DSGGDGADACCTRRRGVVRASPEQA------SAELQDRF*GWFQGKPQQSTCGRRVHRRQLEAIASPAPLYCNLGKGLTTGSGHVLVAIENDEFVLTADDEGEF-RLPDAPKQT----DETPTEFPVGTN--VLEVLEMMNGRNVSLFSLAILSGSREAVKLIFDLVVRVFGYDRSYRNGHRVVRFVDADGGDQAXXXXXXDQCNRLHDTIWSILTGRS------NATSSLTCAASVSMEADGEGRTMFGLVYDLLEKQAMQGARMRKFRELLSPVPVPFSTTMKPTISPLAGAVFSSNWVLFREVYDRYEKLAGCCWLRETVLSQIPPGPPHDRCVLDDEDLHECHEHVPPLITRGAWTIPAVMWPDIVKAYQRGQPQTPQDSYSSCGTRHEPLPSWRDDFKHYSRRGVKVAADWGNFAGLRELVHEGFPLHDDHIRSLLENIGDHEQDVMDTILDAVASSSRK-GAAQNSYKTLRSQR 2486
+A+ M E+ + W PHRAQ + +GE LES+ D ALQSK PEDGQN+L YAAAQG AWFL + IRS++G+ AL KELRE DID PLLF+AA+SR + CFRT +DLV+ LGKGG++EQ A+DG GR +LMHAARSN+ + + ++ + ++ + P+ + G TE D KGM CLHHAAEAG SEVL +V+K GGS + D + RTP+M VL +A EE + L DKF +L+ + T D V D VP + + S G RG + S E A S+ L+D G C E P P + GKGL + I+ VLTA + +F + P+ + T + E P G V V+ M+ SLFS AILSG AVK ++ L+V++FG + H W+ILTGR S L CAAS SME GR F LVY L+ A +K R L P P P T K ISPL GA FSSNW+LF VYD Y LA WLR L + S S G E L SWR+ + YS R V VA++ G F LR+LV EGFPLHDDHI +LL +IGDHEQD+++T+L AVA++S G A + LR R
Sbjct: 20 MADAAMPEV---HQQSWTPHRAQNL----------------------------LGEDLESVLDGALQSKAPEDGQNLLTYAAAQGRDAWFLFIAGKIRSKMGVRALAKELRELDIDRAPLLFNAAASRGEKSCFRTAHDLVYKALGKGGLLEQLGAVDGEGRTMLMHAARSNNSDAYDEI----------VGIYFKVVPLTSSGYTEK-------------------------------------DHKGMNCLHHAAEAGCSEVLGKVIKKYSDAGGS---SYAERDNNNRTPVMCVLSDA---SREERA--DDSLRDKFTLLYSNMS---TTCGEQDEKVCTHDGGHAKQGWMEMTDVPTQQISRSEEISKARGVTELMHAARGGL-VSLELALNEPLPSSRLEDGSIS-LDGALNVEACDEPASD---EPRWEPQPAW---GKGLLLAAAAERGDIDVLHVVLTAIKDNKFTKEPNTDRFTLRKQESRLAELPYGDGEKVRTVVREMSKGGKSLFSEAILSGQTVAVKHVYRLIVKLFG---------------------------------KTHPETWAILTGRDFNSGKVAEASPLACAASASMEPCDHGRDTFDLVYSYLQTHAPDE---KKLRIQLVPQPPPLDLTAKTQISPLVGAAFSSNWILFWRVYDTYTTLAKKPWLRTNALRRAT-------------------------------------------------------SDKSGG---EELMSWREYLRAYSSRAVHVASERGAFTDLRDLVKEGFPLHDDHIPALLVSIGDHEQDIIETVLFAVANASNPFGMAAGVSRFLRRAR 677
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Match: A0A6H5JTH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH2_9PHAE) HSP 1 Score: 289 bits (740), Expect = 3.440e-84 Identity = 230/660 (34.85%), Postives = 305/660 (46.21%), Query Frame = 3
Query: 132 MYHLRRCIRDPEKDVKKGLKEVKDKVGEGLESLFDEALQSKCPEDGQNVLFYAAAQGNKAWFL-ELVHVIRS----------RVGIHALVKELRETDIDGVPLLFHAASSRRKYCCFRTVYDLVFSVLGKGGIMEQFEALDGLGRGILMHAARSNHINTFKDVFRKCRNAAESIRLHDRSNPVANYGRTEVTEGTLHGFSGERPPDFSTRTTKGSADGRLLREVLGKVDRKGMTCLHHAAEAGSSEVLREVVKIGGSLWKDFGASDRSGRTPIMLVLRNAFCCEDEEH----TCGETDLADKFGILFDEIPWGR----TPLHRVDATVAR*DS-VPPSPKAYTL*DSGGDGADACCTRRRGVVR---ASPEQASAELQDRF*GWFQGKPQQSTCGRRVHRRQLEAIASPAPLYCNLGKGLTTGSG------HVLVAIENDEFVLT--ADDEGEFRLPDAPKQTDETPTEFPVGTNVLEVLEMMNGRNVSLFSLAILSGSREAVKLIFDLVVRVFGYDRSYRNGHRVVRFVDADGGDQAXXXXXXDQCNRLHDTIWSILTGRSNATSSLTCAASVSMEADGEGRTMFGLVYDLLEKQAMQGARMRKFRELLSPVPVPFSTTMKPTISPLAGAVFSSNWVLFREVYDRYEKLAGCCWLRETV 2018
MYHLRR IR+PE DV+KG K VKD++GE LES+ DEAL SKC EDGQN G + + H I + ++GI L+ ELRE DI G PLLFHAASS +Y CFRT D++ SVLGKG +++QFE +DGLGRGILMHAARSNH+ FK+V CR A+ + HD+ P G+TE + L T SAD LL +VLGKVDR G CLHHAAEAGS VL EVV++ GSL+++ +D GRTPIM VLRN C + T E L K L++ +P TP+ +R + +P PK + D+ + R G+V A E A G+ + + Q E L G HVL+AI+ +F L ++++ +FRL + D E P G V + + R S+FS AILSG +A++L++DLV +FG + R+ RL + + SVSM G+G+ SPL GA FSSNW+LF++VYD YE G W R+ V
Sbjct: 1 MYHLRRHIRNPEMDVEKGWKLVKDELGEDLESILDEALLSKCSEDGQNCSCTPLPTGTRMVSAPDRPHQITAIYCLPPAQSTKLGIPTLLTELREIDIHGCPLLFHAASSNCEYSCFRTAKDMILSVLGKGELVQQFELVDGLGRGILMHAARSNHVENFKEVLNGCREVADCMLPHDK--PTVG-GQTESLDPQL------------PATDTASADAGLLLQVLGKVDRMGKNCLHHAAEAGSYAVLDEVVELCGSLYEEMNTADIMGRTPIMYVLRNDSCRGQAQQGPTLTLREQSLRKKLYELYEALPDATCTRGTPVRTGWMKPSRVPAPIPTVPKKNRV-DTRAV-TELIHAARGGLVSLELALNELPLASRNSTESGFTVALDDALAVNITIDKAQEEQFHRTKAWGWALLLAAAAKLGGIDVLYHVLLAIKKGKFNLVKRSENDRDFRLAKVERPADGGRVELPRGDRVQAAVRAIKTRAKSVFSYAILSGRTDAMELVYDLVRGLFGNYTEVQTDDRL----------------------RLQRQL----------------SPSVSMPHRGKGKVK----------------------------------------SPLVGATFSSNWILFQKVYDTYEAWTGHRWWRQNV 565
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Match: A0A6H5JNN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN7_9PHAE) HSP 1 Score: 284 bits (727), Expect = 1.190e-81 Identity = 239/674 (35.46%), Postives = 316/674 (46.88%), Query Frame = 3
Query: 114 QRMQKAMYHLRRCIRD---PEKDVKKGLKEVKDKVGEGLESLFDEALQSKCPEDGQNVLFYAAAQGNKAWFLELVHVIRSRVGIHALVKELRETDIDGVPLLFHAASSRRKYCCFRTVYDLVFSVLGKGGIMEQFEALDGLGRGILMHAARSNHINTFKDVFRKCRNAAESIRLHDRSNPVANYGRTEVTEGTLHGFSGERPPDFSTRTTKGSADGRLLREVLGKVDRKGMTCLHHAAEAGSSEVLREVVK----IGGSLWKDFGASDRSGRTPIMLVLRNAFCCEDEEHTCGETDLADKFGILFDEIPWGRTPLHRVDATVAR*DSVPPSPKAYTL*DSGGDGADACCTRRRGVVRASPEQASA----ELQDRF*GWFQG------KPQQST--------CGRRVHRRQLEAIASPAPLY---CNLGKGLTTGSGHVLVAIENDEFVLTADDEGEF-RLPDAPKQT----DETPTEFPVGTNVLEVLEMMNGRNVSLFSLAILSGSREAVKLIFDLVVRVFGYDRSYRNGHRVVRFVDADGGDQAXXXXXXDQCNRLHDTIWSILTG------RSNATSSLTCAASVSMEADGEGRTMFGLVYDLLEKQAMQGARMRKFRELLSPVPVPFSTTMKPTISPLAGAVFSSNWVLFREVYDRYEKLAGCCWLRETV 2018
QR Q+ MY LRR IR+ EK VKK E ++ +GE LES+ D ALQSK PEDGQN++ YAAAQG WFL + IRS++G+ AL KELRE DID PLLF+AA+SR + CFRT +DLV+ LGKGG++EQ EA+DG GR +LMHAARSN N F ++ + ++ ++ P+ + D++ + DRKGM CLHHAAEAG SEVL +V+K GGS + D + RTP+M VL +A + G++ L KF +L+ +P T + D V SV P A G T+R + ++ A EL G +P S+ ++ + + AS P + GKGL + I+ VLTA +G F + P+A + T + P G NV V+ M+ SLFS AILSG AV+ ++ L+V++FG W+ILTG + S L CAAS SME G MF LVY L+ A + L+ VP P K TISPL GA FSSNWVLF VYD Y LA WLR V
Sbjct: 16 QRTQETMYRLRRQIREVIGTEKVVKKTFVEEQNLLGEDLESVLDGALQSKAPEDGQNLITYAAAQGRDVWFLFIAGKIRSKIGVRALAKELRELDIDRAPLLFNAAASRGETSCFRTAHDLVYKALGKGGLIEQLEAVDGEGRTMLMHAARSNDGNAFDEI----------VGIYSKAVPLTSS-------------------DYTAK------------------DRKGMNCLHHAAEAGCSEVLGKVIKKYSDAGGS---SYAERDNNNRTPVMYVLSDAT----RDVRAGDS-LLKKFTLLYSNMP---TTCGKQDEKV----SVDPGEHAK----EGWMEMTDVLTQRIQISKSHEITRKARGVTELMHAARGGLGSLELALNEPLPSSRLADGSISLDIALNVKACDEAASDKPRWEPQPAWGKGLLLAAAAERGDIDVLHIVLTAIQDGVFTKKPNADRFTLRRHEGRRAGLPFGENVKTVVREMSKGGKSLFSQAILSGRTVAVEHVYLLIVKLFG---------------------------------ETDPETWAILTGIDLLSGKVAEASPLACAASASMEPSDHGSKMFDLVYSYLQTHAPNEEEL-----LIQLVPKPPHYEPKTTISPLVGAAFSSNWVLFWRVYDTYTTLAKKPWLRTNV 585
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Match: D7FNX3_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX3_ECTSI) HSP 1 Score: 279 bits (714), Expect = 2.500e-79 Identity = 240/799 (30.04%), Postives = 347/799 (43.43%), Query Frame = 3
Query: 90 HLWAPHRAQRMQKAMYHLRRCIRDPEKDVKKGLKEVKDKVGEGLESLFDEALQSKCPEDGQNVLFYAAAQGNKAWFLELVHVIRSRVGIHALVKELRETDIDGVPLLFHAASSRRKYCCFRTVYDLVFSVLGKGGIMEQFEALDGLGRGILMHAARSNHINTFKDVFRKCRNAAESIRLHDRSNPVANYGRTEVTEGTLHGFSGERPPDFSTRTTKGSADGRLLREVLGKVDRKGMTCLHHAAEAGSSEVLREVV----KIGGSLWKDFGASDRSGRTPIMLVLRNAFCCEDEEHTCGETDLADKFGILFDEIPWGRTPLHRVDATVAR*DSVPPSPKAYTL*DSGGDGADACCTRRRGVV---------------RASPEQASAELQDRF*GWFQGKP-QQSTCGRRVHRRQLEAIASPAPLYCNLGKGLTTGSGHVLVAIENDEFVLTADDEGEFRLPDAPKQTDETPTEFPVGTNVLEVLEMMNGRNVSLFSLAILSGSREAVKLIFDLVVRVFGYDRSYRNGHRVVRFVDADGGDQAXXXXXXDQCNRLHDTIWSILTGRSNATSSLTCAASVSMEADGEGRTMFGLVYDLLEKQAMQGARMRKFRELLSPVPVPFSTTMKPTISPLAGAVFSSNWVLFREVYDRYEKLAGCCWLRETVLSQIPPGPPHDRCVLDDEDLHECHEHVPPLITRGAWTIPAVMWPDIVKAYQRGQPQTPQDSYSSCGTRHEPLPSWRDDFKHYSRRGVKVAADWGNFAGLRELVHEGFPLHDDHIRSLLENIGDHEQDVMDTILDAV 2426
H W + A+ +AMY LR IR + V +G V+ +G+ ESL +AL + P+DGQN++ YAA G + WF+ L+ IR ++G +ALVK+LR DI+G PLLF AASSR CF+TV+D + +VLG+GG++EQ A DG+GR ++M+AAR N + F V+ H R+ A G GS G L KVD LHHAAEAG +VL EV+ +I G K D++G TP+ VLR + GE + D+ F+++ W LH + V P P + + R G+ R P+ A + + GK + T G+ +L+A L G V+ AI+ FV + R D + T+ PV +E + SLF LA+LSG EAV ++ + + R +W + G S LTCA+S SM+++ G + VY L + + +PLAGA S NWVLF+ VY+ YE L G W R+ +L +P + + + +HEC HV + RGA + AVMW D+V+AYQR + + ++ S +PSWR F S + V+ A + G F LRELV EG PLHDD I +LL+ D + +VMD ++ AV
Sbjct: 12 HAWPSYSAKWKHQAMYELRAAIRYRQ-SVAEGYARVEKNLGKISESLVHQALLASDPDDGQNLMAYAARWGREEWFIYLIQHIRDQLGFNALVKQLRARDINGAPLLFLAASSRSSENCFQTVHDALSAVLGRGGLVEQVAARDGMGRTVVMYAARGNDVEVFHRVW-------NMYHHHQRTFSAAGEG------------------------LGGSPSGALT-----KVDHTERNVLHHAAEAGCLDVLCEVLLLVRRISGDS-KTMHKPDKNGLTPLHHVLRAKY---------GEPEGRDEIRPKFEKL-W----LHSNKGSFMVPRRVMPMPCVGRTGVAVMAVTELIHAARGGLPSLKLVLAKIRLMKFWRKKPDSAVVTVNEALRVTVDGKKGDEDTPGQG----ELDAWGWGMLLAAAAKGGHVDVLETVVHAIKTGSFVEDVSE----RAADQGQATNTCQELEPVD----RAIEAILSSGSSLFGLAVLSGKVEAVLWVYQFLAQ------------------------------------RCPHQLWENVRGAQGKISPLTCASSSSMKSESHGTEILVAVYTCLRESSS---------------------------TPLAGAALSGNWVLFQRVYNMYESLTGRRWSRDELLGHLPIASQEKIILGEPQAIHECAPHVHTSLGRGAGNVTAVMWRDLVEAYQRAEGEASEEGISE-------VPSWRQTFMSLSGKAVRSATENGTFDDLRELVKEGLPLHDDLIPTLLKRAED-QGEVMDIVMYAV 675
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE) HSP 1 Score: 275 bits (702), Expect = 6.790e-74 Identity = 247/830 (29.76%), Postives = 365/830 (43.98%), Query Frame = 3
Query: 123 QKAMYHLRRCIRDPEKDVKKGLKEVKDKVGEGLESLFDEALQSKCPEDGQNVLFYAAAQGNKAWFLELVHVIRSRVGIHALVKELRETDIDGVPLLFHAASSRRKYCCFRTVYDLVFSVLGKGGIMEQFEALDGLGRGILMHAARSNHINTFKDVFRKCRNAAESIRLHDRS--NPVANYGRTEVTEGTLHGFSGERPPDFSTRTTKGSADGRLLREVLGKVDRKGMTCLHHAAEAGSSEVLREVVKIGGSLWKDFGAS----DRSGRTPIMLVLRNAFCCEDEEHTCGETDLAD------KFGILFDEIPWGRTPLHRVDATVAR*DSVPPSPKAYTL*DSGGDGADACCTRRRGVVRASPEQASAELQDRF*GWFQGKP-------QQSTCGRRVHRR------------------------QLEAIASPAPLYCNLGKGLTTGSGHVLVAIENDEFVLTADDEGEFRLPDAPKQTDETPTEFPVGTNVLEVLEMMNGRNVSLFSLAILSGSREAVKLIFDLVVRVFGYDRSYRNGHRVVRFVDADGGDQAXXXXXXDQCNRLHDTIWSILTGRSNATSSLTCAASVSMEADGEGRTMFGLVYDLLEKQAMQGARM-----RKFRELLSPVPVPFS---------TTMKPTISPLAGAVFSSNWVLFREVYDRYEKLAGCCWLRETVLSQIPPGPPHDRCVLDD-EDLHECHEHVPPLITRGAWTIPAVMWPDIVKAYQRGQPQTPQDSYSSCGTRHEPLPSWRDDFKHYSRRGVKVAADWGNFAGLRELVHEGFPLHDDHIRSLLENIGDHEQDVMDTILDAVASSS 2438
Q+AMY LR IRD + V +G V G+ ESL +AL ++ PEDGQN++ YAA G K WFL LV +R ++G+ LVK+LR DI+G PLLF A SSR CF+TVYD + + LGKGG++EQ A D LGR I+M+AAR N ++ FK ++ H R+ +PV +G P + L KVD G LHHAAEAG +V+ E++ + +L + D++G TP+ +LR + GE ++ D +F F+++ W + + V P P+ + D R G+ A L +QGKP +++ C VH +L+A L G HV+ AI+ FV D + + T T E V +E + LF A+LSG EAV ++ + + R +W + G + ++LTCA+S SM+ + +G + VY L++ A + +EL +P TT++ + +PLAGA S NWVLF+++Y+ YE+L W RE +L +P D+ +L + +HEC HV RG + AV+W D+V+AYQR + + S +PSWRD FK SR+ V +AA+ G F LRELV G PLHDD I +LL + D E++VMD ++ AV ++S
Sbjct: 7 QQAMYELRAAIRDRQ-SVAEGYARVDKIPGKISESLMHQALLARDPEDGQNLMAYAARWGRKRWFLYLVQHVRDKLGVGCLVKQLRAWDINGTPLLFLAISSRSSENCFKTVYDELVTALGKGGLVEQIAASDDLGRNIVMYAARGNSVDVFKRAWKM-------YHYHQRTFASPVEGWGGA---------------PSIT----------------LPKVDYTGRNLLHHAAEAGCLDVIHEILLMVRNLSDSTNVTMHKPDKNGLTPLHHLLRAKY---------GEPEVPDDIEDPAEFPQKFEKL-W----FYGSKGSFMARRKVMPLPRDGRAAVAVSAITDVIHAARGGLPSLQLILAKICLTK----CWQGKPNNTVVTIEEALCVA-VHETMEGEDEXXXXXXXXXXXXXXXXXXELDAWGWGMLLTAAAKGGHVDVLEHVVHAIKTGSFVEGLSDRNADQ-----RHTVYTNEELQ---RVDRAVEAIVSSGSYLFGQAVLSGKAEAVLWVYQFLAQ------------------------------------RYPKELWKNVRGAQDKINALTCASSSSMKCERQGVEVLVAVYSCLQEAAKYEFGTPEDVTKNLKELFLSRSLPMKPTGSKSSARTTVESSSTPLAGAALSGNWVLFQKIYEMYERLTDQRWSREELLRHLPIAS-QDKIMLGQCQAMHECDPHVHTSFGRGVGNVTAVIWRDLVEAYQRAEVKCAVIELSEMSD----IPSWRDTFKSLSRKAVGLAAERGAFDDLRELVKAGLPLHDDLIPTLLTSAED-EEEVMDIVMYAVGNAS 728
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Match: D7FX79_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI) HSP 1 Score: 253 bits (647), Expect = 5.350e-67 Identity = 241/830 (29.04%), Postives = 353/830 (42.53%), Query Frame = 3
Query: 132 MYHLRRCIRDPEKDVKKGLKEVKDKVGEGLESLFDEALQSKCPEDGQNVLFYAAAQGNKAWFLELVHVIRSRVGIHALVKELRETDIDGVPLLFHAASSRRKYCCFRTVYDLVFSVLGKGGIMEQFEALDGLGRGILMHAARSNHINTFKDVFRKCRNAAESIRLHDR--SNPVANYGRTEVTEGTLHGFSGERPPDFSTRTTKGSADGRLLREVLGKVDRKGMTCLHHAAEAGSSEVLREVV----KIGGSLWKDFGASDRSGRTPIMLVLRNAFCCEDEEHTCGETDLADKFGILFDEIPWGRTPLHRVDATVAR*DSVPPSPKAYTL*DSGGDG-ADACCTRRRGVVRAS----PEQASAELQDRF*GWFQGKP-------QQSTCGRRVHRR------------------------QLEAIASPAPLYCNLGKGLTTGSGHVLVAIENDEFVLTADDEGEFRLPDAPKQTDETPTEFPVGTNVLEVLEMMNGRNVSLFSLAILSGSREAVKLIFDLVVRVFGYDRSYRNGHRVVRFVDADGGDQAXXXXXXDQCNRLHDTIWSILTGRSNATSSLTCAASVSMEADGEGRTMFGLVYDLLEKQA----------------------MQGARM---------RKFREL-------LSPVPVPFS--TTMKPTISPLAGAVFSSNWVLFREVYDRYEKLAGCCWLRETVLSQIPPGPPHDRCVLDD-EDLHECHEHVPPLITRGAWTIPAVMWPDIVKAYQRGQPQTPQDSYSSCGTRHEPLPSWRDDFKHYSRRGVKVAADWGNFAGLRELVHEGFPLHDDHIRSLL 2372
MY LR IRD + V +G V G+ ESL +AL ++ PEDGQN++ YAA G + WFL LV +R ++G+ LVK+LR DI+G PLLF A SSR CF+ V+D + + LGKGG++EQ A D LGR I+M+AAR N ++ FK ++ H R S+PV +G P + L KVD G LHHAAEAG +VL E++ K+ S D++G TP+ +LR + E G+ + +F F+++ W L+ + V P+ DG AD + V+ A+ P + ++QGKP +++ C VH +L+A L G HV+ AI+ FV D +L T T E V +E + LF A+LSG E V ++ + + R +W + G + ++LTCA+S SM+ + +G + VY L++ A + A+ R ++L + P S TT+K + +PLAGA S NWVLF+ +Y+ YE+L W RE +L +P D+ +L + +HEC HV RG + AV+W D+V+AYQR + + + S +PSWRD FK SR+ V++AA+ G F LRELV G PLHDD I +LL
Sbjct: 1 MYELRAAIRDRQ-SVAEGYARVDKIPGKISESLMHQALLARDPEDGQNLMAYAARWGREEWFLYLVQHVRDKLGVGCLVKQLRAWDINGTPLLFLAISSRSSENCFKAVFDELVTALGKGGLVEQIAASDDLGRNIVMYAARGNSVDVFKRAWKM-------YHYHQRTFSSPVEGWGGA---------------PSIT----------------LTKVDYTGRNLLHHAAEAGCLDVLNEILLMVRKLSDSANGTMHKPDKNGLTPLHHLLRAKY---GEPEVPGDIEDPAEFPQKFEKL-W----LYGSKGSFMARRKVMALPR---------DGRADVAVSAITDVIHAARGGLPSLQLILAKICLTKFWQGKPNNTVVTIEEALCVA-VHETMEGEDEXXXXXXXXXXXXXXXXXXELDAWGWGMLLAAAAKGGHVDVLEHVVHAIKTGSFVEGLSDRNADQL-----HTVYTNQELQ---RVDRAVEAIVSSGSYLFGQAVLSGKVEVVLWVYQFLAQ------------------------------------RYPQELWKNVRGAQDKINALTCASSASMKCERQGVEVLVAVYSCLQEVAEKYLICVTSGHIKRVHQVRDSRREAAKCEFKTHEDITRNLKDLFVSRSHTMQPAGSKSSARTTVKSSSTPLAGAALSGNWVLFQRIYEMYERLTDQRWSREELLRHLPIAS-QDKIMLGQCQAMHECGRHVHTSFGRGVGNVTAVIWRDLVEAYQRAEVTSAEIEGSEEVI--SDIPSWRDTFKSLSRKAVRLAAERGAFDDLRELVKAGLPLHDDLIPTLL 726 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig875.20223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig875.20223.1 >prot_Ecto-sp13_S_contig875.20223.1 ID=prot_Ecto-sp13_S_contig875.20223.1|Name=mRNA_Ecto-sp13_S_contig875.20223.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=340bp MMNGRNVSLFSLAILSGSREAVKLIFDLVVRVFGYDRSYRNGHRVVRFVDback to top mRNA from alignment at Ecto-sp13_S_contig875:9881..19916- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig875.20223.1 ID=mRNA_Ecto-sp13_S_contig875.20223.1|Name=mRNA_Ecto-sp13_S_contig875.20223.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10036bp|location=Sequence derived from alignment at Ecto-sp13_S_contig875:9881..19916- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig875:9881..19916- >mRNA_Ecto-sp13_S_contig875.20223.1 ID=mRNA_Ecto-sp13_S_contig875.20223.1|Name=mRNA_Ecto-sp13_S_contig875.20223.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1020bp|location=Sequence derived from alignment at Ecto-sp13_S_contig875:9881..19916- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |