prot_Ecto-sp13_S_contig1243.2021.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1243.2021.1
Unique Nameprot_Ecto-sp13_S_contig1243.2021.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length133
Homology
BLAST of mRNA_Ecto-sp13_S_contig1243.2021.1 vs. uniprot
Match: D8LHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH6_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 4.870e-59
Identity = 99/103 (96.12%), Postives = 102/103 (99.03%), Query Frame = 0
Query:    1 MVAPKSPTNSLLLTNQQTGTVQPGESVQVSFSFHATSVGRWTHDLAVRNLGNKHDQAKVTVSATVKPRMYLHFPDLDPNAKGKPEKLQIGFCYMPGLVSTGGG 103
            +VA KSPTNSLLLTNQQTGTVQPGESV+VSFSFHATS+GRWTHDLAVRNLGNKHDQAKVTVSATVKPRMYLHFPDLDPNAKGKPEKLQIGFCYMPGLVSTGGG
Sbjct: 2437 VVASKSPTNSLLLTNQQTGTVQPGESVEVSFSFHATSIGRWTHDLAVRNLGNKHDQAKVTVSATVKPRMYLHFPDLDPNAKGKPEKLQIGFCYMPGLVSTGGG 2539          
BLAST of mRNA_Ecto-sp13_S_contig1243.2021.1 vs. uniprot
Match: A0A6H5KWQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ8_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 2.320e-44
Identity = 83/93 (89.25%), Postives = 83/93 (89.25%), Query Frame = 0
Query:   10 SLLLTNQQTGTVQPGESVQVSFSFHATSVGRWTHDLAVRNLGNKHDQAKVTVSATVKPRMYLHFPDLDPNAKGKPEKLQIGFCYMPGLVSTGG 102
            SLLLTNQQTGTVQPGESVQVSFSFHATSVGRWTHDLA          AKVTVSATVKPRMYLHFPDLDPNAKGKPEKLQIGFCYMPGLVSTGG
Sbjct:  709 SLLLTNQQTGTVQPGESVQVSFSFHATSVGRWTHDLA----------AKVTVSATVKPRMYLHFPDLDPNAKGKPEKLQIGFCYMPGLVSTGG 791          
BLAST of mRNA_Ecto-sp13_S_contig1243.2021.1 vs. uniprot
Match: A0A835YYQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ9_9STRA)

HSP 1 Score: 118 bits (296), Expect = 2.470e-28
Identity = 58/100 (58.00%), Postives = 69/100 (69.00%), Query Frame = 0
Query:    1 MVAPKSPTNSLLLTNQQTGTVQPGESVQVSFSFHATSVGRWTHDLAVRNLGNKHDQAKVTVSATVKPRMYLHFPDLDPNAKGKPEKLQIGFCYMPGLVST 100
            M+  K   N+L +T  QTGT+ P  S  V  S  A  VGRW HD+ VRNL NKHDQA VTV+ATVKP MYLHFPDLDP A GK +++QIG CY+P +  T
Sbjct:  508 MLVAKPAGNTLTVTEHQTGTLPPKGSQDVRLSLRAAVVGRWMHDIVVRNLANKHDQATVTVTATVKPAMYLHFPDLDPAALGKLQEIQIGNCYLPPVEPT 607          
BLAST of mRNA_Ecto-sp13_S_contig1243.2021.1 vs. uniprot
Match: G4YG66_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YG66_PHYSP)

HSP 1 Score: 55.1 bits (131), Expect = 4.090e-6
Identity = 28/84 (33.33%), Postives = 47/84 (55.95%), Query Frame = 0
Query:   12 LLTNQQTGTVQPGESVQVSFSFHATSVGRWTHDLAVRNL-GNKHDQAKVTVSATVKPRMYLHFPDLDPNAKGKPEKLQIGFCYM 94
            ++    TGTV  G  V  +F +  +  G+    + +RNL G++ D + +T+S  V   +Y+  P+LDP A G+ E L +G CY+
Sbjct: 1750 IIFENATGTVAAGSLVTAAFVYRGSIPGQHNEQIVLRNLSGDRLDTSVLTLSVRVTRPVYVRIPELDPQATGQLEVLDLGPCYV 1833          
BLAST of mRNA_Ecto-sp13_S_contig1243.2021.1 vs. uniprot
Match: A0A225WZ12_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZ12_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.410e-5
Identity = 28/84 (33.33%), Postives = 48/84 (57.14%), Query Frame = 0
Query:   12 LLTNQQTGTVQPGESVQVSFSFHATSVGRWTHDLAVRNL-GNKHDQAKVTVSATVKPRMYLHFPDLDPNAKGKPEKLQIGFCYM 94
            ++    TGTVQ G  V  +F +  +  G+    + +RNL G++ D + +T+S  +   +Y+  P+LDP A G+ E L +G CY+
Sbjct: 1750 MIFENATGTVQAGSFVIAAFVYKGSVPGQHNELIVLRNLSGDRLDTSVLTLSIRITRPVYVRIPELDPQATGQLEILNLGPCYV 1833          
BLAST of mRNA_Ecto-sp13_S_contig1243.2021.1 vs. uniprot
Match: A0A6G0KZ72_9STRA (Uncharacterized protein n=7 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0KZ72_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 3.520e-5
Identity = 28/84 (33.33%), Postives = 45/84 (53.57%), Query Frame = 0
Query:   12 LLTNQQTGTVQPGESVQVSFSFHATSVGRWTHDLAVRNL-GNKHDQAKVTVSATVKPRMYLHFPDLDPNAKGKPEKLQIGFCYM 94
            ++    TGTV  G  V  +F +     G+    + +RNL G++ D + +T S  V   +Y+  P+LDP A G+ E L +G CY+
Sbjct: 1909 IIFENATGTVGAGSFVIAAFVYRGNIPGQHNEQVVLRNLSGDRLDTSVLTFSVRVTRPVYVRIPELDPQATGQLEVLDLGPCYV 1992          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1243.2021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LHH6_ECTSI4.870e-5996.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWQ8_9PHAE2.320e-4489.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YYQ9_9STRA2.470e-2858.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
G4YG66_PHYSP4.090e-633.33Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A225WZ12_9STRA1.410e-533.33Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A6G0KZ72_9STRA3.520e-533.33Uncharacterized protein n=7 Tax=Phytophthora fraga... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 2..67
e-value: 1.6E-5
score: 27.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1243contigEcto-sp13_S_contig1243:9335..10262 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1243.2021.1mRNA_Ecto-sp13_S_contig1243.2021.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1243 9323..10405 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1243.2021.1 ID=prot_Ecto-sp13_S_contig1243.2021.1|Name=mRNA_Ecto-sp13_S_contig1243.2021.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=133bp
MVAPKSPTNSLLLTNQQTGTVQPGESVQVSFSFHATSVGRWTHDLAVRNL
GNKHDQAKVTVSATVKPRMYLHFPDLDPNAKGKPEKLQIGFCYMPGLVST
GGGGRPRVGDRPAPSSAQRERPRAVPYVHAQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold