prot_Ecto-sp13_S_contig8747.20220.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8747.20220.1
Unique Nameprot_Ecto-sp13_S_contig8747.20220.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length366
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8747.20220.1 vs. uniprot
Match: D7FWR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR4_ECTSI)

HSP 1 Score: 462 bits (1189), Expect = 1.360e-153
Identity = 310/371 (83.56%), Postives = 317/371 (85.44%), Query Frame = 0 
Query:    1 VTQHCAERGRLLDRIWRSLNELFEFVLWEMSRTVTRCEERLEVMNAVVEQERADRESRETMHKNELQLTEELINGRKDNHTWSKKVRQLKDQEVRYDRIVAENERTVATLKQWLPNFETYGDSVLAKVLPPRPLPPPTQQQAAVVSAPPLSPQEALERDLNRIHAAGLWRVRRDXXXXXXXSISDSSMVXXXXXXXXXXXXXXXXXXSIAGSGDLSNRGGRGTSPMTVRTTVIGRSGTAQSGGXXXXXSQSPKGISTAIAXXXXXXXXXXXXXXXXXXXXXXXXAGAV----SKTGVVSKRSLADSKMMDVLVQQGREAALRAEALRNETKEAEERAAKAKADAREHARDLLQ-ACGKAEGVILSLLADPA 366
            VTQHCAERGRLLDRIWRSLNELFEFVLWEMSRTV RCEERLEVMNAVVEQERADRESRET+HKNELQLTEELINGR     WSKKVRQLKDQEVRY  IVAENERTVATLKQWLPNFETYGDSVLAKVLPP PL PPTQQQAAVVSAPPLSPQEALERDLNRIHAAGLW VRRDXXXXXXXSISDSSMV                    AGSGDLSNRGGRGTSPMTVRT V GRSGTA+SG XXXXX      +STAIA XXXXXXXXXXXXXXXXXXXXXXX        S+TGV  KRSLAD KMMDVLVQQGREAALRAEALRNETKEAEERA+K KADA+EHARDLLQ ACG+AEGVILSLLADPA
Sbjct:  163 VTQHCAERGRLLDRIWRSLNELFEFVLWEMSRTVARCEERLEVMNAVVEQERADRESRETIHKNELQLTEELINGR-----WSKKVRQLKDQEVRYGSIVAENERTVATLKQWLPNFETYGDSVLAKVLPPLPLSPPTQQQAAVVSAPPLSPQEALERDLNRIHAAGLWCVRRDXXXXXXXSISDSSMVERSSNSDRS-----------AGSGDLSNRGGRGTSPMTVRTPVNGRSGTAESGXXXXXXXXXXXRMSTAIATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTGVAGKRSLADRKMMDVLVQQGREAALRAEALRNETKEAEERASKVKADAKEHARDLLQQACGRAEGVILSLLADPA 517
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BLAST of mRNA_Ecto-sp13_S_contig8747.20220.1 vs. uniprot
Match: A0A835Z723_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z723_9STRA)

HSP 1 Score: 114 bits (284), Expect = 7.400e-24
Identity = 69/168 (41.07%), Postives = 99/168 (58.93%), Query Frame = 0 
Query:    1 VTQHCAERGRLLDRIWRSLNELFEFVLWEMSRTVTRCEERLEVMNAVVEQERADRESRETMHKNELQLTEELINGRKDNHTWSKKVRQLKDQEVRYDRIVAENERTVATLKQWLPNFETYGDSVLAKVLPPRPLPPPTQQQAAVVSAPPLSPQEALERDLNRIHAAGL 168
            VT HCAERGRLLD+IWRSLN+LFE+VL EMS  +   + RL  ++  +E ERA+R +R+  H ++L+ T+E ++     H WS+ VR LK     +     +NE     +K+WLP+F+ Y +SVL ++L       P     A    P +S + AL  DL R+  AGL
Sbjct:  293 VTFHCAERGRLLDKIWRSLNDLFEYVLREMSTALADSDGRLTDLSEALEAERAERRARDAQHAHDLRTTKEELS-----HKWSRVVRDLKGAAAGHAARAKQNEALTELVKRWLPSFDVYKESVLVRLLER-----PEGAPQAARRNPHVSAEHALAADLQRLKDAGL 450
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8747.20220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWR4_ECTSI1.360e-15383.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z723_9STRA7.400e-2441.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 312..346

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8747contigEcto-sp13_S_contig8747:667..5141 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8747.20220.1mRNA_Ecto-sp13_S_contig8747.20220.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8747 667..5142 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8747.20220.1 ID=prot_Ecto-sp13_S_contig8747.20220.1|Name=mRNA_Ecto-sp13_S_contig8747.20220.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=366bp
VTQHCAERGRLLDRIWRSLNELFEFVLWEMSRTVTRCEERLEVMNAVVEQ
ERADRESRETMHKNELQLTEELINGRKDNHTWSKKVRQLKDQEVRYDRIV
AENERTVATLKQWLPNFETYGDSVLAKVLPPRPLPPPTQQQAAVVSAPPL
SPQEALERDLNRIHAAGLWRVRRDDDDDGGGSISDSSMVGGGSVSDSSVI
ERSSSSDSIAGSGDLSNRGGRGTSPMTVRTTVIGRSGTAQSGGGGGGGSQ
SPKGISTAIATAKRTAGKSSSRRSASPTAATTAAAGAVSKTGVVSKRSLA
DSKMMDVLVQQGREAALRAEALRNETKEAEERAAKAKADAREHARDLLQA
CGKAEGVILSLLADPA
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