mRNA_Ecto-sp13_S_contig1243.2020.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1243.2020.1 vs. uniprot
Match: D8LHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH6_ECTSI) HSP 1 Score: 2306 bits (5975), Expect = 0.000e+0 Identity = 1452/1672 (86.84%), Postives = 1474/1672 (88.16%), Query Frame = 2
Query: 3170 EADRESEIVRPLRVRNVSDRALYLTCTPNLRKQCFVYSEIPSAETSSSSSFLLSESQVPKEGSGQVSPXXXXXXXXXXXXXXXXXXXXXXXXSDWLSAVPNRPQVADLPLLPQSETTLYVGLRPVLPPEAYTAGDCRELVGGVRILGHSRTLAEAAGDGEKETRAGSGRSENNEGHLAPVGPSSXXXXXXXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXRPLSSPTXXXXXXXXXXXXARPAADRLFELTIKFVGTVGVSILRLRRQGSEAFSLLAPSSGGDGLGGSGQEAVMMAGNGSAALGNVAAAAPGRGTTGDSSAGKRVVYGSLELENVTKALPLVYRFARGGDDARHGDDIVLCDDVEGKETEGGTAAVASR-YEERIAARLRRLPAGSAELVVLAAGAGTLPPATKKSVRFGVLLNGFQGVFQRDITVENISSGSLDQANPAKTDRVSHSVRLFVDDGGVVVRSXXXXXXXXXXXXXXXXXXXXXVAKRRLSQGPSTIFEPLAETQAAVVANCGGHGSSSSPEAAGNLTDESGRALPSLETLLLPYAVAVAPCRVEAATAVVAYGESFSSSPGYSGDEYGRQRGPLLPPEDVSRFRILPLVVPRKDAAGGXXXXXXXXXLDDLGEMHEIEEYPEEKEPTGRRREEPGELVFRLTNARDRAVVLAPYSNLPVCVSTSVVETENVGGVTDEXXXXXXXXXXX--TAGVFVFDSSPAKGYERDXXXXXXXXXXXXXXXXFRTLDSVAGGCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEETPRGPSLTRCGPAASLPARATAVVRLCIRTGELTAPLPTAAVESGKAVGFDGIVAFARIGGDHASSVAAANGTAAAARAELYEQQFGGRRATVPEDTRALLLPERVYCSGSGATTDGEEDDPSPEVRAPPLVKLLRAVGTFCRPRFEVVGTPKVDLGNVGHTKSRRGRRRFEVRLRSLCDTAVPVGMVGISPELEVVTDAHGGXXXXXDGHSRG-VYKALVPRRSAVLRRNSSTASFSDAMSTRADGSCVFLGXXXXXXXXXXXXXXXXXXSTMRERGRAATAVDGGCTDTLWVPARGEATLVVQLRLSRRRQSWAGSQTFRISLVNLADPHAEEIAVDVSARVVTQLVSIIGLDEPPPSPISLRIYSPGTPTPSHLGPSAIRRRARSSSIEAFGSFGASEGGSLRLAPLAIPPLRGAAGRCAGSFQLKNVSGETVSVTLGVTPAPEVAGVLSLGASMQQDSSTGVYASVGADGRSSPAVALLPGDVLDVQAECLALPGARLPPELIPPPEPNLAEEGGGTEATMFGAPGTADWGQHLRLMGSVRVEIALEDRAGDPDQLDLDDVVPGAGGDGDGGS-------GQEEGVLVESVALVGSLVPGPTFGLSHTSVNVELRPPDSGGXXXXXDGEVTYPYDPEGPATFFLESFSQSLRPVNLKLEGGGRLFLARGVRVPAAEDGXXXXXXPARVARAVTAIAEPSSLIVSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEDRCDLFVSITDADNPGYPPQVVSVHVEVPADVVDLESEDMGGIILPGMAGPVVEDALVGGERASRGSYGLSNGGEGADALGRMSPDESRKSARARTLPCTSTAAVLECFRPTWLSKTSLILP 8152
EADRESEIVRPLRVRNVSDRALYLTCTPNLRKQCFVYSEIPSAETS XXXXXXXXXXXXXXXXXXXXXXXXSDWLSAVPNRPQVADLPLLPQSETTLYVGLRPVLPPEAYTAGDCRELVGGVRILGHSRTLAEAAGDGE+E+RAGSGRSENNEGHLAPVGPSS E RPLSSPT XXXXXX ARPAADRLFELTIKFVGT+GVSILRLRRQGSEAFSLLAP SGG GLGGSGQE VMMA NGSAALG+VAAAAPGRGTTG+SSAGKRVVYGSLELENVTKALPLVYRFARGGD+A GD IVLCDDV+GK TEGGTAA A+ +EERIAARLRRLPAGSAELVVLAAG GTLPPATKK VRFGVLLNGFQGVFQRDITVENISSGSLD AN AKTDRVSH VRLFVDDGGVVV + VAKRRLSQGPSTIFEPLAE QAAVVANCGGHGSSSSPEAAG+LTDESGRALPSLETLLLPYAVAVAPCR EAATAVVAYGESFSSSPGYSGDEYGRQRGPLLPPE+VSRFRILPLVVPRKDA GGXXXXXX LDDLGEMHEIEEYPEEKEPTGRRRE+ G+LVFRLTNARDRAVVLAPYSNLPVCVSTSVVETEN GGVT E TAGVFVFDSSPAK + XXXXXXXXXXXXXXXX RTLDSVAGGCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GEETPRGPSLTRCGPA SLPARATAVVRLCIRTGELTAPLPTAAVESGKAV FDGIVAFARIGG ASSVA N TAAAARA LYEQQFGGRRA VP DTRAL LPERVYC GSGATTDGEEDDPSPEVRAPPLVKLLRAVGTFCRPRFEVVGTP VDLGNVGHTKSRRGRRRFEVRLRSLCDTAVPVGMVGISPELEVVTDAHGGXXXXX GHSRG VYKALVPRRSA LRRNSSTASFSDAMS RADGSCVFLGXXXXXXXXXXXXXXXXXX RERGRAA AVDGGCTD LWVPARGEATLVVQLRLSRRRQSWAGSQTFRISLVNLADPHAEEIAVDVSARVVTQLVSIIGLDEPPPSPISLRIYSPGTPTPSHLGPSAIRRRARSSSIEAFGSFGASEGGSLRLAPLAIPPLRGAAGRCAGSFQLKNVSGETVSV LGV PAPEVAGVLSLGASMQQDSS GVYASVGADGRSSPAVALLPGDVLDVQAECLALPGARLPPELIPPPEPNLAEEGGGTEA MFG P T+DWGQH+RL+G+VRVEIALEDRAGDPDQLDLDDV PGAG GQEEGVLVESVALVGSLVPGPTFGLSHTSV VELRPPDSGGXXXXXDG+V YPYDPEGPATFFLESFSQSLRPV LKLEGGGRLFLARGVRVPAAEDGXXXXXX ARVARAVTAIAEPSSL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEDRCDLFV ITDAD+PGYPPQVVSV VEVPADVVDLESEDMGGIILPGMAGPVVEDAL GGERASRGSYGLSNGGEGADALGRMS DESRKSARARTLPCT TAAVLECF PTWLS+TSLILP
Sbjct: 2577 EADRESEIVRPLRVRNVSDRALYLTCTPNLRKQCFVYSEIPSAETS-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDWLSAVPNRPQVADLPLLPQSETTLYVGLRPVLPPEAYTAGDCRELVGGVRILGHSRTLAEAAGDGERESRAGSGRSENNEGHLAPVGPSSSSSCSPSQMSPAGAGDGSPAAVGAESAGGTVVAAAAAA-RPLSSPTAGLXXXXXXS--ARPAADRLFELTIKFVGTIGVSILRLRRQGSEAFSLLAPRSGGGGLGGSGQEVVMMARNGSAALGSVAAAAPGRGTTGESSAGKRVVYGSLELENVTKALPLVYRFARGGDNAGPGDGIVLCDDVDGKGTEGGTAAAAATTHEERIAARLRRLPAGSAELVVLAAGTGTLPPATKKGVRFGVLLNGFQGVFQRDITVENISSGSLDGANRAKTDRVSHPVRLFVDDGGVVVSTNSPPSLEAPEEVIAPPPS---VAKRRLSQGPSTIFEPLAEMQAAVVANCGGHGSSSSPEAAGHLTDESGRALPSLETLLLPYAVAVAPCRAEAATAVVAYGESFSSSPGYSGDEYGRQRGPLLPPEEVSRFRILPLVVPRKDAGGGXXXXXX---LDDLGEMHEIEEYPEEKEPTGRRREQAGDLVFRLTNARDRAVVLAPYSNLPVCVSTSVVETENAGGVTGEVEEEAEEDEHDDATAGVFVFDSSPAK--DXXXXXXXXXXXXXXXXXXXRTLDSVAGGCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------GEETPRGPSLTRCGPAVSLPARATAVVRLCIRTGELTAPLPTAAVESGKAVDFDGIVAFARIGGACASSVAVGNATAAAARAGLYEQQFGGRRAAVPGDTRALFLPERVYCCGSGATTDGEEDDPSPEVRAPPLVKLLRAVGTFCRPRFEVVGTPNVDLGNVGHTKSRRGRRRFEVRLRSLCDTAVPVGMVGISPELEVVTDAHGGXXXXX-GHSRGGVYKALVPRRSAALRRNSSTASFSDAMSARADGSCVFLGXXXXXXXXXXXXXXXXXXXXXRERGRAAAAVDGGCTDMLWVPARGEATLVVQLRLSRRRQSWAGSQTFRISLVNLADPHAEEIAVDVSARVVTQLVSIIGLDEPPPSPISLRIYSPGTPTPSHLGPSAIRRRARSSSIEAFGSFGASEGGSLRLAPLAIPPLRGAAGRCAGSFQLKNVSGETVSVMLGVMPAPEVAGVLSLGASMQQDSSAGVYASVGADGRSSPAVALLPGDVLDVQAECLALPGARLPPELIPPPEPNLAEEGGGTEAAMFGVPATSDWGQHMRLVGTVRVEIALEDRAGDPDQLDLDDVAPGAGXXXXXXXXXXXXXXGQEEGVLVESVALVGSLVPGPTFGLSHTSVTVELRPPDSGGXXXXXDGDVKYPYDPEGPATFFLESFSQSLRPVRLKLEGGGRLFLARGVRVPAAEDGXXXXXXXARVARAVTAIAEPSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEDRCDLFVRITDADHPGYPPQVVSVQVEVPADVVDLESEDMGGIILPGMAGPVVEDALAGGERASRGSYGLSNGGEGADALGRMSSDESRKSARARTLPCTLTAAVLECFLPTWLSRTSLILP 4221
BLAST of mRNA_Ecto-sp13_S_contig1243.2020.1 vs. uniprot
Match: A0A6H5KWQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ8_9PHAE) HSP 1 Score: 2222 bits (5759), Expect = 0.000e+0 Identity = 1399/1635 (85.57%), Postives = 1428/1635 (87.34%), Query Frame = 2
Query: 3173 ADRESEIVRPLRVRNVSDRALYLTCTPNLRKQCFVYSEIPSAETSSSSSFLLSESQVPKEGSGQVSPXXXXXXXXXXXXXXXXXXXXXXXXSDWLSAVPNRPQVADLPLLPQSETTLYVGLRPVLPPEAYTAGDCRELVGGVRILGHSRTLAEAAGDGEKETRAGSGRSENNEGHLAPVGPSSXXXXXXXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXRPLSSPTXXXXXXXXXXXX-ARPAADRLFELTIKFVGTVGVSILRLRRQGSEAFSLLAPSSGGDGLGGSGQEAVMMAGNGSAALGNVAAAAPGRGTTGDSSAGKRVVYGSLELENVTKALPLVYRFARGGDDARHGDDIVLCDDVEGKETEGGTAAVASRYEERIAARLRRLPAGSAELVVLAAGAGTLPPATKKSVRFGVLLNGFQGVFQRDITVENISSGSLDQANPAKTDRVSHSVRLFVDDGGVVVRSXXXXXXXXXXXXXXXXXXXXXVAKRRLSQGPSTIFEPLAETQAAVVANCGGHGSSSSPEAAGNLTDESGRALPSLETLLLPYAVAVAPCRVEAATAVVAYGESFSSSPGYSGDEYGRQRGPLLPPEDVSRFRILPLVVPRKDAAGGXXXXXXXXXLDDLGEMHEIEEYPEEKEPTGRRREEPGELVFRLTNARDRAVVLAPYSNLPVCVSTSVVETENVGGVTDEXXXXXXXXXXXTAGVFVFDSSPAKGYERDXXXXXXXXXXXXXXXXFRTLDSVAGGCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEETPRGPSLTRCGPAASLPARATAVVRLCIRTGELTAPLPTAAVESGKAVGFDGIVAFARIGGDHASSVAAANGTAAAARAELYEQQFGGRRATVPEDTRALLLPERVYCSGSGATTDGEEDDPSPEVRAPPLVKLLRAVGTFCRPRFEVVGTPKVDLGNVGHTKSRRGRRRFEVRLRSLCDTAVPVGMVGISPELEVVTDAHGGXXXXXDGHSRG-VYKALVPRRSAVLRRNSSTASFSDAMSTRADGSCVFLGXXXXXXXXXXXXXXXXXXSTMRERGRAATAVDGGCTDTLWVPARGEATLVVQLRLSRRRQSWAGSQTFRISLVNLADPHAEEIAVDVSARVVTQLVSIIGLDEPPPSPISLRIYSPGTPTPSHLGPSAIRRRARSSSIEAFGSFGASEGGSLRLAPLAIPPLRGAAGRCAGSFQLKNVSGETVSVTLGVTPAPEVAGVLSLGASMQQDSSTGVYASVGADGRSSPAVALLPGDVLDVQAECLALPGARLPPELIPPPEPNLAEEGGGTEATMFGAPGTADWGQHLRLMGSVRVEIALEDRAGDPDQLDLDDVVPGAGGDGDGGSGQEEGVLVESVALVGSLVPGPTFGLSHTSVNVELRPPDSGGXXXXXDGEVTYPYDPEGPATFFLESFSQSLRPVNLKLEGGGRLFLARGVRVPAAEDGXXXXXXPARVARAVTAIAEPSSLIVSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEDRCDLFVSITDADNPGYPPQVVSVHVEVPADVVDLESEDMGGIILPGMAGPVVEDALVGGERASRGSYGLSNGGEGADALGRMSPDESRKSARAR 8071
ADRESEIVRPLRVRNVSDRALYLTCTPNL+KQCFVYSEIPSAETSSSSS LLSESQ PKEGSGQV PXXXXXXXXXXXXXXXXXXXX S+WLS VPNRPQVADLPLLPQSETTLY+GLRPVLPPEAYTAGDCRELVGGVRILGHSRTLAEA GDGE+E+RAGS RSENNEGHLAPVGPSSXXXXXXXXXXXXXXXXX RPLSSPT XXXXXXXXXX ARPAADRLFELTIKFVGTVGVSILRLRRQ SEAFSLLAPSSGGDGLGGSGQE VMMAG+GSAALGNVAAAAPGRGTTGDSSAGKRVVYGSLELENVTKALPL+YRF+RGGD+ R GDDI+LCDDVEGKE EGGTAA ASRYEERIAARLRRLPAGS ELVVLAAG G L PATKKSVRFGVLLNGFQGVFQRDITVENISS +LD ANPA TD V+H VRLFVDDGGV+V + +AK RLSQGPSTIFEPLA NCGGHGSSSS EAAG+LTDE GRALP L+TLLLPYAVAVAPCR EAATAV AYGESFSSSPGYSGDEYGRQRGPLLPPE+ SRFRILPLVVPRKDA GGXXXXXXX LDDLGEMHEIEEYPEEKEP GRRR EPGE+VFRLTNARDRAVVLAPYSNLPVC+ TSVVETE GGVTD XXXXXXXXXXX XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEETPRGPSLTRCGPA SLPARATAVVRLCIRTGELTAPLPTAAVE+GKAVGFDGIVAFARIGGD ASSV AANGT+AAARA LYEQQFG RRA VP DTRALLLPERVYCSGSGATT GEED+PSPEVRAPPLVKLLRAVGTFCRPRFEVVGTP VDLGNVGHTKSRRGRRRFEVRLRSLCDTAVPVGMVGISPELEVVTDAHGG D HS+G VYKALVPRRSA LRRNSSTASFSDAMS RADGSCVFLG XXXXXXXXXXXXXXXXX MRERGRAA AVDGGCTD LWVPARGEATLVVQLRLSRRRQSWAGSQTFRISLVNLADPHAEEIAVDVSARVVTQLVSIIGLDEPPPSPISLRIYSPGTPTPSHLGPSAIRRRARSSSIEAFGSFGASEGGSLRLAPLAIPPLRGAAGRCAGSFQLKNVSGETVSV LGVTPAPEV GVLSLGASMQQDSSTGVYASVGADGRSSP VALLPGDVLDVQAECLALPGARLPPELIPPP PNLAEEGGGTEATMFGAPGTADWGQH+RLMG+VRVEIALED LDDVVPGAGG GDGGSGQEEGVLVESVALVGSLVPGPTFGLSHTSV VELRPPDSGGXXXXXDG+V YPYDPEGPATFFLESFSQS+RPVNLKLEGGGRLFLARGVRVPAAEDGXXXXXXPARV RAVTAIAEPSSLIVS EEEDRCDLFVSITDAD+PGYPPQVVSV VEVPADVVDLESEDMGGIILPGMAGPVVEDAL GGERASR SYGLSNGGEGADALGRMSPDESRKSARAR
Sbjct: 837 ADRESEIVRPLRVRNVSDRALYLTCTPNLKKQCFVYSEIPSAETSSSSSLLLSESQAPKEGSGQVGPXXXXXXXXXXXXXXXXXXXXVGG-SEWLSTVPNRPQVADLPLLPQSETTLYIGLRPVLPPEAYTAGDCRELVGGVRILGHSRTLAEATGDGERESRAGSSRSENNEGHLAPVGPSSXXXXXXXXXXXXXXXXXSAAVGTDSAGGTAVAVAATTAARPLSSPTAGXXXXXXXXXXXARPAADRLFELTIKFVGTVGVSILRLRRQSSEAFSLLAPSSGGDGLGGSGQEVVMMAGDGSAALGNVAAAAPGRGTTGDSSAGKRVVYGSLELENVTKALPLMYRFSRGGDNFRPGDDIILCDDVEGKEKEGGTAAAASRYEERIAARLRRLPAGSVELVVLAAGTGMLQPATKKSVRFGVLLNGFQGVFQRDITVENISSRNLDGANPANTDTVTHPVRLFVDDGGVLVNTNSSTSLKAPEEAVAPPPPA--LAKHRLSQGPSTIFEPLA--------NCGGHGSSSSQEAAGHLTDEGGRALPFLDTLLLPYAVAVAPCRAEAATAVPAYGESFSSSPGYSGDEYGRQRGPLLPPEEASRFRILPLVVPRKDAGGGXXXXXXX--LDDLGEMHEIEEYPEEKEPAGRRRGEPGEVVFRLTNARDRAVVLAPYSNLPVCL-TSVVETEIAGGVTDXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEETPRGPSLTRCGPAVSLPARATAVVRLCIRTGELTAPLPTAAVENGKAVGFDGIVAFARIGGDCASSVVAANGTSAAARAGLYEQQFGERRAAVPGDTRALLLPERVYCSGSGATT-GEEDNPSPEVRAPPLVKLLRAVGTFCRPRFEVVGTPNVDLGNVGHTKSRRGRRRFEVRLRSLCDTAVPVGMVGISPELEVVTDAHGGGG---DAHSKGGVYKALVPRRSAALRRNSSTASFSDAMSARADGSCVFLGGXXXXXXXXXXXXXXXXXXXMRERGRAAAAVDGGCTDMLWVPARGEATLVVQLRLSRRRQSWAGSQTFRISLVNLADPHAEEIAVDVSARVVTQLVSIIGLDEPPPSPISLRIYSPGTPTPSHLGPSAIRRRARSSSIEAFGSFGASEGGSLRLAPLAIPPLRGAAGRCAGSFQLKNVSGETVSVMLGVTPAPEVVGVLSLGASMQQDSSTGVYASVGADGRSSPPVALLPGDVLDVQAECLALPGARLPPELIPPPGPNLAEEGGGTEATMFGAPGTADWGQHMRLMGTVRVEIALED---------LDDVVPGAGGGGDGGSGQEEGVLVESVALVGSLVPGPTFGLSHTSVTVELRPPDSGGXXXXXDGDVKYPYDPEGPATFFLESFSQSMRPVNLKLEGGGRLFLARGVRVPAAEDGXXXXXXPARVVRAVTAIAEPSSLIVSATKRREVAVRLIAAAEELEEKQGKGCGGRARRAEEEGEEEDRCDLFVSITDADHPGYPPQVVSVQVEVPADVVDLESEDMGGIILPGMAGPVVEDALAGGERASRASYGLSNGGEGADALGRMSPDESRKSARAR 2443
BLAST of mRNA_Ecto-sp13_S_contig1243.2020.1 vs. uniprot
Match: A0A835YYQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ9_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.820e-24 Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 1
Query: 2767 DLGTVALDSITSSSFEVTNLSSGLP--PLRFVVMVAPKSPTNSLLLTNQQTGTVQPGESVQVSFSFHATSVGRWTHDLAVRNLGNKHDQARVS--ATVKPRMYLHFPDLDPNAKGKPEKLQIGFCYMPGLVST 3153
D+ T A S+T ++F ++N + P+++VVM+ K N+L +T QTGT+ P S V S A VGRW HD+ VRNL NKHDQA V+ ATVKP MYLHFPDLDP A GK +++QIG CY+P + T
Sbjct: 476 DISTAAR-SVTEATFTISNSCDKMEAEPVKYVVMLVAKPAGNTLTVTEHQTGTLPPKGSQDVRLSLRAAVVGRWMHDIVVRNLANKHDQATVTVTATVKPAMYLHFPDLDPAALGKLQEIQIGNCYLPPVEPT 607
BLAST of mRNA_Ecto-sp13_S_contig1243.2020.1 vs. uniprot
Match: A0A7S2F8R5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F8R5_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 3.240e-5 Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = 1
Query: 8056 IGESEDVTLYFNRSRVGVFSTYMVVKNLTNPADIKVVRVEMEVV-----EGGPKDMVSQLFEVLVS 8238
+GE ++ L F+R+ +G+FS+Y++++NL+NP D+KVVRV ME+ EGG +QLF V VS
Sbjct: 18 MGEGHNIMLKFSRADIGMFSSYLILENLSNPLDMKVVRVTMEIASLPISEGG-----NQLFNVQVS 78 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1243.2020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1243.2020.1 >prot_Ecto-sp13_S_contig1243.2020.1 ID=prot_Ecto-sp13_S_contig1243.2020.1|Name=mRNA_Ecto-sp13_S_contig1243.2020.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1530bp MSPAGAGDGSSAAVGAESAGGTVAAAAAAAARPLSSPTAGLAAAAAAAASback to top mRNA from alignment at Ecto-sp13_S_contig1243:809..18254+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1243.2020.1 ID=mRNA_Ecto-sp13_S_contig1243.2020.1|Name=mRNA_Ecto-sp13_S_contig1243.2020.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=17446bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1243:809..18254+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1243:809..18254+ >mRNA_Ecto-sp13_S_contig1243.2020.1 ID=mRNA_Ecto-sp13_S_contig1243.2020.1|Name=mRNA_Ecto-sp13_S_contig1243.2020.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=4590bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1243:809..18254+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |